From dbda88fdac6c8d56cd69c46d93d322c66d026bb8 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Mon, 5 Feb 2024 14:33:59 -0800 Subject: [PATCH 01/43] initial commit --- .gitignore | 3 +++ 1 file changed, 3 insertions(+) diff --git a/.gitignore b/.gitignore index 06a56dd9..fcb8415b 100644 --- a/.gitignore +++ b/.gitignore @@ -137,3 +137,6 @@ dmypy.json # MacOs **/.DS_Store + +# MRI stuff +.scripts/MRI_ingest/MRI_files From 4a51eb22abbc76eaf2c4c0616d90008e0bf77359 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Mon, 5 Feb 2024 14:35:12 -0800 Subject: [PATCH 02/43] initial commit --- .gitignore | 2 +- scripts/MRI_ingest/bruker2nifti/__init__.py | 19 + scripts/MRI_ingest/bruker2nifti/_cores.py | 559 ++++++++++++++ scripts/MRI_ingest/bruker2nifti/_getters.py | 351 +++++++++ scripts/MRI_ingest/bruker2nifti/_metadata.py | 186 +++++ scripts/MRI_ingest/bruker2nifti/_utils.py | 758 +++++++++++++++++++ scripts/MRI_ingest/bruker2nifti/converter.py | 218 ++++++ scripts/MRI_ingest/ingest_MRI.ipynb | 91 +++ scripts/MRI_ingest/scratch.ipynb | 111 +++ 9 files changed, 2294 insertions(+), 1 deletion(-) create mode 100644 scripts/MRI_ingest/bruker2nifti/__init__.py create mode 100644 scripts/MRI_ingest/bruker2nifti/_cores.py create mode 100644 scripts/MRI_ingest/bruker2nifti/_getters.py create mode 100644 scripts/MRI_ingest/bruker2nifti/_metadata.py create mode 100644 scripts/MRI_ingest/bruker2nifti/_utils.py create mode 100644 scripts/MRI_ingest/bruker2nifti/converter.py create mode 100644 scripts/MRI_ingest/ingest_MRI.ipynb create mode 100644 scripts/MRI_ingest/scratch.ipynb diff --git a/.gitignore b/.gitignore index fcb8415b..34a5f717 100644 --- a/.gitignore +++ b/.gitignore @@ -139,4 +139,4 @@ dmypy.json **/.DS_Store # MRI stuff -.scripts/MRI_ingest/MRI_files +scripts/MRI_ingest/MRI_files/* diff --git a/scripts/MRI_ingest/bruker2nifti/__init__.py b/scripts/MRI_ingest/bruker2nifti/__init__.py new file mode 100644 index 00000000..b0222793 --- /dev/null +++ b/scripts/MRI_ingest/bruker2nifti/__init__.py @@ -0,0 +1,19 @@ +import os +from subprocess import check_output + + +__author__ = "Sebastiano Ferraris UCL" +__licence__ = "MIT" +__repository__ = "https://github.com/SebastianoF/bruker2nifti" +__all__ = ["_cores", "_getters", "_metadata", "_utils", "converter"] + +# here = os.path.abspath(os.path.dirname(__file__)) +# git_dir = os.path.dirname(here) + +# Describe the version relative to last tag +# command_git = ['git', 'describe', '--match', 'v[0-9]*'] +# version_buf = check_output(command_git, cwd=git_dir).rstrip() + +# Exclude the 'v' for PEP440 conformity, see +# https://www.python.org/dev/peps/pep-0440/#public-version-identifiers +__version__ = "1.0.4" # version_buf[1:].decode("utf-8") diff --git a/scripts/MRI_ingest/bruker2nifti/_cores.py b/scripts/MRI_ingest/bruker2nifti/_cores.py new file mode 100644 index 00000000..f7a8dee8 --- /dev/null +++ b/scripts/MRI_ingest/bruker2nifti/_cores.py @@ -0,0 +1,559 @@ +import os +import nibabel as nib +import sys +import numpy as np +import warnings + +from os.path import join as jph + +from bruker2nifti._getters import get_list_scans, nifti_getter +from bruker2nifti._utils import ( + bruker_read_files, + normalise_b_vect, + from_dict_to_txt_sorted, + set_new_data, + apply_reorientation_to_b_vects, + obtain_b_vectors_orient_matrix, +) + + +def scan2struct( + pfo_scan, + correct_slope=True, + correct_offset=True, + sample_upside_down=False, + nifti_version=1, + qform_code=1, + sform_code=2, + get_acqp=False, + get_method=False, + get_reco=False, + frame_body_as_frame_head=False, + keep_same_det=True, + consider_subject_position=False, +): + """ + The core method of the converter has 2 parts. + 1) parsing the Bruker scan folder structure into an internal dictionary called struct. + 2) writing the information parsed in struct into folders. + ---- + scan2struct is the first part of the bridge. Info required to fill nifti header are in the visu_pars file. + The user may want to parse as well acqp, method (must when EpiDti) and reco parameter files. + Data are parsed in the intermediate dictionary struct containing the final scan(s) converted in nibabel + image, with additional infos. + :param pfo_scan: path to folder containing the scan + :param correct_slope: [True] if you want to correct the slope of the values. + :param correct_offset: [True] if you want to correct the offset of the values. + :param sample_upside_down: [False] if you want to have the sample rotated 180 around the Anterior-Posterior axis. + :param nifti_version: [1] output nifti version can be version 1 or version 2 (see nibabel documentation) + :param qform_code: [1] qform of the final nifti image + :param sform_code: [2] sform of the final nifti image + :param get_acqp: [False] if you want to parse the information in the acqp parameter file of the bruker raw data + :param get_method: [False] if you want to parse the information in the method file. Forced to True when + dealing with diffusion weighted images. + :param get_reco: [False] if you want to parse the information in the reco parameter file. + :param frame_body_as_frame_head: e.g. true if monkey, false if rat. + :param keep_same_det: impose to have in the nifti affine matrix, the same determinat as in the bruker parameter. + :param consider_subject_position : visu_pars SubjPosition can be 'Head_Prone' or 'Head_Supine'. While it may + make sense in most cases to take this value into account, in some other it may not, as it is + tuned to switch from radiological to neurological coordinate systems in a work-around. + If the subject is Prone and the technician wants to have the coordinates + in neurological he/she can consciously set the variable vc_subject_position to 'Head_Supine'. + :return: output_data data structure containing the nibabel image(s) {nib_list, visu_pars_list, acqp, method, reco} + """ + + if not os.path.isdir(pfo_scan): + raise IOError("Input folder does not exists.") + + # Get system endian_nes + system_endian_nes = sys.byteorder + + # Get sub-scans series in the same experiment. + list_sub_scans = get_list_scans(jph(pfo_scan, "pdata")) + + if not list_sub_scans: + warn_msg = ( + "\nNo sub scan in the folder structure: \n{}. \nAre you sure the input folder contains a " + "proper Bruker scan?\n".format(jph(pfo_scan, "pdata")) + ) + warnings.warn(warn_msg) + return None + + nib_scans_list = [] + visu_pars_list = [] + + for id_sub_scan in list_sub_scans: + + visu_pars = bruker_read_files("visu_pars", pfo_scan, sub_scan_num=id_sub_scan) + + if visu_pars == {}: + warn_msg = ( + "\nNo 'visu_pars' data found here: \n{}. \nAre you sure the input folder contains a " + "proper Bruker scan?\n".format(jph(pfo_scan, "pdata", id_sub_scan)) + ) + warnings.warn(warn_msg) + return None + + # In some cases we cannot deal with, VisuPars['VisuCoreSize'] can be a float. No conversion in this case. + if not ( + isinstance(visu_pars["VisuCoreSize"], np.ndarray) + or isinstance(visu_pars["VisuCoreSize"], list) + ): + warn_msg = ( + "\nWarning, VisuCoreSize in VisuPars parameter file {} \n" + "is not a list or a vector in. The study cannot be converted." + " \n".format(jph(pfo_scan, "pdata", id_sub_scan)) + ) + warnings.warn(warn_msg) + return None + + # Get data endian_nes - default big!! + if visu_pars["VisuCoreByteOrder"] == "littleEndian": + data_endian_ness = "little" + elif visu_pars["VisuCoreByteOrder"] == "bigEndian": + data_endian_ness = "big" + else: + data_endian_ness = "big" + + # Get datatype + if visu_pars["VisuCoreWordType"] == "_32BIT_SGN_INT": + dt = np.int32 + elif visu_pars["VisuCoreWordType"] == "_16BIT_SGN_INT": + dt = np.int16 + elif visu_pars["VisuCoreWordType"] == "_8BIT_UNSGN_INT": + dt = np.uint8 + elif visu_pars["VisuCoreWordType"] == "_32BIT_FLOAT": + dt = np.float32 + else: + raise IOError("Unknown data type for VisuPars VisuCoreWordType") + + # GET IMAGE VOLUME + if os.path.exists(jph(pfo_scan, "pdata", id_sub_scan, "2dseq")): + img_data_vol = np.copy( + np.fromfile(jph(pfo_scan, "pdata", id_sub_scan, "2dseq"), dtype=dt) + ) + else: + warn_msg = ( + "\nNo '2dseq' data found here: \n{}. \nAre you sure the input folder contains a " + "proper Bruker scan?\n".format(jph(pfo_scan, "pdata", id_sub_scan)) + ) + warnings.warn(warn_msg) + return None + + if not data_endian_ness == system_endian_nes: + img_data_vol.byteswap(True) + + if "VisuAcqSequenceName" in visu_pars.keys(): + visu_pars_acq_sequence_name = visu_pars["VisuAcqSequenceName"] + else: + visu_pars_acq_sequence_name = "" + + is_dwi = "dtiepi" in visu_pars_acq_sequence_name.lower() + + if is_dwi: + # Force to not correcting the slope, if true. Diffusion weighted images must be slope corrected before the + # DTI analysis. They will be to heavy otherwise. + correct_slope = False + correct_offset = False + # Force method to be parsed. Useful infos in this file to process the DWI. + get_method = True + + # ------------------------------------------------------ # + # ------ Generate the nifti image using visu_pars. ----- # + # ------------------------------------------------------ # + + nib_im = nifti_getter( + img_data_vol, + visu_pars, + correct_slope, + correct_offset, + sample_upside_down, + nifti_version, + qform_code, + sform_code, + frame_body_as_frame_head=frame_body_as_frame_head, + keep_same_det=keep_same_det, + consider_subject_position=consider_subject_position, + ) + # ------------------------------------------------------ # + # ------------------------------------------------------ # + + nib_scans_list.append(nib_im) + visu_pars_list.append(visu_pars) + + # -- Get additional data + + # Get information from method, if it exists. Parse Method parameter and erase the dictionary if unwanted + method = bruker_read_files("method", pfo_scan) + + if method == {}: + print("Warning: No 'method' file to parse.") + if "Method" in method.keys(): + acquisition_method = ( + method["Method"].replace("<", "").replace(">", "").split(":")[-1] + ) + else: + acquisition_method = "" + + if not get_method: + method = {} + + # Get information from acqp, reco, if they exist. + acqp = {} + reco = {} + + if get_acqp: + acqp = bruker_read_files("acqp", pfo_scan) + if acqp == {}: + print("Warning: No 'acqp' file to parse.") + + if get_reco: + reco = bruker_read_files("reco", pfo_scan) + if reco == {}: + print("Warning: No 'method' file to parse.") + + # -- Return data structure + struct_scan = { + "nib_scans_list": nib_scans_list, + "visu_pars_list": visu_pars_list, + "acqp": acqp, + "reco": reco, + "method": method, + "acquisition_method": acquisition_method, + } + + return struct_scan + + +def write_struct( + bruker_struct, + pfo_output, + fin_scan="", + save_human_readable=True, + save_b0_if_dwi=True, + verbose=1, + frame_body_as_frame_head=False, + keep_same_det=True, + consider_subject_position=False, +): + """ + The core method of the converter has 2 parts. + 1) parsing the Bruker scan folder structure into an internal dictionary called struct. + 2) writing the information parsed in struct into folders. + ------- + write_struct is the second part of the bridge - + :param bruker_struct: output of scan2struct + :param pfo_output: path-to-folder where the converted structure will be saved. + :param fin_scan: filename of the scan + :param save_human_readable: output data will be saved in .txt other than in numpy format. + :param save_b0_if_dwi: save the first time-point if the data is a DWI. + :param verbose: + :param frame_body_as_frame_head: according to the animal. If True monkey, if False rat-rabbit + :param keep_same_det: force the initial determinant to be the same as the final one + :param consider_subject_position: Attribute manually set, or left blank, by the lab experts. False by default + :return: save the bruker_struct parsed in scan2struct in the specified folder, with the specified parameters. + """ + + if not os.path.isdir(pfo_output): + raise IOError("Output folder does not exist.") + + if bruker_struct is None: + return + + if not len(bruker_struct["visu_pars_list"]) == len(bruker_struct["nib_scans_list"]): + raise IOError( + "Visu pars list and scans list have a different number of elements." + ) + + if fin_scan is None: + fin_scan = "" + + # -- WRITE Additional data shared by all the sub-scans: + # if the modality is a DtiEpi or Dwimage then save the DW directions, b values and b vectors in separate csv .txt. + + is_dwi = ( + "dtiepi" in bruker_struct["visu_pars_list"][0]["VisuAcqSequenceName"].lower() + or "dwi" in bruker_struct["visu_pars_list"][0]["VisuAcqSequenceName"].lower() + ) + + if ( + is_dwi + ): # File method is the same for each sub-scan. Cannot embed this in the next for cycle. + + # -- Deals with b-vector: normalise, reorient and save in external .npy/txt. + dw_grad_vec = bruker_struct["method"]["DwGradVec"] + + assert dw_grad_vec.shape[0] == bruker_struct["method"]["DwNDiffExp"] + + # get b-vectors re-orientation matrix from visu-pars + reorientation_matrix = obtain_b_vectors_orient_matrix( + bruker_struct["visu_pars_list"][0]["VisuCoreOrientation"], + bruker_struct["visu_pars_list"][0]["VisuSubjectPosition"], + frame_body_as_frame_head=frame_body_as_frame_head, + keep_same_det=keep_same_det, + consider_subject_position=consider_subject_position, + ) + + # apply reorientation + dw_grad_vec = apply_reorientation_to_b_vects(reorientation_matrix, dw_grad_vec) + # normalise: + dw_grad_vec = normalise_b_vect(dw_grad_vec) + + np.save(jph(pfo_output, fin_scan + "_DwGradVec.npy"), dw_grad_vec) + + if save_human_readable: + np.savetxt( + jph(pfo_output, fin_scan + "_DwGradVec.txt"), dw_grad_vec, fmt="%.14f" + ) + + if verbose > 0: + msg = "Diffusion weighted directions saved in " + jph( + pfo_output, fin_scan + "_DwDir.npy" + ) + print(msg) + + b_vals = bruker_struct["method"]["DwEffBval"] + b_vects = bruker_struct["method"]["DwDir"] + + np.save(jph(pfo_output, fin_scan + "_DwEffBval.npy"), b_vals) + np.save(jph(pfo_output, fin_scan + "_DwDir.npy"), b_vects) + + if save_human_readable: + np.savetxt( + jph(pfo_output, fin_scan + "_DwEffBval.txt"), b_vals, fmt="%.14f" + ) + np.savetxt(jph(pfo_output, fin_scan + "_DwDir.txt"), b_vects, fmt="%.14f") + + if verbose > 0: + print( + "B-vectors saved in {}".format( + jph(pfo_output, fin_scan + "_DwEffBval.npy") + ) + ) + print( + "B-values saved in {}".format( + jph(pfo_output, fin_scan + "_DwGradVec.npy") + ) + ) + + # save the dictionary as numpy array containing the corresponding dictionaries + # TODO use pickle instead of numpy to save the dictionaries(?) + + if not bruker_struct["acqp"] == {}: + np.save(jph(pfo_output, fin_scan + "_acqp.npy"), bruker_struct["acqp"]) + if save_human_readable: + from_dict_to_txt_sorted( + bruker_struct["acqp"], jph(pfo_output, fin_scan + "_acqp.txt") + ) + if not bruker_struct["method"] == {}: + np.save(jph(pfo_output, fin_scan + "_method.npy"), bruker_struct["method"]) + if save_human_readable: + from_dict_to_txt_sorted( + bruker_struct["method"], jph(pfo_output, fin_scan + "_method.txt") + ) + if not bruker_struct["reco"] == {}: + np.save(jph(pfo_output, fin_scan + "_reco.npy"), bruker_struct["reco"]) + if save_human_readable: + from_dict_to_txt_sorted( + bruker_struct["reco"], jph(pfo_output, fin_scan + "_reco.txt") + ) + + # Visu_pars and summary info for each sub-scan: + summary_info = {} + + for i in range(len(bruker_struct["visu_pars_list"])): + + if len(bruker_struct["nib_scans_list"]) > 1: + i_label = "_subscan_" + str(i) + "_" + else: + i_label = "_" + + # A) Save visu_pars for each sub-scan: + np.save( + jph(pfo_output, fin_scan + i_label + "visu_pars.npy"), + bruker_struct["visu_pars_list"][i], + ) + + # B) Save single slope data for each sub-scan (from visu_pars): + np.save( + jph(pfo_output, fin_scan + i_label + "slope.npy"), + bruker_struct["visu_pars_list"][i]["VisuCoreDataSlope"], + ) + + # A and B) save them both in .txt if human readable version of data is required. + if save_human_readable: + from_dict_to_txt_sorted( + bruker_struct["visu_pars_list"][i], + jph(pfo_output, fin_scan + i_label + "visu_pars.txt"), + ) + + slope = bruker_struct["visu_pars_list"][i]["VisuCoreDataSlope"] + if not isinstance(slope, np.ndarray): + slope = np.atleast_2d(slope) + np.savetxt( + jph(pfo_output, fin_scan + i_label + "slope.txt"), slope, fmt="%.14f" + ) + + # Update summary dictionary: + summary_info_i = { + i_label[1:] + + "visu_pars['VisuUid']": bruker_struct["visu_pars_list"][i]["VisuUid"], + i_label[1:] + + "visu_pars['VisuCoreDataSlope']": bruker_struct["visu_pars_list"][i][ + "VisuCoreDataSlope" + ], + i_label[1:] + + "visu_pars['VisuCoreSize']": bruker_struct["visu_pars_list"][i][ + "VisuCoreSize" + ], + i_label[1:] + + "visu_pars['VisuCoreOrientation']": bruker_struct["visu_pars_list"][i][ + "VisuCoreOrientation" + ], + i_label[1:] + + "visu_pars['VisuCorePosition']": bruker_struct["visu_pars_list"][i][ + "VisuCorePosition" + ], + } + + if len(list(bruker_struct["visu_pars_list"][i]["VisuCoreExtent"])) == 2: + # equivalent to struct['method']['SpatDimEnum'] == '2D': + if "VisuCoreSlicePacksSlices" in bruker_struct["visu_pars_list"][i].keys(): + summary_info_i.update( + { + i_label[1:] + + "visu_pars['VisuCoreSlicePacksSlices']": bruker_struct[ + "visu_pars_list" + ][i]["VisuCoreSlicePacksSlices"] + } + ) + + if ( + len(list(bruker_struct["visu_pars_list"][i]["VisuCoreExtent"])) == 3 + and "VisuCoreDiskSliceOrder" in bruker_struct["visu_pars_list"][i].keys() + ): + # first part equivalent to struct['method']['SpatDimEnum'] == '3D': + summary_info_i.update( + { + i_label[1:] + + "visu_pars['VisuCoreDiskSliceOrder']": bruker_struct[ + "visu_pars_list" + ][i]["VisuCoreDiskSliceOrder"] + } + ) + + if "VisuCreatorVersion" in bruker_struct["visu_pars_list"][i].keys(): + summary_info_i.update( + { + i_label[1:] + + "visu_pars['VisuCreatorVersion']": bruker_struct[ + "visu_pars_list" + ][i]["VisuCreatorVersion"] + } + ) + + summary_info.update(summary_info_i) + + # WRITE NIFTI IMAGES: + + if isinstance(bruker_struct["nib_scans_list"][i], list): + # the scan had sub-volumes embedded. they are saved separately + for sub_vol_id, subvol in enumerate(bruker_struct["nib_scans_list"][i]): + + if fin_scan == "": + pfi_scan = jph( + pfo_output, + "scan" + + i_label[:-1] + + "_subvol_" + + str(sub_vol_id) + + ".nii.gz", + ) + else: + pfi_scan = jph( + pfo_output, + fin_scan + + i_label[:-1] + + "_subvol_" + + str(sub_vol_id) + + ".nii.gz", + ) + + nib.save(subvol, pfi_scan) + + else: + + if fin_scan == "": + pfi_scan = jph(pfo_output, "scan" + i_label[:-1] + ".nii.gz") + else: + pfi_scan = jph(pfo_output, fin_scan + i_label[:-1] + ".nii.gz") + + nib.save(bruker_struct["nib_scans_list"][i], pfi_scan) + + if save_b0_if_dwi and is_dwi: + # save the b0, first slice alone. Optimized if you have + # NiftiSeg (http://cmictig.cs.ucl.ac.uk/wiki/index.php/NiftySeg) installed + + if fin_scan == "": + pfi_scan_b0 = jph(pfo_output, "scan" + i_label[:-1] + "_b0.nii.gz") + else: + pfi_scan_b0 = jph( + pfo_output, fin_scan + i_label[:-1] + "_b0.nii.gz" + ) + + nib.save( + set_new_data( + bruker_struct["nib_scans_list"][i], + bruker_struct["nib_scans_list"][i].get_data()[..., 0], + ), + pfi_scan_b0, + ) + if verbose > 0: + msg = "b0 scan saved alone in " + pfi_scan_b0 + print(msg) + + # complete the summary info with additional information from other parameter files, if required: + + if not bruker_struct["acqp"] == {}: + + summary_info_acqp = { + "acqp['ACQ_sw_version']": bruker_struct["acqp"]["ACQ_sw_version"], + "acqp['NR']": bruker_struct["acqp"]["NR"], + "acqp['NI']": bruker_struct["acqp"]["NI"], + "acqp['ACQ_n_echo_images']": bruker_struct["acqp"]["ACQ_n_echo_images"], + "acqp['ACQ_slice_thick']": bruker_struct["acqp"]["ACQ_slice_thick"], + } + summary_info.update(summary_info_acqp) + + if not bruker_struct["method"] == {}: + + summary_info_method = { + "method['SpatDimEnum']": bruker_struct["method"]["SpatDimEnum"], + "method['Matrix']": bruker_struct["method"]["Matrix"], + "method['SpatResol']": bruker_struct["method"]["SpatResol"], + "method['Method']": bruker_struct["method"]["Method"], + "method['SPackArrSliceOrient']": bruker_struct["method"][ + "SPackArrSliceOrient" + ], + "method['SPackArrReadOrient']": bruker_struct["method"][ + "SPackArrReadOrient" + ], + } + summary_info.update(summary_info_method) + + if not bruker_struct["reco"] == {}: + + summary_info_reco = { + "reco['RECO_size']": bruker_struct["reco"]["RECO_size"], + "reco['RECO_inp_order']": bruker_struct["reco"]["RECO_inp_order"], + } + summary_info.update(summary_info_reco) + + # Finally summary info with the updated information. + from_dict_to_txt_sorted(summary_info, jph(pfo_output, fin_scan + "_summary.txt")) + + # Get the method name in a single .txt file: + if bruker_struct["acquisition_method"] is not "": + text_file = open(jph(pfo_output, "acquisition_method.txt"), "w+") + text_file.write(bruker_struct["acquisition_method"]) + text_file.close() diff --git a/scripts/MRI_ingest/bruker2nifti/_getters.py b/scripts/MRI_ingest/bruker2nifti/_getters.py new file mode 100644 index 00000000..e693e8d7 --- /dev/null +++ b/scripts/MRI_ingest/bruker2nifti/_getters.py @@ -0,0 +1,351 @@ +import os +import nibabel as nib +import numpy as np + +from bruker2nifti._utils import ( + bruker_read_files, + eliminate_consecutive_duplicates, + data_corrector, + compute_affine_from_visu_pars, + compute_resolution_from_visu_pars, +) + + +def get_list_scans(start_path, print_structure=True): + """ + Given a path containing scans (pfo_study) or sub-scans (join(pfo_study, 'pdata')), + finds the list of the names of the scans. + :param start_path: path to the folder containing scans or sub-scans. + :param print_structure: [True] optional if you want to visualise the structure data at console + :return: list of scans/sub_scans names. + """ + + scans_list = [] + + for dirpath, dirnames, filenames in os.walk(start_path): + + if dirpath == start_path: + scans_list = [d for d in dirnames if d.isdigit()] + + level = dirpath.replace(start_path, "").count(os.sep) + indent = (" " * 4) * level + if print_structure: + print("{}{}/".format(indent, os.path.basename(dirpath))) + + sub_indent = (" " * 4) * (level + 1) + + if print_structure: + for f in filenames: + print("{}{}".format(sub_indent, f)) + + scans_list.sort(key=float) + return scans_list + + +def get_subject_name(pfo_study): + """ + :param pfo_study: path to study folder. + :return: name of the subject in the study. See get_subject_id. + """ + # (1) 'subject' at the study level is present + if os.path.exists(os.path.join(pfo_study, "subject")): + subject = bruker_read_files("subject", pfo_study) + return subject["SUBJECT_id"] + # (2) 'subject' at the study level is not present, we use 'VisuSubjectId' from visu_pars of the first scan. + # Longer solution as at the end 'visu_pars' will be unavoidably scanned twice. + else: + list_scans = get_list_scans(pfo_study) + visu_pars = bruker_read_files( + "visu_pars", pfo_study, sub_scan_num=list_scans[0] + ) + return visu_pars["VisuSubjectId"] + + +def get_stack_direction_from_VisuCorePosition(visu_core_position, num_sub_volumes=1): + """ + To be used when the acquisition is 2D: it returns the stack orientation and direction encoded in a string. + + :param visu_core_position: visu_pars parameter file parsed into a dictionary. + :param num_sub_volumes: [1] for when there is more than one volume embedded in the same scan + (see num_vols variable of the method nifti_getter) + :return: stack direction and axis of the 2D image. If more than one sub-volume is included, returns + the sequence of string-encoded orientations and directions. + ---------- + Example: + + visu_core_position -> corresponding output: + [[ -4. -20. 20.] [ -2. -20. 20.] [ 0. -20. 20.] [ 2. -20. 20.] [ 4. -20. 20.]] -> 'x+' + [[ 4. -20. 20.] [ 2. -20. 20.] [ 0. -20. 20.] [ -2. -20. 20.] [-4. -20. 20.]] -> 'x-' + [[-20. -4. 20.] [-20. -2. 20.] [-20. 0. 20.] [-20. 2. 20.] [-20. 4. 20.]] -> 'y+' + [[-20. 4. 20.] [-20. 2. 20.] [-20. 0. 20.] [-20. -2. 20.] [-20. -4. 20.]] -> 'y-' + [[-20. -20. -4.] [-20. -20. -2.] [-20. -20. 0.] [-20. -20. 2.] [-20. -20. 4.]] -> 'z+' + [[-20. -20. 4.] [-20. -20. 2.] [-20. -20. 0.] [-20. -20. -2.] [-20. -20. -4.]] -> 'z-' + + visu_core_position = [[-20. -20. -4.] + [-20. -20. -2.] + [-20. -20. 0.] + [-20. -20. 2.] + [-20. -20. 4.] + [ 4. -20. 20.] + [ 2. -20. 20.] + [ 0. -20. 20.] + [ -2. -20. 20.] + [ -4. -20. 20.]] + num_sub_volumes = 2 -> 'z-x-' + + """ + sh = visu_core_position.shape + if not len(sh) == 2: + msg = "The input VisuCorePosition must be from a 2D acquisition. Input shape {}".format( + sh + ) + raise IOError(msg) + if not sh[0] > 1: + msg = ( + "The input VisuCorePosition must be from a 2D acquisition. Needs to have more than one row. " + "Input shape {}".format(sh) + ) + raise IOError(msg) + + rows, cols = sh + if not cols == 3: + raise IOError("VisuCorePosition should have three columns.") + + slices_per_vol, reminder = int(rows // num_sub_volumes), rows % num_sub_volumes + if not reminder == 0: + raise IOError("Number of subvolumes not compatible with VisuCorePosition.") + + res = "" + for v in range(num_sub_volumes): + first_slice_each_vol = slices_per_vol * v + s_diff = ( + visu_core_position[first_slice_each_vol + 1, :] + - visu_core_position[first_slice_each_vol, :] + ) + pos = [i for i in range(3) if np.abs(s_diff[i]) > 0][0] + val = s_diff[pos] + if pos == 0: + res += "x" + elif pos == 1: + res += "y" + elif pos == 2: + res += "z" + if val > 0: + res += "+" + else: + res += "-" + return res + + +def nifti_getter( + img_data_vol, + visu_pars, + correct_slope, + correct_offset, + sample_upside_down, + nifti_version, + qform_code, + sform_code, + frame_body_as_frame_head=False, + keep_same_det=True, + consider_subject_position=False, +): + """ + Passage method to get a nifti image from the volume and the element contained into visu_pars. + :param img_data_vol: volume of the image. + :param visu_pars: corresponding dictionary to the 'visu_pars' data file. + :param correct_slope: [True/False] if you want to correct the slope. + :param correct_offset: [True/False] if you want to correct the offset. + :param sample_upside_down: [True/False] if you want to have the sample rotated 180 around the Ant-Post axis. + :param nifti_version: [1/2] according to the required nifti output + :param qform_code: required nifti ouptut qform code. + :param sform_code: required nifti ouput sform code + :param frame_body_as_frame_head: [True/False] if the frame is the same for head and body [monkey] or not [mouse]. + :param keep_same_det: flag to constrain the determinant to be as the one provided into the orientation parameter. + :param consider_subject_position: [False] if taking into account the 'Head_prone' 'Head_supine' input. + :return: + """ + # Check units of measurements: + if not ["mm"] * len(visu_pars["VisuCoreSize"]) == visu_pars["VisuCoreUnits"]: + # if the UoM is not mm, change here. Add other measurements and refer to xyzt_units from nibabel convention. + print( + "Warning, measurement not in mm. This version of the converter deals with data in mm only." + ) + + # get pre-shape and re-shape volume: (pre-shape is the shape compatible with the slope). + vol_pre_shape = [int(i) for i in visu_pars["VisuCoreSize"]] + if int(visu_pars["VisuCoreFrameCount"]) > 1: + vol_pre_shape += [int(visu_pars["VisuCoreFrameCount"])] + + if np.prod(vol_pre_shape) == img_data_vol.shape[0]: + vol_data = img_data_vol.reshape(vol_pre_shape, order="F") + else: + echo = img_data_vol.shape[0] / np.prod(vol_pre_shape) + vol_pre_shape += [echo] + vol_pre_shape = [int(k) for k in vol_pre_shape] + vol_data = img_data_vol.reshape(vol_pre_shape, order="F") + + # correct slope if required + if correct_slope: + vol_data = data_corrector( + vol_data, visu_pars["VisuCoreDataSlope"], kind="slope" + ) + # correct offset (AFTER slope) if required + if correct_offset: + vol_data = data_corrector( + vol_data, visu_pars["VisuCoreDataOffs"], kind="offset" + ) + + # get number sub-volumes + num_sub_volumes = len( + eliminate_consecutive_duplicates(list(visu_pars["VisuCoreOrientation"])) + ) + + if num_sub_volumes > 1: + + output_nifti = [] + + assert vol_pre_shape[2] % num_sub_volumes == 0 + vol_shape = ( + vol_pre_shape[0], + vol_pre_shape[1], + int(vol_pre_shape[2] / num_sub_volumes), + ) + + # get resolution - same for all sub-volumes. + resolution = compute_resolution_from_visu_pars( + visu_pars["VisuCoreExtent"], + visu_pars["VisuCoreSize"], + visu_pars["VisuCoreFrameThickness"], + ) + + for id_sub_vol in range(num_sub_volumes): + + # compute affine + affine_transf = compute_affine_from_visu_pars( + list(visu_pars["VisuCoreOrientation"])[id_sub_vol * vol_shape[2]], + list(visu_pars["VisuCorePosition"])[id_sub_vol * vol_shape[2]], + visu_pars["VisuSubjectPosition"], + resolution, + frame_body_as_frame_head=frame_body_as_frame_head, + keep_same_det=keep_same_det, + consider_subject_position=consider_subject_position, + ) + + if sample_upside_down: + affine_transf = affine_transf.dot(np.diag([-1, 1, -1, 1])) + + # get sub volume in the correct shape + img_data_sub_vol = vol_data[ + ..., id_sub_vol * vol_shape[2] : (id_sub_vol + 1) * vol_shape[2] + ] + + if nifti_version == 1: + nib_im_sub_vol = nib.Nifti1Image(img_data_sub_vol, affine=affine_transf) + elif nifti_version == 2: + nib_im_sub_vol = nib.Nifti2Image(img_data_sub_vol, affine=affine_transf) + else: + raise IOError("Nifti versions allowed are 1 or 2.") + + hdr_sub_vol = nib_im_sub_vol.header + hdr_sub_vol.set_qform(affine_transf, code=qform_code) + hdr_sub_vol.set_sform(affine_transf, code=sform_code) + hdr_sub_vol["xyzt_units"] = 10 # default mm, seconds + nib_im_sub_vol.update_header() + + output_nifti.append(nib_im_sub_vol) + + else: + + # get shape + sh = vol_pre_shape + + # check for frame groups: -- Very convoluted scaffolding. Waiting to have more infos to refactor this part. + # ideally an external function read VisuFGOrderDesc should provide the sh and the choice between # A and # B + # while testing for exception. + + if "VisuFGOrderDescDim" in visu_pars.keys(): # see manuals D-2-73 + if visu_pars["VisuFGOrderDescDim"] > 0: + if isinstance(visu_pars["VisuFGOrderDesc"], list): + if len(visu_pars["VisuFGOrderDesc"]) > 1: + descr = visu_pars["VisuFGOrderDesc"][:] + # sort descr so that FG_SLICE is the first one, all the others came as they are after swapping. + fg_slice_pos = -1 + fg_echo = -1 + fg_movie = -1 + for d in range(len(descr)): + if "" in descr[d]: + fg_slice_pos = d + if "" in descr[d]: + fg_echo = d + if "" in descr[d]: + fg_movie = d + if fg_slice_pos == -1: + raise IOError( + "FG_SLICE not found in the order descriptor, can not tell the ordering." + ) + + descr[fg_slice_pos], descr[0] = descr[0], descr[fg_slice_pos] + + dims = [] + for dd in descr: + dims.append( + int(dd.replace("(", "").replace(")", "").split(",")[0]) + ) + + if np.prod(dims) == sh[-1]: + sh = vol_pre_shape[:-1] + dims + # A + if fg_echo > -1: + # MSME + stack_data = np.zeros(sh, dtype=vol_data.dtype) + for t in range(sh[3]): + for z in range(sh[2]): + stack_data[:, :, z, t] = vol_data[ + :, :, z * sh[3] + t + ] + + vol_data = np.copy(stack_data) + # B + elif fg_movie > -1: + # DTI + vol_data = vol_data.reshape(sh, order="F") + else: + # Else ? + vol_data = vol_data.reshape(sh, order="F") + + # get resolution + resolution = compute_resolution_from_visu_pars( + visu_pars["VisuCoreExtent"], + visu_pars["VisuCoreSize"], + visu_pars["VisuCoreFrameThickness"], + ) + + # compute affine + affine_transf = compute_affine_from_visu_pars( + list(visu_pars["VisuCoreOrientation"])[0], + list(visu_pars["VisuCorePosition"])[0], + visu_pars["VisuSubjectPosition"], + resolution, + frame_body_as_frame_head=frame_body_as_frame_head, + keep_same_det=keep_same_det, + consider_subject_position=consider_subject_position, + ) + + if sample_upside_down: + affine_transf = affine_transf.dot(np.diag([-1, 1, -1, 1])) + + if nifti_version == 1: + output_nifti = nib.Nifti1Image(vol_data, affine=affine_transf) + elif nifti_version == 2: + output_nifti = nib.Nifti2Image(vol_data, affine=affine_transf) + else: + raise IOError("Nifti versions allowed are 1 or 2.") + + hdr_sub_vol = output_nifti.header + hdr_sub_vol.set_qform(affine_transf, code=qform_code) + hdr_sub_vol.set_sform(affine_transf, code=sform_code) + hdr_sub_vol["xyzt_units"] = 10 + output_nifti.update_header() + + return output_nifti diff --git a/scripts/MRI_ingest/bruker2nifti/_metadata.py b/scripts/MRI_ingest/bruker2nifti/_metadata.py new file mode 100644 index 00000000..824a4a70 --- /dev/null +++ b/scripts/MRI_ingest/bruker2nifti/_metadata.py @@ -0,0 +1,186 @@ +""" +Provides the BrukerMetadata class for reading Bruker MRI metadata. + +The BrukerMetadata class should be instantiated for each study. Dictionaries +are structured as follows: + +subject_data { + [key_from_subject_file]: [corresponding_value] +} + +scan_data { + [scan_number]: { + 'acqp': { [key_from_acqp_file]: [corresponding_value] }, + 'method': { [key_from_method_file]: [corresponding_value] }, + 'recons': { + [recon_number]: { + 'reco': { [key_from_reco_file]: [corresponding_value] }, + 'visu_pars': { [key_from_visu_pars_file]: [corresponding_value] } + } + } + } +} + +parse_subject() creates the subject_data dictionary and stores it in the object +parse_scans() creates the scan_data dictionary and stores it in the object + +read_subject() returns a subject_data dictionary +read_scans() returns a scan_data dictionary +read_scan() returns the sub-dictionary corresponding to [scan_number] +read_recons() returns the sub-citionary corresponding to 'recons' for a given + [scan_number] +read_recon() returns the sub-dictionary corresponding to [recon_number] for a + given [scan_number] + +list_scans() returns a list of scan numbers +list_recons() returns a list of recon numbers for a given scan +""" +import os + +import bruker2nifti._utils as utils + + +class BrukerMetadata(object): + """Represents metadata associated with a given MRI study.""" + + def __init__(self, study): + """ + Initialises a new object with the location of the study. + + self.pfo_input stores the path to the root directory of a give MRI + study. The path is not checked for validity during initialisation. + """ + self.pfo_input = study + self.subject_data = None + self.scan_data = None + + def parse_subject(self): + """ + Stores subject metadata in the object. + + Reads the 'subject' file within the MRI study folder stores the + metadata in `self.subject_data`. + """ + self.subject_data = self.read_subject() + + def parse_scans(self): + """ + Stores scan metadata in the object. + + Reads all 'acqp', 'method', 'reco' and 'visu_pars' files to get all + scan metadata and store it in `self.study_data`. + """ + self.scan_data = self.read_scans() + + def read_subject(self): + """ + Reads metadata from the 'subject' file and returns a dictionary. + + Reads the 'subject' metadata file within the root study folder. It + populates a dictionary with the data where keys correspond to variables + within the source file (minus any ##/$/PVM_ decorators). + """ + return utils.bruker_read_files("subject", self.pfo_input) + + def read_scans(self): + """ + Reads metadata for all scans of a study and returns a dictionary. + + Reads all 'acqp', 'method', 'reco' and 'visu_pars' files for the study + and returns a nested dictionary containing all variables and their + values specified in those files. + """ + return {scan: self.read_scan(scan) for scan in self.list_scans()} + + def read_scan(self, scan): + """ + Reads the metadata for a specified scan and returns a dictionary. + + Reads 'acqp', 'method' and all 'reco' and 'visu_pars' files for a given + scan and its reconstructions. A dictionary of these values is returned. + The top level keys are 'acqp', 'method' and 'recons' where 'recons' is + sub-keyed with individual recon numbers, each of which is in turn keyed + with 'reco' and 'visu_pars'. Beneath the appropriate key is a + sub-dictionary keyed with variables from the source file (minus and + ##/$/PVM_ decorators). + """ + scan_data = {} + data_path = os.path.join(self.pfo_input, scan) + scan_data["acqp"] = utils.bruker_read_files("acqp", data_path) + scan_data["method"] = utils.bruker_read_files("method", data_path) + scan_data["recons"] = self.read_recons(scan) + return scan_data + + def read_recons(self, scan): + """ + Reads the metadata for all recons and returns a dictionary. + + Reads 'reco' and 'visu_pars' files from all recon sub-folders for the + given scan. The metadata is stored in a dictionary with top level + keys corresponding to reconstruction numbers. + """ + recon_data = {} + for recon in self.list_recons(scan): + recon_data[recon] = self.read_recon(scan, recon) + return recon_data + + def read_recon(self, scan, recon): + """ + Reads the metadata from a specified recon and returns a dictionary. + + Reads the 'reco' and 'visu_pars' files from within a specific + reconstruction sub-directory and compiles a dictionary. At the top + level the dictionary has keys corresponding to the two files and then + the sub-dictionaries are keyed according to variables in the relevant + file (minus any ##/$/PVM_ decorators). + """ + recon_data = {} + data_path = os.path.join(self.pfo_input, scan) + recon_data["reco"] = utils.bruker_read_files("reco", data_path, recon) + recon_data["visu_pars"] = utils.bruker_read_files("visu_pars", data_path, recon) + return recon_data + + def list_scans(self): + """ + Returns a list of scans that comprise this study. + + Returns a list of strings corresponding to the numbered sub-directories + of the root study folder. Each of these sub-directories stores data for + an individual scan. + + Note this function doesn't read the contents of the scan directories to + confirm that they contain valid scan data. + """ + return self._list_subdirs(self.pfo_input) + + def list_recons(self, scan): + """ + Returns a list of recons for a given scan within this study. + + Returns a list of strings corresponding to the numbered sub-directories + of the pdata sub-directory within the scan folder. Each of these + sub-directories stores data for an individual reconstruction. + + Note this function doesn't read the contents of the reconstruction + directories to confirm that they contain valid reconstruction data. + """ + pfo_recons = os.path.join(self.pfo_input, scan, "pdata") + return self._list_subdirs(pfo_recons) + + def _list_subdirs(self, path): + """ + Return a list of scan or reconstruction sub-directories. + + Return a sorted list of strings corresponding to sub-directories of the + given path that could be either a scan or reconstruction. This is based + on the bruker convention of naming these as an integer. + + Note this function does not read the contents of directories to confirm + that they contain scan or reconstruction data. + """ + dirs = [ + d + for d in os.listdir(path) + if os.path.isdir(os.path.join(path, d)) and d.isdigit() + ] + return sorted(dirs, key=int) diff --git a/scripts/MRI_ingest/bruker2nifti/_utils.py b/scripts/MRI_ingest/bruker2nifti/_utils.py new file mode 100644 index 00000000..0352dad0 --- /dev/null +++ b/scripts/MRI_ingest/bruker2nifti/_utils.py @@ -0,0 +1,758 @@ +import numpy as np +import os +import nibabel as nib +import re +import warnings +from os.path import join as jph + + +# --- text-files utils --- + + +def unique_words_in_string(in_string): + ulist = [] + [ulist.append(s) for s in in_string.split() if s not in ulist] + return ulist[0] + + +def indians_file_parser(s, sh=None): + """ + An here-called indians file is a string obtained from a sequence of rows from a Bruker parameter file + whose shape needs to be changed, in function of its content and according to an optional parameter sh + that defines the shape of the output. + This function transform the indian file in a data structure, + according to the information that can be parsed in the file: + A - list of vectors transformed into a list + B - list of numbers, transformed into a np.ndarray, or single number stored as a float. + B bis - string of 'inf' repeated n times that will be transformed in a numpy array of 'inf'. + C - list of strings separated by <>. + D - everything else becomes a string. + + :param s: string indian file + :param sh: shape related + :return: parsed indian file of adequate output. + """ + + s = s.strip() # removes initial and final spaces. + + # A + if ("(" in s) and (")" in s): + s = s[1:-1] # removes initial and final ( ) + a = ["(" + v + ")" for v in s.split(") (")] + # B + elif ( + s.replace("-", "").replace(".", "").replace(" ", "").replace("e", "").isdigit() + ): + if " " in s: + a = np.array([float(x) for x in s.split()]) + if sh is not None: + a = a.reshape(sh) + else: + a = float(s) + # B-bis + elif "inf" in s: + if "inf" == unique_words_in_string(s): + num_occurrences = sum("inf" == word for word in s.split()) + a = [np.inf] * num_occurrences + else: + a = s[:] + # C + elif ("<" in s) and (">" in s): + s = s[1:-1] # removes initial and final < > + a = [v for v in s.split("> <")] + # D + else: + a = s[:] + + # added to work with ParaVision vers 6.0.1: + if isinstance(a, list): + if len(a) == 1: + a = a[0] + + return a + + +def var_name_clean(line_in): + """ + Removes #, $ and PVM_ from line_in, where line in is a string from a Bruker parameter list file. + :param line_in: input string + :return: output string cleaned from #, $ and PVM_ + """ + line_out = line_in.replace("#", "").replace("$", "").replace("PVM_", "").strip() + return line_out + + +def from_dict_to_txt_sorted(dict_input, pfi_output): + """ + Simple auxiliary to save the information contained in a dictionary into a txt file + at the specified path to file (pfi). + :param dict_input: input structure dictionary + :param pfi_output: path to file. + :return: + """ + sorted_keys = sorted(dict_input.keys()) + + with open(pfi_output, "w") as f: + f.writelines("{0} = {1} \n".format(k, dict_input[k]) for k in sorted_keys) + + +def bruker_read_files(param_file, data_path, sub_scan_num="1"): + """ + Reads parameters files of from Bruker raw data imaging format. + It parses the files 'acqp', 'method', 'reco', 'visu_pars' and 'subject'. + Even if only 'visu_pars' is relevant for the conversion to nifti, having a more general parser has turned out + to be useful in many cases (e.g. in PV5.1 to check). + :param param_file: file parameter, must be a string in the list ['acqp', 'method', 'reco', 'visu_pars', 'subject']. + :param data_path: path to data. + :param sub_scan_num: number of the sub-scan folder where usually the 'reco' and 'visu_pars' parameter files + are stored. + :return: dict_info dictionary with the parsed information from the input file. + """ + if param_file.lower() == "reco": + if os.path.exists(jph(data_path, "pdata", str(sub_scan_num), "reco")): + f = open(jph(data_path, "pdata", str(sub_scan_num), "reco"), "r") + else: + print( + "File {} does not exist".format( + jph(data_path, "pdata", str(sub_scan_num), "reco") + ) + ) + return {} + elif param_file.lower() == "acqp": + if os.path.exists(jph(data_path, "acqp")): + f = open(jph(data_path, "acqp"), "r") + else: + print("File {} does not exist".format(jph(data_path, "acqp"))) + return {} + elif param_file.lower() == "method": + if os.path.exists(jph(data_path, "method")): + f = open(jph(data_path, "method"), "r") + else: + print("File {} does not exist".format(jph(data_path, "method"))) + return {} + elif param_file.lower() == "visu_pars": + if os.path.exists(jph(data_path, "pdata", str(sub_scan_num), "visu_pars")): + f = open(jph(data_path, "pdata", str(sub_scan_num), "visu_pars"), "r") + elif os.path.exists( + jph(data_path, str(sub_scan_num), "pdata", "1", "visu_pars") + ): + f = open(jph(data_path, str(sub_scan_num), "pdata", "1", "visu_pars"), "r") + else: + print( + "File {} does not exist".format( + jph(data_path, "pdata", str(sub_scan_num), "visu_pars") + ) + ) + return {} + elif param_file.lower() == "subject": + if os.path.exists(jph(data_path, "subject")): + f = open(jph(data_path, "subject"), "r") + else: + print("File {} does not exist".format(jph(data_path, "subject"))) + return {} + else: + raise IOError( + "param_file input must be the string 'reco', 'acqp', 'method', 'visu_pars' or 'subject'" + ) + + dict_info = {} + lines = f.readlines() + + for line_num in range(len(lines)): + """ + Relevant information are in the lines with '##'. + For the parameters that have arrays values specified between (), with values in the next line. + Values in the next line can be parsed in lists or np.ndarray when they contains also characters or numbers. + """ + + line_in = lines[line_num] + + if "##" in line_in: + + if ("$" in line_in) and ("(" in line_in) and ("<" not in line_in): + # A: + splitted_line = line_in.split("=") + # name of the variable contained in the row, and shape: + var_name = var_name_clean(splitted_line[0][3:]) + + done = False + indian_file = "" + pos = line_num + sh = splitted_line[1] + # this is not the shape of the vector but the beginning of a full vector. + if sh.replace(" ", "").endswith(",\n"): + sh = sh.replace("(", "").replace(")", "").replace("\n", "").strip() + indian_file += sh + sh = None + # this is not the shape of the vector but a full vector. + elif sh.replace(" ", "").endswith(")\n") and "." in sh: + sh = sh.replace("(", "").replace(")", "").replace("\n", "").strip() + indian_file += sh + sh = None + # this is finally the shape of the vector that will start in the next line. + else: + sh = sh.replace("(", "").replace(")", "").replace("\n", "").strip() + sh = [int(num) for num in sh.split(",")] + + while not done: + + pos += 1 + # collect the indian file: info related to the same variables that can appears on multiple rows. + line_to_explore = lines[ + pos + ] # tell seek does not work in the line iterators... + + if ("##" in line_to_explore) or ("$$" in line_to_explore): + # indian file is over + done = True + + else: + # we store the rows in the indian file all in the same string. + indian_file += line_to_explore.replace("\n", "").strip() + " " + + dict_info[var_name] = indians_file_parser(indian_file, sh) + + elif ("$" in line_in) and ("(" not in line_in): + # B: + splitted_line = line_in.split("=") + var_name = var_name_clean(splitted_line[0][3:]) + indian_file = splitted_line[1] + + dict_info[var_name] = indians_file_parser(indian_file) + + elif ("$" not in line_in) and ("(" in line_in): + # C: + splitted_line = line_in.split("=") + var_name = var_name_clean(splitted_line[0][2:]) + + done = False + indian_file = splitted_line[1].strip() + " " + pos = line_num + + while not done: + pos += 1 + # collect the indian file: info related to the same variables that can appears on multiple rows. + line_to_explore = lines[ + pos + ] # tell seek does not work in the line iterators... + if ("##" in line_to_explore) or ("$$" in line_to_explore): + # indian file is over + done = True + else: + # we store the rows in the indian file all in the same string. + indian_file += line_to_explore.replace("\n", "").strip() + " " + + dict_info[var_name] = indians_file_parser(indian_file) + + elif ("$" not in line_in) and ("(" not in line_in): + # D: + splitted_line = line_in.split("=") + var_name = var_name_clean(splitted_line[0]) + indian_file = splitted_line[1].replace("=", "").strip() + dict_info[var_name] = indians_file_parser(indian_file) + + else: + # General case: take it as a simple string. + splitted_line = line_in.split("=") + var_name = var_name_clean(splitted_line[0]) + dict_info[var_name] = ( + splitted_line[1] + .replace("(", "") + .replace(")", "") + .replace("\n", "") + .replace("<", "") + .replace(">", "") + .replace(",", " ") + .strip() + ) + + else: + # line does not contain any 'assignable' variable, so this information is not included in the info. + pass + + return dict_info + + +# --- Slope correction utils --- + + +def eliminate_consecutive_duplicates(input_list): + """ + Simple funcion to eliminate consecutive duplicates in a list or arrays or in a list of numbers. + :param input_list: list with possible consecutive duplicates. + :return: input_list with no consecutive duplicates. + """ + if isinstance(input_list[0], np.ndarray): + output_list = [input_list[0]] + for k in input_list[1:]: + if not list(k) == list(output_list[-1]): + output_list.append(k) + return output_list + else: + output_list = [input_list[0]] + for i in range(1, len(input_list)): + if not input_list[i] == input_list[i - 1]: + output_list.append(input_list[i]) + return output_list + + +def data_corrector( + data, factors, kind="slope", num_initial_dir_to_skip=None, dtype=np.float64 +): + """ + Slope is a float or a vector that needs to be multiplied to the data, to obtain the data as they are acquired. + To reduce the weight of an image, each slice can be divided by a common float factor, so that at each voxel only the + integer remaining is stored: + + real_value_acquired[slice_j][x] = data_integer_reminder[slice_j][x] * float_slope[slice_j][x] + + (where = is an almost equal, where the small loss of accuracy is justified by the huge amount of space saved) + + :param data: data as parsed from the data structure. + :param factors: can be the slope or the offset as parsed from the data structure + :param kind: is a string that can be 'slope' (multiplicative factor) or 'offset' additive factor. + :param num_initial_dir_to_skip: in some cases (as some DWI) the number of slices in the image is higher than the + provided slope/offset length. Usually it is because the initial directions have no weighted and the first element + in the slope/offset can correct them all. If num_initial_direction_to_skip=j the slope/offset correction starts + after j slices, and the initial j timepoint are trimmed by j. + :param dtype: [np.float64] output datatype. + :return: data after the slope/offset correction. + --- + NOTE 1: if used in sequence to correct for slope and offset, correct FIRST slope, then OFFSET. + NOTE 2: when read 'factor' think slope or offset. The two are embeded in the same method to avoid code repetition. + """ + + if len(data.shape) > 5: + raise IOError( + "4d or lower dimensional images allowed. Input data has shape {} ".format( + data.shape + ) + ) + assert kind in ("slope", "offset") + + if hasattr(factors, "__contains__"): + if np.inf in factors: + warnings.warn( + "bruker2nifti - Vector corresponding to {} has some inf values. Can not correct it.".format( + kind + ), + UserWarning, + ) + return data + + data = data.astype(dtype) + + if num_initial_dir_to_skip is not None: + factors = factors[num_initial_dir_to_skip:] + data = data[..., num_initial_dir_to_skip:] + + # Check compatibility slope and data and if necessarily correct for possible consecutive duplicates + # (as in some cases, when the size of the slope is larger than any timepoint or spatial point, the problem can + # be in the fact that there are duplicates in the slope vector. This has been seein only in PV5.1). + if not (isinstance(factors, int) or isinstance(factors, float)): + if factors.ndim == 1: + if ( + not factors.size == data.shape[-1] + and not factors.size == data.shape[-2] + ): + factors = np.array( + eliminate_consecutive_duplicates(list(factors)), dtype=np.float64 + ) + if ( + not factors.size == data.shape[-1] + and not factors.size == data.shape[-2] + ): + msg = "Slope shape {0} and data shape {1} appears to be not compatible".format( + factors.shape, data.shape + ) + raise IOError(msg) + + if isinstance(factors, int) or isinstance(factors, float): + # scalar slope/offset times nd array data + if kind == "slope": + data *= factors + elif kind == "offset": + data += factors + + elif factors.size == 1: + # scalar slope/offset embedded in a singleton times nd array data + if kind == "slope": + data *= factors[0] + else: + data += factors[0] + + elif len(data.shape) == 3 and len(factors.shape) == 1: + # each slice of the 3d image is multiplied an element of the slope consecutively + if data.shape[2] == factors.shape[0]: + for t, fa in enumerate(factors): + if kind == "slope": + data[..., t] = data[..., t] * fa + elif kind == "offset": + data[..., t] = data[..., t] + fa + else: + raise IOError( + "Shape of the 2d image and slope dimensions are not consistent" + ) + + elif ( + len(data.shape) == 4 + and len(factors.shape) == 1 + and factors.shape[0] == data.shape[2] + ): + # each slice of the 4d image, taken from the third dim, is multiplied by each element of the slope in sequence. + if factors.size == data.shape[2]: + for t in range(data.shape[3]): + for k in range(factors.size): + if kind == "slope": + data[..., k, t] = data[..., k, t] * factors[k] + elif kind == "offset": + data[..., k, t] = data[..., k, t] + factors[k] + else: + raise IOError( + "If you are here, your case cannot be converted. Further investigations required." + ) + + elif ( + len(data.shape) == 5 + and len(factors.shape) == 1 + and factors.shape[0] == data.shape[3] + ): + # each slice of the 5d image, taken from the fourth dim, is multiplied by each element of the slope in sequence. + if factors.size == data.shape[3]: + for t in range(data.shape[4]): + for k in range(factors.size): + if kind == "slope": + data[..., k, t] = data[..., k, t] * factors[k] + elif kind == "offset": + data[..., k, t] = data[..., k, t] + factors[k] + else: + raise IOError( + "If you are here, your case cannot be converted. Further investigations required." + ) + + else: + # each slice of the nd image, taken from the last dimension, is multiplied by each element of the slope. + if factors.size == data.shape[-1]: + for t in range(data.shape[-1]): + if kind == "slope": + data[..., t] = data[..., t] * factors[t] + elif kind == "offset": + data[..., t] = data[..., t] + factors[t] + else: + msg = "Slope shape {0} and data shape {1} appears to be not compatible".format( + factors.shape, data.shape + ) + raise IOError(msg) + + return data + + +# -- nifti affine matrix utils -- + + +def compute_resolution_from_visu_pars(vc_extent, vc_size, vc_frame_thickness): + """ + Resolution parameter is provided as a vector in the 'reco' parameter file. To extract the information from the + 'visu_pars' only, as some scans can lack the reco file, some computation on its paramteres neesd to be performed. + :param vc_extent: VisuCoreExtent parameter file from 'visu_pars'. + :param vc_size: VisuCoreSize parameter file from 'visu_pars'. + :param vc_frame_thickness: VisuCoreFrameThickness parameter file from 'visu_pars'. + :return: + """ + + if len(vc_extent) == len(vc_size): + resolution = [e / float(s) for e, s in zip(vc_extent, vc_size)] + else: + raise IOError + + if isinstance(vc_frame_thickness, np.ndarray) or isinstance( + vc_frame_thickness, list + ): + vc_frame_thickness = vc_frame_thickness[0] + + if len(vc_extent) == 2: + resolution += [vc_frame_thickness] + return resolution + elif len(vc_extent) == 3: + return resolution + else: + raise IOError + + +def sanity_check_visu_core_subject_position(vc_subject_position): + """ + The parameter VisuCoreSubjectPosition can be 'Head_Prone' or 'Head_Supine'. Tertium non datur. + :param vc_subject_position: VisuCoreSubjectPosition from 'visu_pars' + :return: Raise error if VisuCoreSubjectPosition is not 'Head_Prone' or 'Head_Supine' + """ + if vc_subject_position not in ["Head_Prone", "Head_Supine"]: + msg = "Known cases are 'Head_Prone' or 'Head_Supine' for the parameter 'visu_pars.VisuSubjectPosition." + raise IOError(msg) + + +def filter_orientation(visu_parse_orientation): + """ + Pre-process the paramter value VisuParseOrientation from the 'visu_pars' paramter file. + :param visu_parse_orientation: VisuParseOrientation from the 'visu_pars' paramter file. + :return: re-shaped and rounded VisuParseOrientation parameter. + """ + + if not np.prod(visu_parse_orientation.shape) == 9: + # Take the first 9 elements: + visu_parse_orientation = visu_parse_orientation.flat[:9] + + ans = np.around(visu_parse_orientation.reshape([3, 3], order="F"), decimals=4) + return ans + + +def pivot(v): + """ + :param v: vector or list + :return: max in absolute value with original sign or max from origin. + Corresponds to the main direction for each column of an orientation matrix. + """ + return v[list(abs(v)).index(abs(v).max())] + + +def compute_affine_from_visu_pars( + vc_orientation, + vc_position, + vc_subject_position, + resolution, + frame_body_as_frame_head=False, + keep_same_det=True, + consider_subject_position=False, +): + """ + How the affine is computed (to the understanding acquired so far): + + 0) resolution, orientation and translation are provided in separate arrays, we combine them together in a + standard 4x4 matrix. + + 1) We invert the resulting matrix - according to conventions ParaVision (scanner to image frame) + and DICOM/Nifti (image to scanner frame). + + 2) impose the signs of the first two columns (pivots) to be negative, and the third to be be positive. + - according to the fact that the provided transformation is DICOM-like (LPS) instead of NIFTI like (RAS) + (Left/Right, Anterior/Posterior, Inferior/Superior). + + -------- optional changes ---------- + + 3) frame_body_as_frame_head: Switching the last 2 columns of the rotational part, no matter the value of + VisuCorePosition - According to the fact we are dealing with quadrupeds and not with humans, + we need to switch the Anterior-Posterior with the Inferior-Superior direction. + Set frame_body_as_frame_head=True to set the biped orientation. + + 4) consider_subject_position: This can be 'head_prone' or 'head_supine'. + Reason why sometimes this must be considered for a correct + orientation and must be considered dis-jointly with frame_body_as_frame_head, is that this parameter is sometimes + tuned to voluntarily switch from radiological to neurological coordinate systems. + If the subject is Prone and the technician wants to have the coordinates in neurological he/she can consciously + set the variable vc_subject_position to 'Head_Supine', even if the subject is not supine. + + 5) keep_same_det: Finally, for safety, we can impose the same determinant as the input matrix. + + (If there is any b-vectors list, this is modified accordingly). + + :param vc_orientation: visu core orientation parameter. + :param vc_position: visu core position parameter. - corresponds to the translational part of the matrix. + :param vc_subject_position: 'Head_Prone' or 'Head_Supine'. If head supine and if consider_subject_position is True + it invert the direction of the axis anterior-posterior. - do not confuse subject_position with positon (read this + last as 'translation'). + :param resolution: resolution of the image, output of compute_resolution_from_visu_pars in the same module. + :param frame_body_as_frame_head: [False] to parametrise the difference between monkeys [True] and rats [False]. + :param keep_same_det: in case you want the determinant to be the same as the input one. Consider it in particular + if frame_body_as_frame_head is set to False, and according to the choice of consider_subject_position. + :param consider_subject_position: [False] The reason why sometimes this must be considered for a correct + orientation and sometimes must not, is that this parameter is tuned to voluntarily switch from radiological + to neurological coordinate systems. If the subject is Prone and the technician wants to have the coordinates + in neurological he/she can consciously set the variable vc_subject_position to 'Head_Supine'. + :return: final affine (qform) transformation according to the nifti convention + + NOTE: we are assuming that the angles parametrisation is the same for the input and the output. + We hope this is the case as we do not have any mean to confirm that. The fslreorient2std from FSL + should be applied afterwards to all the images (after DWI analysis if any). + """ + + sanity_check_visu_core_subject_position(vc_subject_position) + vc_orientation = filter_orientation(vc_orientation) + + # 0) integrate resolution with the orientation and add the translation in the projective coordinates: + + result = np.eye(4, dtype=np.float32) + result[0:3, 0:3] = vc_orientation + result[0:3, 3] = vc_position + + # 1) Invert the orientation matrix, according to nifti convention and Bruker manual. + # Round the decimals to avoid precision problems. Check if determinant makes sense. + result = np.round(np.linalg.inv(result), decimals=4) + result_det = np.linalg.det(result) + if result_det == 0: + raise IOError("Orientation determinant is 0. Cannot grasp this dataset.") + + # 2-3) impose pivot first column negative, second column negative, third column positive + result_orientation = result[:3, :3] + + result_orientation = result_orientation.dot( + np.array([[1, 0, 0], [0, 0, 1], [0, 1, 0]]) + ) + if frame_body_as_frame_head: # from SAR to ASL + result_orientation = result_orientation.dot( + np.array([[0, -1, 0], [1, 0, 0], [0, 0, 1]]) + ) + + if pivot(result_orientation[:, 0]) > 0: + result_orientation[:, 0] = -1 * result_orientation[:, 0] + if pivot(result_orientation[:, 1]) > 0: + result_orientation[:, 1] = -1 * result_orientation[:, 1] + if pivot(result_orientation[:, 2]) < 0: + result_orientation[:, 2] = -1 * result_orientation[:, 2] + + result_orientation = result_orientation.dot(np.diag(resolution)) + + result[:3, :3] = result_orientation + + # 4) - optional + if consider_subject_position: + if vc_subject_position == "Head_Prone": + result[1, :] = -1 * result[1, :] + # 5) - optional + if keep_same_det: + if (np.linalg.det(result) < 0 < result_det) or ( + np.linalg.det(result) > 0 > result_det + ): + result[0, :3] = -1 * result[0, :3] + + return result + + +# --- b-vectors utils --- + + +def obtain_b_vectors_orient_matrix( + vc_orientation, + vc_subject_position, + frame_body_as_frame_head=False, + keep_same_det=True, + consider_subject_position=False, +): + + """ + See _utils.compute_affine_from_visu_pars help for the same input parameters. + :param vc_orientation: VisuCoreOrientation parameter file + :param vc_subject_position: VisuCoreSubjectPosition parameter file + :param frame_body_as_frame_head: + :param keep_same_det: + :param consider_subject_position: + :return: + """ + resolution = np.array([1, 1, 1]) + translation = np.array([0, 0, 0]) + + aff = compute_affine_from_visu_pars( + vc_orientation, + translation, + vc_subject_position, + resolution, + frame_body_as_frame_head=frame_body_as_frame_head, + keep_same_det=keep_same_det, + consider_subject_position=consider_subject_position, + ) + + return np.copy(aff[:3, :3]) + + +def normalise_b_vect(b_vect, remove_nan=True): + """ + Normalisation of the b_vector matrix (dim : num b-vectors x 3) + :param b_vect: the b_vector matrix (dim : num b-vectors x 3) + :param remove_nan: remove nan if appears in the b-vector matrix, applying np.nan_to_num. + :return: normalised b-vectors. + """ + + b_vect_normalised = np.zeros_like(b_vect) + norms = np.linalg.norm(b_vect, axis=1) + + for r in range(b_vect.shape[0]): + if norms[r] < 10e-5: + b_vect_normalised[r, :] = np.nan + else: + b_vect_normalised[r, :] = (1 / float(norms[r])) * b_vect[r, :] + + if remove_nan: + b_vect_normalised = np.nan_to_num(b_vect_normalised) + + return b_vect_normalised + + +def apply_reorientation_to_b_vects(reorientation_matrix, row_b_vectors_in_rows): + """ + :param reorientation_matrix: a 3x3 matrix representing a reorientation in the 3D space: + Typically with det = 1 or -1. + a b c + d e f + g h i + + :param row_b_vectors_in_rows: + A nx3 matrix where n row-major b-vectors (v1, v2, v3, v4, ...) are aligned in rows + v1_1 v1_2 v1_3 + v2_1 v2_2 v2_3 + v3_1 v3_2 v3_3 + v4_1 v4_2 v4_3 + ... + + :return: + An nx3 matrix where each row is the corresponding b-vector multiplied by the same matrix reorientation_matrix: + a.v1_1 + b.v1_2 + c.v1_3 + d.v1_1 + e.v1_2 + f.v1_3 + g.v1_1 + h.v1_2 + i.v1_3 + a.v2_1 + b.v2_2 + c.v2_3 + d.v2_1 + e.v2_2 + f.v2_3 + g.v2_1 + h.v2_2 + i.v2_3 + a.v3_1 + b.v3_2 + c.v3_3 + d.v3_1 + e.v3_2 + f.v3_3 + g.v3_1 + h.v3_2 + i.v3_3 + a.v4_1 + b.v4_2 + c.v4_3 + d.v4_1 + e.v4_2 + f.v4_3 + g.v4_1 + h.v4_2 + i.v4_3 + ... + + """ + b_vectors_in_column_reoriented = np.einsum( + "ij, kj -> ki", reorientation_matrix, row_b_vectors_in_rows + ) + return b_vectors_in_column_reoriented + + +# -- nibabel-related utils -- + + +def set_new_data(image, new_data, new_dtype=None, remove_nan=True): + """ + From a nibabel image and a numpy array it creates a new image with + the same header of the image and the new_data as its data. + :param image: nibabel image + :param new_data: numpy array + :param new_dtype: + :param remove_nan: + :return: nibabel image + """ + if remove_nan: + new_data = np.nan_to_num(new_data) + + # if nifty1 + if image.header["sizeof_hdr"] == 348: + new_image = nib.Nifti1Image(new_data, image.affine, header=image.header) + # if nifty2 + elif image.header["sizeof_hdr"] == 540: + new_image = nib.Nifti2Image(new_data, image.affine, header=image.header) + else: + raise IOError("Input image header problem") + + # update data type: + if new_dtype is None: + new_image.set_data_dtype(new_data.dtype) + else: + new_image.set_data_dtype(new_dtype) + + return new_image + + +def path_contains_whitespace(*args): + + if re.search("\\s+", os.path.join(*args)): + return True + else: + return False diff --git a/scripts/MRI_ingest/bruker2nifti/converter.py b/scripts/MRI_ingest/bruker2nifti/converter.py new file mode 100644 index 00000000..d529ac21 --- /dev/null +++ b/scripts/MRI_ingest/bruker2nifti/converter.py @@ -0,0 +1,218 @@ +import os + +from bruker2nifti._utils import bruker_read_files +from bruker2nifti._getters import get_list_scans, get_subject_name +from bruker2nifti._cores import scan2struct, write_struct + + +class Bruker2Nifti(object): + """ + Facade to collect users preferences on the conversion and accessing the core methods for the conversion + (scan_to_struct, write_struct). + + Nomenclature: + + study: a series of acquisition related to the same subject, acquired in the same scanning session and usually + containing multiple scans. It is provided as a folder structure containing the scans produced with paravision (PV) + software. Patient/subject information are embedded in the study (opposed hierarchy as in the DICOM files). + + scan or experiment, sub-scans and sub-volumes: individual folder image acquired with various protocols. To a scan + can belong more than one processed image, or reconstruction. Each processed image can be a single volume or can + contain more than one sub-volume embedded in the same processed image. + + header: header of the nifti format. + + img_data: data of the nifti format, stored in a 2d or 3d matrix. + + struct: intermediate structure (python dictionary) proposed in this code, aimed at collecting the information from + the raw Bruker and to progressively creating the nifti images. + """ + + def __init__(self, pfo_study_bruker_input, pfo_study_nifti_output, study_name=None): + """ + Initialise the Facade class to the converter. + :param pfo_study_bruker_input: path to folder (pfo) to the Bruker input data folder. + :param pfo_study_nifti_output: path to folder (pfo) where the converted study will be stored. + :param study_name: optional name of the study. If None, the name parsed from the Bruker study will be used. + """ + self.pfo_study_bruker_input = pfo_study_bruker_input + self.pfo_study_nifti_output = pfo_study_nifti_output + self.study_name = study_name + # converter settings for the nifti values + self.nifti_version = 1 + self.qform_code = 1 + self.sform_code = 2 + self.save_human_readable = True + self.save_b0_if_dwi = ( + True + ) # if DWI, it saves the first layer as a single nfti image. + self.correct_slope = True + self.correct_offset = True + # advanced sample positioning + self.sample_upside_down = False + self.frame_body_as_frame_head = False + # chose to convert extra files: + self.get_acqp = False + self.get_method = False + self.get_reco = False + # advanced selections: + self.scans_list = ( + None + ) # you can select a subset of scans in the study to be converted. + self.list_new_name_each_scan = ( + None + ) # you can select specific names for the subset self.scans_list. + self.verbose = 1 + # automatic filling of advanced selections class attributes + self.explore_study() + + def explore_study(self): + """ + Automatic filling of the advanced selections class attributes. + It also checks if the given attributes are meaningful. + :return: + """ + + if not os.path.isdir(self.pfo_study_bruker_input): + raise IOError("Input folder does not exist.") + if not os.path.isdir(self.pfo_study_nifti_output): + raise IOError("Output folder does not exist.") + if self.scans_list is None: + self.scans_list = get_list_scans( + self.pfo_study_bruker_input, print_structure=False + ) + assert isinstance(self.scans_list, list) + msg = ( + "No scans found, are you sure the input folder contains a Bruker study?" + ) + if not len(self.scans_list) > 0: + raise IOError(msg) + if self.study_name is None or self.study_name is "": + _study_name = get_subject_name(self.pfo_study_bruker_input).replace( + " ", "_" + ) + self.study_name = "".join(e for e in _study_name if e.isalnum()) + if self.list_new_name_each_scan is None: + list_new_name_each_scan = [ + self.study_name + "_" + ls for ls in self.scans_list + ] + self.list_new_name_each_scan = list_new_name_each_scan + assert isinstance(self.list_new_name_each_scan, list) + # if self.list_new_nifti_file_names is None: + # self.list_new_nifti_file_names = self.list_new_name_each_scan + else: + if not len(self.scans_list) == len(self.list_new_name_each_scan): + msg = ( + "list_name_each_scan {0} does not have the same amount of scans in the " + "study: {1}".format(self.list_new_name_each_scan, self.scans_list) + ) + raise IOError(msg) + + def show_study_structure(self): + """ + Print to console the structure of the selected study. + :return: [None] only print to console information. + """ + if not os.path.isdir(self.pfo_study_bruker_input): + raise IOError("Input folder does not exist.") + + print("Study folder structure: ") + scans_list = get_list_scans(self.pfo_study_bruker_input) + print("\n") + print("List of scans: {}".format(scans_list)) + pfi_first_scan = os.path.join(self.pfo_study_bruker_input, scans_list[0]) + acqp = bruker_read_files("acqp", pfi_first_scan) + print("Version: {}".format(acqp["ACQ_sw_version"][0])) + + def convert_scan( + self, + pfo_input_scan, + pfo_output_converted, + nifti_file_name=None, + create_output_folder_if_not_exists=True, + ): + """ + :param pfo_input_scan: path to folder (pfo) containing a scan from Bruker, see documentation for the difference + between Bruker 'scan' and Bruker 'study'. + :param pfo_output_converted: path to the folder where the converted scan will be stored. + :param create_output_folder_if_not_exists: [True] if the output folder does not exist will be created. + :param nifti_file_name: [None] filename of the nifti image that will be saved into the pfo_output folder. + If None, the filename will be obtained from the parameter file of the study. + :return: [None] save the data parsed from the raw Bruker scan into a folder, including the nifti image. + """ + + if not os.path.isdir(pfo_input_scan): + raise IOError("Input folder does not exist.") + + if create_output_folder_if_not_exists: + os.makedirs(pfo_output_converted) + + struct_scan = scan2struct( + pfo_input_scan, + correct_slope=self.correct_slope, + correct_offset=self.correct_offset, + sample_upside_down=self.sample_upside_down, + nifti_version=self.nifti_version, + qform_code=self.qform_code, + sform_code=self.sform_code, + get_acqp=self.get_acqp, + get_method=self.get_method, + get_reco=self.get_reco, + frame_body_as_frame_head=self.frame_body_as_frame_head, + ) + + if struct_scan is not None: + write_struct( + struct_scan, + pfo_output_converted, + fin_scan=nifti_file_name, + save_human_readable=self.save_human_readable, + save_b0_if_dwi=self.save_b0_if_dwi, + verbose=self.verbose, + ) + + def convert(self): + """ + To call the converter, once all the settings of the converter are selected and modified by the user. + :return: Convert the Bruker study, whose path is stored in the class variable self.pfo_study_bruker_input + in the specified folder stored in self.pfo_study_nifti_output, and according to the other class attributes. + + Example: + + >> bru = Bruker2Nifti('/path/to/my/study', '/path/output', study_name='study1') + + >> bru.show_study_structure + + >> bru.verbose = 2 + >> bru.correct_slope = True + >> bru.get_acqp = False + >> bru.get_method = True # I want to see the method parameter file converted as well. + >> bru.get_reco = False + + >> # Convert the study: + >> bru.convert() + + """ + pfo_nifti_study = os.path.join(self.pfo_study_nifti_output, self.study_name) + os.makedirs(pfo_nifti_study) + + print("\nStudy conversion \n{}\nstarted:\n".format(self.pfo_study_bruker_input)) + + for bruker_scan_name, scan_name in zip( + self.scans_list, self.list_new_name_each_scan + ): + pfo_scan_bruker = os.path.join( + self.pfo_study_bruker_input, bruker_scan_name + ) + pfo_scan_nifti = os.path.join(pfo_nifti_study, scan_name) + + print("\nConverting experiment {}:\n".format(bruker_scan_name)) + + self.convert_scan( + pfo_scan_bruker, + pfo_scan_nifti, + create_output_folder_if_not_exists=True, + nifti_file_name=scan_name, + ) + + print("\nStudy converted and saved in \n{}".format(self.pfo_study_nifti_output)) diff --git a/scripts/MRI_ingest/ingest_MRI.ipynb b/scripts/MRI_ingest/ingest_MRI.ipynb new file mode 100644 index 00000000..2de5ff80 --- /dev/null +++ b/scripts/MRI_ingest/ingest_MRI.ipynb @@ -0,0 +1,91 @@ +{ + "cells": [ + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "# use bruker_struct object to parse out some fields\n", + "\n", + "class MRIScan(AindModel):\n", + "\n", + " scan_type: ScanType : # scan with smallest reso is 3d scan (yoni)\n", + " primary_scan: bool # How do i determine this?\n", + " scan_sequence_type: MriScanSequence # acqp: ##$ACQ_method=( 20 ) \n", + " axes: List[Axis] ##$VisuCoreOrientation=( 1, 9 ) 1 0 0 0 0 -1 0 1 0, in LPS maybe, could probably be determined from b2nifti ()\n", + " voxel_sizes: Scale3dTransform = Field(\n", + " ..., title=\"Voxel sizes\", description=\"Size of voxels in order as specified in axes\"\n", + " ) # nothing referencing voxels, maybe needs explanation\n", + " processing_steps: Optional[\n", + " List[\n", + " EnumSubset[\n", + " ProcessName.FIDUCIAL_SEGMENTATION,\n", + " ProcessName.REGISTRATION_TO_TEMPLATE,\n", + " ProcessName.SKULL_STRIPPING,\n", + " ]\n", + " ]\n", + " ]\n", + " echo_time: Decimal = Field(..., title=\"Echo time (ms)\") # ##$ACQ_echo_time=( 1 )\n", + " effective_echo_time: Decimal = Field(..., title=\"Effective echo time (ms)\") # Is this inter_echo_time? ##$PVM_EchoTime1=10.6666666666667\n", + "##$PVM_EchoTime2=10.6666666666667\n", + " echo_time_unit: TimeUnit = Field(TimeUnit.MS, title=\"Echo time unit\")\n", + " repetition_time: Decimal = Field(..., title=\"Repetition time (ms)\") ##$ACQ_repetition_time=( 1 )\n", + " repetition_time_unit: TimeUnit = Field(TimeUnit.MS, title=\"Repetition time unit\")\n", + " additional_scan_parameters: Dict[str, Any] = Field(..., title=\"Parameters\")\n", + " notes: Optional[str] = Field(None, title=\"Notes\")" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "class MriSession(AindCoreModel):\n", + " \"\"\"Description of an MRI scan\"\"\"\n", + "\n", + " schema_version: str = Field(\"0.1.10\", description=\"schema version\", title=\"Version\", const=True)\n", + " subject_id: str = Field(\n", + " ...,\n", + " description=\"Unique identifier for the subject. If this is not a Allen LAS ID, indicate this in the Notes.\",\n", + " title=\"Subject ID\",\n", + " ) ##$SUBJECT_study_name=( 64 ) <684810_2023_07_21>\n", + " session_start_time: datetime = Field(..., title=\"Session start time\")\n", + " session_end_time: Optional[datetime] = Field(None, title=\"Session end time\")\n", + " experimenter_full_name: List[str] = Field(\n", + " ...,\n", + " description=\"First and last name of the experimenter(s).\",\n", + " title=\"Experimenter(s) full name\",\n", + " )\n", + " protocol_id: str = Field(..., title=\"Protocol ID\", description=\"DOI for protocols.io\")\n", + " iacuc_protocol: Optional[str] = Field(None, title=\"IACUC protocol\")\n", + " animal_weight_prior: Optional[Decimal] = Field(\n", + " None,\n", + " title=\"Animal weight (g)\",\n", + " description=\"Animal weight before procedure\",\n", + " units=\"g\",\n", + " )\n", + " animal_weight_post: Optional[Decimal] = Field(\n", + " None,\n", + " title=\"Animal weight (g)\",\n", + " description=\"Animal weight after procedure\",\n", + " units=\"g\",\n", + " )\n", + " weight_unit: MassUnit = Field(MassUnit.G, title=\"Weight unit\")\n", + " anaesthesia: Optional[Anaesthetic] = Field(None, title=\"Anaesthesia\")\n", + " mri_scanner: Scanner = Field(..., title=\"MRI scanner\")\n", + " scans: List[MRIScan] = Field(..., title=\"MRI scans\")\n", + " notes: Optional[str] = Field(None, title=\"Notes\")\n" + ] + } + ], + "metadata": { + "language_info": { + "name": "python" + }, + "orig_nbformat": 4 + }, + "nbformat": 4, + "nbformat_minor": 2 +} diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb new file mode 100644 index 00000000..86333687 --- /dev/null +++ b/scripts/MRI_ingest/scratch.ipynb @@ -0,0 +1,111 @@ +{ + "cells": [ + { + "cell_type": "code", + "execution_count": 6, + "metadata": {}, + "outputs": [], + "source": [ + "from bruker2nifti._metadata import BrukerMetadata\n", + "from pathlib import Path" + ] + }, + { + "cell_type": "code", + "execution_count": 15, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "['1', '2', '3', '4', '5', '6', '7']\n", + "['1']\n", + "{'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([400., 164., 130.]), 'RECO_ft_size': array([400., 166., 130.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([200., 140., 130.]), 'RECO_offset': array([[100.],\n", + " [ 13.],\n", + " [ 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC NO_BC', 'RECO_bc_start': array([300., 123., 98.]), 'RECO_bc_len': array([100., 41., 32.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0., 0.]), 'RECO_qopts': 'CONJ_AND_QNEG NO_QOPTS NO_QOPTS', 'RECO_wdw_mode': 'NO_WDW NO_WDW NO_WDW', 'RECO_lb': array([-0.5, -0.5, -0.5]), 'RECO_sw': array([2.e+05, 1.e+00, 1.e+00]), 'RECO_gb': array([0.5, 0.5, 0.5]), 'RECO_sbs': array([1., 1., 1.]), 'RECO_tm1': array([0.25, 0.25, 0.25]), 'RECO_tm2': array([0.75, 0.75, 0.75]), 'RECO_ft_mode': 'COMPLEX_FT COMPLEX_FT COMPLEX_FT', 'RECO_pc_mode': 'NO_PC NO_PC NO_PC', 'RECO_pc_lin': ['(0, 0)', '(0, 0)', '(0, 0)'], 'RECO_rotate': array([[0. ],\n", + " [0.44578313],\n", + " [0.45384615]]), 'RECO_ppc_mode': 'NO_PPC', 'RECO_ref_image': 0.0, 'RECO_nr_supports': 0.4, 'RECO_sig_threshold': 0.15, 'RECO_ppc_degree': 1.0, 'RECO_ppc_coeffs': array([[[0., 0.],\n", + " [0., 0.],\n", + " [0., 0.]]]), 'RECO_dc_elim': 'No', 'RECO_transposition': 1.0, 'RECO_image_type': 'MAGNITUDE_IMAGE', 'RECO_image_threshold': 0.15, 'RECO_ir_scale': 10.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'RECO_map_percentile': array([ 1. , 99.999]), 'RECO_map_error': 0.00025, 'RECO_globex': 0.0, 'RECO_minima': 49.0, 'RECO_maxima': 32766.0, 'RECO_map_min': -13236953.9213779, 'RECO_map_max': 13236953.9213779, 'RECO_map_offset': 0.0, 'RECO_map_slope': 0.0024754183832556, 'RECO_byte_order': 'littleEndian', 'RECO_time': '11:27:33 21 Jul 2023', 'RECO_abs_time': 1689964053.0, 'RECO_base_image_uid': '2.16.756.5.5.100.380435303.14105.1689969391.16', 'GS_reco_display': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'END': ''}, 'visu_pars': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'VisuVersion': 1.0, 'VisuUid': '2.16.756.5.5.100.380435303.14105.1689969391.16', 'VisuCreator': 'ParaVision', 'VisuCreatorVersion': '5.1', 'VisuCreationDate': '11:27:33 21 Jul 2023', 'VisuCoreFrameCount': 1.0, 'VisuCoreDim': 3.0, 'VisuCoreSize': array([140., 200., 130.]), 'VisuCoreDimDesc': 'spatial spatial spatial', 'VisuCoreExtent': array([14., 20., 13.]), 'VisuCoreFrameThickness': 13.0, 'VisuCoreUnits': ['mm', 'mm', 'mm'], 'VisuCoreOrientation': array([[ 1., 0., 0., 0., 0., -1., 0., 1., 0.]]), 'VisuCorePosition': array([[-6.1, -7. , 7.9]]), 'VisuCoreDataMin': 49.0, 'VisuCoreDataMax': 32766.0, 'VisuCoreDataOffs': 0.0, 'VisuCoreDataSlope': 403.972115083361, 'VisuCoreFrameType': 'MAGNITUDE_IMAGE', 'VisuCoreWordType': '_16BIT_SGN_INT', 'VisuCoreByteOrder': 'littleEndian', 'VisuCoreDiskSliceOrder': 'disk_reverse_slice_order', 'VisuSubjectName': 'DL_AI2', 'VisuSubjectId': 'DL_AI2', 'VisuSubjectBirthDate': '', 'VisuSubjectSex': 'FEMALE', 'VisuSubjectComment': 'DL_AI2', 'VisuStudyUid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'VisuStudyDate': '11:51:04 21 Jul 2023', 'VisuStudyId': '684811_2023_07_21', 'VisuStudyNumber': 2.0, 'VisuSubjectWeight': 5.0, 'VisuStudyReferringPhysician': '', 'VisuStudyDescription': '684811_2023_07_21', 'VisuSeriesNumber': 458753.0, 'VisuSubjectPosition': 'Head_Supine', 'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuAcqSoftwareVersion': '5.1', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:27:33 21 Jul 2023', 'VisuAcqEchoTrainLength': 4.0, 'VisuAcqSequenceName': '(RARE (pvm))', 'VisuAcqNumberOfAverages': 2.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 500.0, 'VisuAcqPhaseEncSteps': 164.0, 'VisuAcqPixelBandwidth': 500.0, 'VisuAcqFlipAngle': 180.0, 'VisuAcqSize': array([164., 400., 130.]), 'VisuAcqImageSizeAccellerated': 'Yes', 'VisuAcqImagePhaseEncDir': 'row_slice_dir', 'VisuAcqEchoTime': 10.6666666666667, 'VisuAcquisitionProtocol': '07c_RARE_8_3D_T2w_cor', 'VisuAcqScanTime': 5330000.0, 'END': ''}}\n", + "{'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'SUBJECT_version_nr': 2.0, 'SUBJECT_id': 'DL_AI2', 'SUBJECT_patient_instance_uid': '2.16.756.5.5.100.380435303.12267.1689961864.4393', 'SUBJECT_name_string': 'DL_AI2', 'SUBJECT_name': 'DL_AI2', 'SUBJECT_dbirth': '', 'SUBJECT_type': 'Human', 'SUBJECT_sex': 'female', 'SUBJECT_sex_human': 'Female', 'SUBJECT_remarks': 'DL_AI2', 'SUBJECT_study_name': '684811_2023_07_21', 'SUBJECT_study_nr': 2.0, 'SUBJECT_study_instance_uid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'SUBJECT_size': 0.001, 'SUBJECT_weight': 5.0, 'SUBJECT_purpose': '684811_2023_07_21', 'SUBJECT_pos_valid': 'Yes', 'SUBJECT_location': 'DL_AI2', 'SUBJECT_entry': 'SUBJ_ENTRY_HeadFirst', 'SUBJECT_position': 'SUBJ_POS_Supine', 'SUBJECT_date': '10:51:04 21 Jul 2023', 'SUBJECT_abs_date': 1689961864.0, 'SUBJECT_study_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'END': ''}\n", + "{'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'SUBJECT_version_nr': 2.0, 'SUBJECT_id': 'DL_AI2', 'SUBJECT_patient_instance_uid': '2.16.756.5.5.100.380435303.12267.1689961864.4393', 'SUBJECT_name_string': 'DL_AI2', 'SUBJECT_name': 'DL_AI2', 'SUBJECT_dbirth': '', 'SUBJECT_type': 'Human', 'SUBJECT_sex': 'female', 'SUBJECT_sex_human': 'Female', 'SUBJECT_remarks': 'DL_AI2', 'SUBJECT_study_name': '684811_2023_07_21', 'SUBJECT_study_nr': 2.0, 'SUBJECT_study_instance_uid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'SUBJECT_size': 0.001, 'SUBJECT_weight': 5.0, 'SUBJECT_purpose': '684811_2023_07_21', 'SUBJECT_pos_valid': 'Yes', 'SUBJECT_location': 'DL_AI2', 'SUBJECT_entry': 'SUBJ_ENTRY_HeadFirst', 'SUBJECT_position': 'SUBJ_POS_Supine', 'SUBJECT_date': '10:51:04 21 Jul 2023', 'SUBJECT_abs_date': 1689961864.0, 'SUBJECT_study_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'END': ''}\n" + ] + } + ], + "source": [ + "path = Path(\"C:\\\\Users\\\\mae.moninghoff\\\\Documents\\\\GitHub\\\\aind-data-transfer\\\\scripts\\\\MRI_ingest\\\\MRI_files\\\\RawData-2023_07_21\\\\RAW\\\\DL_AI2.kX2\")\n", + "\n", + "metadata = BrukerMetadata(path)\n", + "metadata.parse_scans()\n", + "metadata.parse_subject()\n", + "subj = metadata.read_subject()\n", + "print(metadata.list_scans())\n", + "print(metadata.list_recons(\"7\"))\n", + "recon = metadata.read_recon(\"7\", \"1\")\n", + "print(recon)\n", + "print(subj)\n", + "\n", + "#best to look at are acqp and metadata files\n", + "#reco / visupars can sometimes have useful data\n", + "\n", + "print(metadata.subject_data)" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "from bruker2nifti._utils import bruker_read_files" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "from aind_data_schema.imaging.mri_session import MRIScan\n", + "\n", + "scan = MRIScan(\n", + " scan_type=,\n", + " primary_scan=,\n", + " scan_sequence_type=,\n", + " axes=,\n", + " voxel_sizes=,\n", + " processing_steps=,\n", + " echo_time=,\n", + " effective_echo_time=,\n", + " echo_time_unit=,\n", + " repetition_time=,\n", + " repetition_time_unit=,\n", + " additional_scan_parameters=,\n", + " notes=,\n", + ")" + ] + } + ], + "metadata": { + "kernelspec": { + "display_name": "Python 3", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.11.5" + } + }, + "nbformat": 4, + "nbformat_minor": 2 +} From 4f99b8f97880e94500872d071bee3aa0053fb4f8 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Mon, 19 Feb 2024 15:04:56 -0600 Subject: [PATCH 03/43] class added --- scripts/MRI_ingest/scratch.ipynb | 1174 +++++++++++++++++++++++++++++- 1 file changed, 1153 insertions(+), 21 deletions(-) diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb index 86333687..6a836233 100644 --- a/scripts/MRI_ingest/scratch.ipynb +++ b/scripts/MRI_ingest/scratch.ipynb @@ -2,23 +2,1031 @@ "cells": [ { "cell_type": "code", - "execution_count": 6, + "execution_count": 2, "metadata": {}, "outputs": [], "source": [ "from bruker2nifti._metadata import BrukerMetadata\n", - "from pathlib import Path" + "from pathlib import Path\n", + "from aind_data_schema.models.coordinates import Rotation3dTransform, Scale3dTransform, Translation3dTransform\n" ] }, { "cell_type": "code", - "execution_count": 15, + "execution_count": 12, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ + "{'1': {'acqp': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'PULPROG': 'FLASH.ppg', 'GRDPROG': '', 'ACQ_experiment_mode': 'SingleExperiment', 'ACQ_user_filter': 'No', 'ACQ_DS_enabled': 'Yes', 'ACQ_switch_pll_enabled': 'No', 'ACQ_preload': 0.0, 'ACQ_dim': 2.0, 'ACQ_dim_desc': 'Spatial Spatial', 'ACQ_size': array([256., 128.]), 'ACQ_ns_list_size': 1.0, 'ACQ_ns': 1.0, 'ACQ_phase_factor': 1.0, 'ACQ_scan_size': 'One_scan', 'NI': 3.0, 'NA': 1.0, 'NAE': 1.0, 'NR': 1.0, 'DS': 10.0, 'D': array([2.09388616e-02, 0.00000000e+00, 1.00000000e-05, 1.50000000e-04,\n", + " 1.00000000e-04, 0.00000000e+00, 1.85000000e-03, 0.00000000e+00,\n", + " 1.00000000e-05, 0.00000000e+00, 9.00000000e-04, 9.00000000e-04,\n", + " 2.50000000e-04, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 1.00000000e-05, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00]), 'P': array([1000., 5., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0.]), 'PL': array([ 0., 120., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'TPQQ': ['(, 17.4418065501076, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)'], 'DPQQ': ['(<>, 50, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(, 17.4940279796479, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)'], 'SW_h': 100000.0, 'SW': 166.809369234271, 'FW': 0.0, 'RG': 101.0, 'AQ_mod': 'qdig', 'DR': 20.0, 'PAPS': 'QP', 'PH_ref': 0.0, 'ACQ_BF_enable': 'Yes', 'BF1': 599.486710243222, 'SFO1': 599.486710243222, 'O1': 0.0, 'ACQ_O1_list_size': 3.0, 'ACQ_O1_list': array([0., 0., 0.]), 'ACQ_O1B_list_size': 3.0, 'ACQ_O1B_list': array([0., 0., 0.]), 'BF2': 599.6429484, 'SFO2': 599.6429484, 'O2': 0.0, 'ACQ_O2_list_size': 1.0, 'ACQ_O2_list': 0.0, 'BF3': 599.6429484, 'SFO3': 599.6429484, 'O3': 0.0, 'ACQ_O3_list_size': 1.0, 'ACQ_O3_list': 0.0, 'BF4': 599.6429484, 'SFO4': 599.6429484, 'O4': 0.0, 'BF5': 599.6429484, 'SFO5': 599.6429484, 'O5': 0.0, 'BF6': 599.6429484, 'SFO6': 599.6429484, 'O6': 0.0, 'BF7': 599.6429484, 'SFO7': 599.6429484, 'O7': 0.0, 'BF8': 599.6429484, 'SFO8': 599.6429484, 'O8': 0.0, 'NUC1': '1H', 'NUC2': 'off', 'NUC3': 'off', 'NUC4': 'off', 'NUC5': 'off', 'NUC6': 'off', 'NUC7': 'off', 'NUC8': 'off', 'NUCLEUS': '1H', 'ACQ_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'ACQ_coils': ['(, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<31P generic>, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)'], 'ACQ_coil_elements': ['(0, 3, -1, 1, 0, 0, 0, 0, 0, 0, <1H>, 0, noPin, preamp_probe, 0, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)', '(1, 3, -1, 1, 0, 0, 0, 0, 0, 0, <31P >, 0, noPin, preamp_probe, 3, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)'], 'ACQ_operation_mode': '[1H] TX/RX Volume', 'ACQ_Routing': 'RouteDefinedByCoil', 'L': array([ 0., 128., 1., 0., 0., 0., 0., 0., 0., 0., 1.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'ACQ_vd_list_size': 1.0, 'ACQ_vd_list': 1e-06, 'ACQ_vp_list_size': 1.0, 'ACQ_vp_list': 1e-06, 'ACQ_status': 'S040', 'ACQ_Routing_base': '1H', 'ACQ_protocol_location': 'DL_AI2', 'ACQ_protocol_name': '(00_A_TRIPILOT_GE_bas (FOV 3cm))', 'ACQ_scan_name': '(00_A_TRIPILOT_GE_bas (FOV 3cm))', 'ACQ_method': 'FLASH', 'ACQ_completed': 'Yes', 'ACQ_pipe_status': 'Wrapup', 'ACQ_scans_completed': 0.0, 'ACQ_nr_completed': 1.0, 'ACQ_total_completed': 384.0, 'ACQ_word_size': '_32_BIT', 'NECHOES': 1.0, 'ACQ_n_echo_images': 1.0, 'ACQ_n_movie_frames': 1.0, 'ACQ_echo_descr': '', 'ACQ_movie_descr': '', 'ACQ_fov': array([3., 3.]), 'ACQ_read_ext': 1.0, 'ACQ_slice_angle': array([0., 0., 0.]), 'ACQ_slice_orient': 'Arbitrary_Oblique', 'ACQ_patient_pos': 'Head_Supine', 'ACQ_read_offset': array([0., 0., 0.]), 'ACQ_phase1_offset': array([0., 0., 0.]), 'ACQ_phase2_offset': array([0., 0., 0.]), 'ACQ_slice_sepn': array([5., 2., 2.]), 'ACQ_slice_sepn_mode': 'Packages', 'ACQ_slice_thick': 2.0, 'ACQ_slice_offset': array([0., 0., 0.]), 'ACQ_obj_order': array([0., 2., 1.]), 'ACQ_flip_angle': 30.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 3.42, 'ACQ_inter_echo_time': 3.42, 'ACQ_recov_time': 99.0, 'ACQ_repetition_time': 100.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:07:59 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689962879.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 36.003173828125, 'FRQLO3': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([17.44180655, 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 50. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 17.49402798, 30. , 30. , 30. ,\n", + " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': '', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_medium', 'DECIM': 200.0, 'DSPFVS': 23.0, 'ACQ_scan_shift': -72.0, 'DEOSC': 2430.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 10.0, 'ACQ_trim': array([[ 4.24130846, 4.24130846, 4.24130846],\n", + " [-2.70972485, -2.70972485, -2.70972485],\n", + " [-4.01440718, -4.01440718, -4.01440718],\n", + " [ 3.72350811, 3.72350811, 3.72350811],\n", + " [-0. , -0. , -0. ],\n", + " [ 5.23618328, 5.23618328, 5.23618328],\n", + " [20. , 20. , 20. ],\n", + " [-3.72350811, -3.72350811, -3.72350811],\n", + " [ 0. , 0. , 0. ],\n", + " [20. , 20. , 20. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[ 1., -0., -0.],\n", + " [ 0., 1., 0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[ 0., 0., 1.],\n", + " [ 1., 0., 0.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 0., 0., 1.],\n", + " [ 0., 1., 0.],\n", + " [ 1., 0., 0.]]]), 'NSLICES': 3.0, 'ACQ_rare_factor': 1.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1.]), 'ACQ_spatial_size_1': 128.0, 'ACQ_spatial_phase_1': array([-1. , -0.984375, -0.96875 , -0.953125, -0.9375 , -0.921875,\n", + " -0.90625 , -0.890625, -0.875 , -0.859375, -0.84375 , -0.828125,\n", + " -0.8125 , -0.796875, -0.78125 , -0.765625, -0.75 , -0.734375,\n", + " -0.71875 , -0.703125, -0.6875 , -0.671875, -0.65625 , -0.640625,\n", + " -0.625 , -0.609375, -0.59375 , -0.578125, -0.5625 , -0.546875,\n", + " -0.53125 , -0.515625, -0.5 , -0.484375, -0.46875 , -0.453125,\n", + " -0.4375 , -0.421875, -0.40625 , -0.390625, -0.375 , -0.359375,\n", + " -0.34375 , -0.328125, -0.3125 , -0.296875, -0.28125 , -0.265625,\n", + " -0.25 , -0.234375, -0.21875 , -0.203125, -0.1875 , -0.171875,\n", + " -0.15625 , -0.140625, -0.125 , -0.109375, -0.09375 , -0.078125,\n", + " -0.0625 , -0.046875, -0.03125 , -0.015625, 0. , 0.015625,\n", + " 0.03125 , 0.046875, 0.0625 , 0.078125, 0.09375 , 0.109375,\n", + " 0.125 , 0.140625, 0.15625 , 0.171875, 0.1875 , 0.203125,\n", + " 0.21875 , 0.234375, 0.25 , 0.265625, 0.28125 , 0.296875,\n", + " 0.3125 , 0.328125, 0.34375 , 0.359375, 0.375 , 0.390625,\n", + " 0.40625 , 0.421875, 0.4375 , 0.453125, 0.46875 , 0.484375,\n", + " 0.5 , 0.515625, 0.53125 , 0.546875, 0.5625 , 0.578125,\n", + " 0.59375 , 0.609375, 0.625 , 0.640625, 0.65625 , 0.671875,\n", + " 0.6875 , 0.703125, 0.71875 , 0.734375, 0.75 , 0.765625,\n", + " 0.78125 , 0.796875, 0.8125 , 0.828125, 0.84375 , 0.859375,\n", + " 0.875 , 0.890625, 0.90625 , 0.921875, 0.9375 , 0.953125,\n", + " 0.96875 , 0.984375]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'FLASH', 'EchoTime': 3.42, 'RepetitionTime': 100.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'ScanTimeStr': '0h0m12s800ms', 'ExcPulseAngle': 30.0, 'DeriveGains': 'Yes', 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 30 17.4418065501076 100 0 100 LIB_EXCITATION', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncMatrix': array([128., 128.]), 'EncSteps1': array([-64., -63., -62., -61., -60., -59., -58., -57., -56., -55., -54.,\n", + " -53., -52., -51., -50., -49., -48., -47., -46., -45., -44., -43.,\n", + " -42., -41., -40., -39., -38., -37., -36., -35., -34., -33., -32.,\n", + " -31., -30., -29., -28., -27., -26., -25., -24., -23., -22., -21.,\n", + " -20., -19., -18., -17., -16., -15., -14., -13., -12., -11., -10.,\n", + " -9., -8., -7., -6., -5., -4., -3., -2., -1., 0., 1.,\n", + " 2., 3., 4., 5., 6., 7., 8., 9., 10., 11., 12.,\n", + " 13., 14., 15., 16., 17., 18., 19., 20., 21., 22., 23.,\n", + " 24., 25., 26., 27., 28., 29., 30., 31., 32., 33., 34.,\n", + " 35., 36., 37., 38., 39., 40., 41., 42., 43., 44., 45.,\n", + " 46., 47., 48., 49., 50., 51., 52., 53., 54., 55., 56.,\n", + " 57., 58., 59., 60., 61., 62., 63.]), 'EncCentralStep1': 1.0, 'EncTotalAccel': 1.0, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'EchoPosition': 50.0, 'EchoTimeMode': 'Long_TE', 'ReadDephaseTime': 1.0, 'ExSliceRephaseTime': 1.0, 'ReadSpoilerDuration': 1.15, 'ReadSpoilerStrength': 20.0, 'SliceSpoilerDuration': 2.0, 'SliceSpoilerStrength': 20.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Medium', 'DigRes': 20.0, 'DigDw': 0.01, 'DigSw': 100000.0, 'DigNp': 128.0, 'DigShift': 36.0, 'DigGroupDel': 0.36, 'DigDur': 1.28, 'DigEndDelMin': 0.05, 'DigEndDelOpt': 0.0824032403240322, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '2D', 'Isotropic': 'Isotropic_Fov', 'Fov': array([30., 30.]), 'FovCm': array([3., 3.]), 'SpatResol': array([0.234375, 0.234375]), 'Matrix': array([128., 128.]), 'MinMatrix': array([32., 32.]), 'MaxMatrix': array([2048., 2048.]), 'AntiAlias': array([1., 1.]), 'MaxAntiAlias': array([2., 8.]), 'SliceThick': 2.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': array([0., 2., 1.]), 'NSPacks': 3.0, 'SPackArrNSlices': array([1., 1., 1.]), 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'axial sagittal coronal', 'SPackArrReadOrient': 'L_R H_F H_F', 'SPackArrReadOffset': array([0., 0., 0.]), 'SPackArrPhase1Offset': array([0., 0., 0.]), 'SPackArrPhase2Offset': array([0., 0., 0.]), 'SPackArrSliceOffset': array([0., 0., 0.]), 'SPackArrSliceGapMode': 'non_contiguous non_contiguous non_contiguous', 'SPackArrSliceGap': array([3., 0., 0.]), 'SPackArrSliceDistance': array([5., 2., 2.]), 'SPackArrGradOrient': array([[[-1., 0., 0.],\n", + " [ 0., 1., 0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[ 0., 0., 1.],\n", + " [ 0., 1., 0.],\n", + " [ 1., 0., 0.]],\n", + "\n", + " [[ 0., 0., 1.],\n", + " [ 1., 0., 0.],\n", + " [ 0., 1., 0.]]]), 'NDummyScans': 10.0, 'MovieOnOff': 'Off', 'NMovieFrames': 1.0, 'TimeForMovieFrames': 100.0, 'EvolutionOnOff': 'Off', 'TriggerModule': 'Off', 'TaggingOnOff': 'Off', 'TaggingPulse': '0.2 0.001 90 30 100 0 100 LIB_EXCITATION bp.exc', 'TaggingDeriveGainMode': 'By_DeriveGains', 'TaggingMode': 'SPAMM', 'TaggingDir': 'Tagging_grid', 'TaggingDistance': 1.0, 'TaggingMinDistance': 0.001, 'TaggingThick': 0.2, 'TaggingOffset1': 0.0, 'TaggingOffset2': 0.0, 'TaggingAngle': 0.0, 'TaggingDelay': 0.01, 'TaggingModuleTime': 0.0, 'TaggingPulseNumber': 1.0, 'TaggingPulseElement': 0.04, 'TaggingGradientStrength': 5.0, 'TaggingSpoilGrad': 50.0, 'TaggingSpoilDuration': 2.0, 'TaggingGridDelay': 0.01, 'TaggingD0': 1e-06, 'TaggingD1': 1e-06, 'TaggingD2': 1e-06, 'TaggingD3': 1e-06, 'TaggingD4': 1e-06, 'TaggingD5': 1e-06, 'TaggingP0': 10.0, 'TaggingLp0': 0.0, 'TaggingGradAmp1': 0.0, 'TaggingGradAmp2': 0.0, 'TaggingGradAmp3': 0.0, 'TaggingGradAmp4': 0.0, 'TaggingSpoiler': 0.0, 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30447174135979, 2100.46711870033, 90,17.4940279796479, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.46711870033, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50447174135979, 'FatSupFL': -2099.3353022758, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.47174135979, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'Off', 'FovSatNSlices': 1.0, 'FovSatSliceOrient': 'sagittal', 'FovSatThick': 0.089290704407753, 'FovSatOffset': 0.0, 'FovSatSliceVec': array([[1., 0., 0.]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 20.0, 'FovSatModuleTime': 0.0, 'FovSatFL': 0.0, 'SatD0': 1e-06, 'SatD1': 1e-06, 'SatD2': 1e-06, 'SatP0': 10.0, 'SatLp0': 0.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 0.0, 'InFlowSatGap': 0.0, 'InFlowSatSide': 0.0, 'FlowSatPulse': '1 0.001 90 30 100 0 100 LIB_EXCITATION', 'FlowSatDeriveGainMode': 'By_DeriveGains', 'InFlowSatSpoilTime': 2.0, 'InFlowSatSpoilGrad': 20.0, 'InFlowSatModuleTime': 0.0, 'SfD0': 1e-06, 'SfD1': 1e-06, 'SfD2': 1e-06, 'SfP0': 10.0, 'SfLp0': 0.0, 'MotionSupOnOff': 'Off', 'EchoTime1': 3.42, 'NEchoImages': 1.0, 'ppgFlag1': 'Yes', 'RecoMethMode': 'Default', 'WeightingMode': 'positive_mask', 'MaskWeighting': 4.0, 'GaussBroadening': 1.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'END': ''}, 'recons': {'1': {'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([128., 128.]), 'RECO_ft_size': array([128., 128.]), 'RECO_fov': array([3., 3.]), 'RECO_size': array([128., 128.]), 'RECO_offset': array([[0., 0., 0.],\n", + " [0., 0., 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC', 'RECO_bc_start': array([96., 96.]), 'RECO_bc_len': array([32., 32.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0.]), 'RECO_qopts': 'CONJ_AND_QNEG NO_QOPTS', 'RECO_wdw_mode': 'NO_WDW NO_WDW', 'RECO_lb': array([-0.5, -0.5]), 'RECO_sw': array([1.e+05, 1.e+00]), 'RECO_gb': array([0.5, 0.5]), 'RECO_sbs': array([1., 1.]), 'RECO_tm1': array([0.25, 0.25]), 'RECO_tm2': array([0.75, 0.75]), 'RECO_ft_mode': 'COMPLEX_FFT COMPLEX_FFT', 'RECO_pc_mode': 'NO_PC NO_PC', 'RECO_pc_lin': ['(0, 0)', '(0, 0)'], 'RECO_rotate': array([[0. , 0. , 0. ],\n", + " [0.5, 0.5, 0.5]]), 'RECO_ppc_mode': 'NO_PPC', 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'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:07:59 21 Jul 2023', 'VisuAcqEchoTrainLength': 1.0, 'VisuAcqSequenceName': '(FLASH (pvm))', 'VisuAcqNumberOfAverages': 1.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 100.0, 'VisuAcqPhaseEncSteps': 128.0, 'VisuAcqPixelBandwidth': 781.25, 'VisuAcqFlipAngle': 30.0, 'VisuAcqSize': array([128., 128.]), 'VisuAcqImageSizeAccellerated': 'No', 'VisuAcqImagePhaseEncDir': 'col_dir row_dir row_dir', 'VisuAcqEchoTime': 3.42, 'VisuAcquisitionProtocol': '(00_A_TRIPILOT_GE_bas (FOV 3cm))', 'VisuAcqScanTime': 12800.0, 'END': ''}}}}, '2': {'acqp': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'PULPROG': 'RARE.ppg', 'GRDPROG': '', 'ACQ_experiment_mode': 'SingleExperiment', 'ACQ_user_filter': 'No', 'ACQ_DS_enabled': 'Yes', 'ACQ_switch_pll_enabled': 'No', 'ACQ_preload': 0.0, 'ACQ_dim': 2.0, 'ACQ_dim_desc': 'Spatial Spatial', 'ACQ_size': array([512., 128.]), 'ACQ_ns_list_size': 1.0, 'ACQ_ns': 1.0, 'ACQ_phase_factor': 8.0, 'ACQ_scan_size': 'One_scan', 'NI': 15.0, 'NA': 1.0, 'NAE': 1.0, 'NR': 1.0, 'DS': 2.0, 'D': array([7.62436874e-02, 5.45000000e-04, 5.00000000e-05, 2.50000000e-05,\n", + " 1.00000000e-04, 3.00000000e-04, 3.50000000e-04, 0.00000000e+00,\n", + " 1.00000000e-05, 1.80000000e-03, 1.00000000e-05, 5.50000000e-04,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00]), 'P': array([1000. , 633.33333333, 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ]), 'PL': array([ 0., 120., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'TPQQ': ['(, 7.89938145571436, 0)', '(, -2.08857153290193, 0)', '(< >, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(< >, 30, 0)'], 'DPQQ': ['(<>, 50, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(, 17.4951879761457, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)'], 'SW_h': 100000.0, 'SW': 166.809369234271, 'FW': 0.0, 'RG': 101.0, 'AQ_mod': 'qdig', 'DR': 20.0, 'PAPS': 'QP', 'PH_ref': 0.0, 'ACQ_BF_enable': 'Yes', 'BF1': 599.486710243222, 'SFO1': 599.486710243222, 'O1': 0.0, 'ACQ_O1_list_size': 15.0, 'ACQ_O1_list': array([-33048., -23868., -14688., -5508., 3672., 12852., 22032.,\n", + " 31212., -28458., -19278., -10098., -918., 8262., 17442.,\n", + " 26622.]), 'ACQ_O1B_list_size': 15.0, 'ACQ_O1B_list': array([-6000., -6000., -6000., -6000., -6000., -6000., -6000., -6000.,\n", + " -6000., -6000., -6000., -6000., -6000., -6000., -6000.]), 'BF2': 599.6429484, 'SFO2': 599.6429484, 'O2': 0.0, 'ACQ_O2_list_size': 1.0, 'ACQ_O2_list': 0.0, 'BF3': 599.6429484, 'SFO3': 599.6429484, 'O3': 0.0, 'ACQ_O3_list_size': 1.0, 'ACQ_O3_list': 0.0, 'BF4': 599.6429484, 'SFO4': 599.6429484, 'O4': 0.0, 'BF5': 599.6429484, 'SFO5': 599.6429484, 'O5': 0.0, 'BF6': 599.6429484, 'SFO6': 599.6429484, 'O6': 0.0, 'BF7': 599.6429484, 'SFO7': 599.6429484, 'O7': 0.0, 'BF8': 599.6429484, 'SFO8': 599.6429484, 'O8': 0.0, 'NUC1': '1H', 'NUC2': 'off', 'NUC3': 'off', 'NUC4': 'off', 'NUC5': 'off', 'NUC6': 'off', 'NUC7': 'off', 'NUC8': 'off', 'NUCLEUS': '1H', 'ACQ_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'ACQ_coils': ['(, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<31P generic>, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)'], 'ACQ_coil_elements': ['(0, 3, -1, 1, 0, 0, 0, 0, 0, 0, <1H>, 0, noPin, preamp_probe, 0, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)', '(1, 3, -1, 1, 0, 0, 0, 0, 0, 0, <31P >, 0, noPin, preamp_probe, 3, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)'], 'ACQ_operation_mode': '[1H] TX/RX Volume', 'ACQ_Routing': 'RouteDefinedByCoil', 'L': array([ 0., 16., 16., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0.]), 'ACQ_vd_list_size': 1.0, 'ACQ_vd_list': 1e-06, 'ACQ_vp_list_size': 1.0, 'ACQ_vp_list': 1e-06, 'ACQ_status': 'S040', 'ACQ_Routing_base': '1H', 'ACQ_protocol_location': 'DL_AI2', 'ACQ_protocol_name': '01a_Positioning', 'ACQ_scan_name': '01a_Positioning', 'ACQ_method': 'RARE', 'ACQ_completed': 'Yes', 'ACQ_pipe_status': 'Wrapup', 'ACQ_scans_completed': 0.0, 'ACQ_nr_completed': 1.0, 'ACQ_total_completed': 1920.0, 'ACQ_word_size': '_32_BIT', 'NECHOES': 8.0, 'ACQ_n_echo_images': 1.0, 'ACQ_n_movie_frames': 1.0, 'ACQ_echo_descr': '', 'ACQ_movie_descr': '', 'ACQ_fov': array([2.5, 2.5]), 'ACQ_read_ext': 1.0, 'ACQ_slice_angle': 0.0, 'ACQ_slice_orient': 'Arbitrary_Oblique', 'ACQ_patient_pos': 'Head_Supine', 'ACQ_read_offset': array([-1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5,\n", + " -1.5, -1.5, -1.5, -1.5]), 'ACQ_phase1_offset': array([-1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4,\n", + " -1.4, -1.4, -1.4, -1.4]), 'ACQ_phase2_offset': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'ACQ_slice_sepn': 1.0, 'ACQ_slice_sepn_mode': 'Contiguous', 'ACQ_slice_thick': 1.0, 'ACQ_slice_offset': array([-7.2, -6.2, -5.2, -4.2, -3.2, -2.2, -1.2, -0.2, 0.8, 1.8, 2.8,\n", + " 3.8, 4.8, 5.8, 6.8]), 'ACQ_obj_order': array([ 0., 2., 4., 6., 8., 10., 12., 14., 1., 3., 5., 7., 9.,\n", + " 11., 13.]), 'ACQ_flip_angle': 180.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 5.49333333333333, 'ACQ_inter_echo_time': 5.49333333333333, 'ACQ_recov_time': 1958.8, 'ACQ_repetition_time': 2000.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:09:45 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689962985.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 68.003173828125, 'FRQLO3': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([ 7.89938146, -2.08857153, 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 50. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 17.49518798, 30. , 30. , 30. ,\n", + " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': 'hermite.rfc', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_standard', 'DECIM': 200.0, 'DSPFVS': 20.0, 'ACQ_scan_shift': -136.0, 'DEOSC': 3125.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 7.21022438, 7.21022438, 7.21022438],\n", + " [ -6.10095909, -6.10095909, -6.10095909],\n", + " [ 7.21022438, 7.21022438, 7.21022438],\n", + " [ 15. , 15. , 15. ],\n", + " [ 17.44857383, 17.44857383, 17.44857383],\n", + " [ 6.28341994, 6.28341994, 6.28341994],\n", + " [ 8.93641947, 8.93641947, 8.93641947],\n", + " [-57. , -57. , -57. ],\n", + " [ -8.93641947, -8.93641947, -8.93641947],\n", + " [ 57. , 57. , 57. ],\n", + " [ 15. , 15. , 15. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]],\n", + "\n", + " [[-0., 1., 0.],\n", + " [ 1., 0., -0.],\n", + " [ 0., 0., 1.]]]), 'NSLICES': 15.0, 'ACQ_rare_factor': 8.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1.]), 'ACQ_spatial_size_1': 128.0, 'ACQ_spatial_phase_1': array([ 0. , 0.125 , 0.25 , 0.375 , 0.5 , 0.625 ,\n", + " 0.75 , 0.875 , -0.015625, -0.140625, -0.265625, -0.390625,\n", + " -0.515625, -0.640625, -0.765625, -0.890625, 0.015625, 0.140625,\n", + " 0.265625, 0.390625, 0.515625, 0.640625, 0.765625, 0.890625,\n", + " -0.03125 , -0.15625 , -0.28125 , -0.40625 , -0.53125 , -0.65625 ,\n", + " -0.78125 , -0.90625 , 0.03125 , 0.15625 , 0.28125 , 0.40625 ,\n", + " 0.53125 , 0.65625 , 0.78125 , 0.90625 , -0.046875, -0.171875,\n", + " -0.296875, -0.421875, -0.546875, -0.671875, -0.796875, -0.921875,\n", + " 0.046875, 0.171875, 0.296875, 0.421875, 0.546875, 0.671875,\n", + " 0.796875, 0.921875, -0.0625 , -0.1875 , -0.3125 , -0.4375 ,\n", + " -0.5625 , -0.6875 , -0.8125 , -0.9375 , 0.0625 , 0.1875 ,\n", + " 0.3125 , 0.4375 , 0.5625 , 0.6875 , 0.8125 , 0.9375 ,\n", + " -0.078125, -0.203125, -0.328125, -0.453125, -0.578125, -0.703125,\n", + " -0.828125, -0.953125, 0.078125, 0.203125, 0.328125, 0.453125,\n", + " 0.578125, 0.703125, 0.828125, 0.953125, -0.09375 , -0.21875 ,\n", + " -0.34375 , -0.46875 , -0.59375 , -0.71875 , -0.84375 , -0.96875 ,\n", + " 0.09375 , 0.21875 , 0.34375 , 0.46875 , 0.59375 , 0.71875 ,\n", + " 0.84375 , 0.96875 , -0.109375, -0.234375, -0.359375, -0.484375,\n", + " -0.609375, -0.734375, -0.859375, -0.984375, 0.109375, 0.234375,\n", + " 0.359375, 0.484375, 0.609375, 0.734375, 0.859375, 0.984375,\n", + " -0.125 , -0.25 , -0.375 , -0.5 , -0.625 , -0.75 ,\n", + " -0.875 , -1. ]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.49333333333333, 'EffectiveTE': 5.49333333333333, 'RareFactor': 8.0, 'RepetitionTime': 2000.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h0m32s0ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncOrder1': 'CENTRIC_ENC', 'EncMatrix': array([256., 128.]), 'EncSteps1': array([ 0., 8., 16., 24., 32., 40., 48., 56., -1., -9., -17.,\n", + " -25., -33., -41., -49., -57., 1., 9., 17., 25., 33., 41.,\n", + " 49., 57., -2., -10., -18., -26., -34., -42., -50., -58., 2.,\n", + " 10., 18., 26., 34., 42., 50., 58., -3., -11., -19., -27.,\n", + " -35., -43., -51., -59., 3., 11., 19., 27., 35., 43., 51.,\n", + " 59., -4., -12., -20., -28., -36., -44., -52., -60., 4., 12.,\n", + " 20., 28., 36., 44., 52., 60., -5., -13., -21., -29., -37.,\n", + " -45., -53., -61., 5., 13., 21., 29., 37., 45., 53., 61.,\n", + " -6., -14., -22., -30., -38., -46., -54., -62., 6., 14., 22.,\n", + " 30., 38., 46., 54., 62., -7., -15., -23., -31., -39., -47.,\n", + " -55., -63., 7., 15., 23., 31., 39., 47., 55., 63., -8.,\n", + " -16., -24., -32., -40., -48., -56., -64.]), 'EncCentralStep1': 1.0, 'EncTotalAccel': 1.0, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.55, 'MinEchoTime': 5.49333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 15.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Sharp', 'DigRes': 20.0, 'DigDw': 0.01, 'DigSw': 100000.0, 'DigNp': 256.0, 'DigShift': 68.0, 'DigGroupDel': 0.68, 'DigDur': 2.56, 'DigEndDelMin': 0.0499999999999998, 'DigEndDelOpt': 0.1588, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '2D', 'Isotropic': 'Isotropic_Fov', 'Fov': array([25., 25.]), 'FovCm': array([2.5, 2.5]), 'SpatResol': array([0.09765625, 0.1953125 ]), 'Matrix': array([256., 128.]), 'MinMatrix': array([32., 32.]), 'MaxMatrix': array([2048., 2048.]), 'AntiAlias': array([1., 1.]), 'MaxAntiAlias': array([2., 8.]), 'SliceThick': 1.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': array([ 0., 2., 4., 6., 8., 10., 12., 14., 1., 3., 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'NUCLEUS': '1H', 'ACQ_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'ACQ_coils': ['(, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<31P generic>, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)'], 'ACQ_coil_elements': ['(0, 3, -1, 1, 0, 0, 0, 0, 0, 0, <1H>, 0, noPin, preamp_probe, 0, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)', '(1, 3, -1, 1, 0, 0, 0, 0, 0, 0, <31P >, 0, noPin, preamp_probe, 3, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)'], 'ACQ_operation_mode': '[1H] TX/RX Volume', 'ACQ_Routing': 'RouteDefinedByCoil', 'L': array([ 0., 16., 16., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0.]), 'ACQ_vd_list_size': 1.0, 'ACQ_vd_list': 1e-06, 'ACQ_vp_list_size': 1.0, 'ACQ_vp_list': 1e-06, 'ACQ_status': 'S040', 'ACQ_Routing_base': '1H', 'ACQ_protocol_location': 'DL_AI2', 'ACQ_protocol_name': '01b_Positioning', 'ACQ_scan_name': '01b_Positioning', 'ACQ_method': 'RARE', 'ACQ_completed': 'Yes', 'ACQ_pipe_status': 'Wrapup', 'ACQ_scans_completed': 0.0, 'ACQ_nr_completed': 1.0, 'ACQ_total_completed': 1920.0, 'ACQ_word_size': '_32_BIT', 'NECHOES': 8.0, 'ACQ_n_echo_images': 1.0, 'ACQ_n_movie_frames': 1.0, 'ACQ_echo_descr': '', 'ACQ_movie_descr': '', 'ACQ_fov': array([2.5, 2.5]), 'ACQ_read_ext': 1.0, 'ACQ_slice_angle': 0.0, 'ACQ_slice_orient': 'Arbitrary_Oblique', 'ACQ_patient_pos': 'Head_Supine', 'ACQ_read_offset': array([-1.2, -1.2, -1.2, -1.2, -1.2, -1.2, -1.2, -1.2, -1.2, -1.2, -1.2,\n", + " -1.2, -1.2, -1.2, -1.2]), 'ACQ_phase1_offset': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'ACQ_phase2_offset': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'ACQ_slice_sepn': 1.0, 'ACQ_slice_sepn_mode': 'Contiguous', 'ACQ_slice_thick': 1.0, 'ACQ_slice_offset': array([-5.4, -4.4, -3.4, -2.4, -1.4, -0.4, 0.6, 1.6, 2.6, 3.6, 4.6,\n", + " 5.6, 6.6, 7.6, 8.6]), 'ACQ_obj_order': array([ 0., 2., 4., 6., 8., 10., 12., 14., 1., 3., 5., 7., 9.,\n", + " 11., 13.]), 'ACQ_flip_angle': 180.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 5.49333333333333, 'ACQ_inter_echo_time': 5.49333333333333, 'ACQ_recov_time': 1958.8, 'ACQ_repetition_time': 2000.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:11:59 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689963119.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 68.003173828125, 'FRQLO3': 0.0, 'DATE': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([ 7.89938146, -2.08857153, 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 50. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 7.89938146, 17.49518798, 30. , 30. , 30. ,\n", + " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': 'hermite.rfc', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_standard', 'DECIM': 200.0, 'DSPFVS': 20.0, 'ACQ_scan_shift': -136.0, 'DEOSC': 3125.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 7.21022438, 7.21022438, 7.21022438],\n", + " [ -6.10095909, -6.10095909, -6.10095909],\n", + " [ 7.21022438, 7.21022438, 7.21022438],\n", + " [ 15. , 15. , 15. ],\n", + " [ 17.44857383, 17.44857383, 17.44857383],\n", + " [ 6.28341994, 6.28341994, 6.28341994],\n", + " [ 8.93641947, 8.93641947, 8.93641947],\n", + " [-57. , -57. , -57. ],\n", + " [ -8.93641947, -8.93641947, -8.93641947],\n", + " [ 57. , 57. , 57. ],\n", + " [ 15. , 15. , 15. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]],\n", + "\n", + " [[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]]]), 'NSLICES': 15.0, 'ACQ_rare_factor': 8.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1.]), 'ACQ_spatial_size_1': 128.0, 'ACQ_spatial_phase_1': array([ 0. , 0.125 , 0.25 , 0.375 , 0.5 , 0.625 ,\n", + " 0.75 , 0.875 , -0.015625, -0.140625, -0.265625, -0.390625,\n", + " -0.515625, -0.640625, -0.765625, -0.890625, 0.015625, 0.140625,\n", + " 0.265625, 0.390625, 0.515625, 0.640625, 0.765625, 0.890625,\n", + " -0.03125 , -0.15625 , -0.28125 , -0.40625 , -0.53125 , -0.65625 ,\n", + " -0.78125 , -0.90625 , 0.03125 , 0.15625 , 0.28125 , 0.40625 ,\n", + " 0.53125 , 0.65625 , 0.78125 , 0.90625 , -0.046875, -0.171875,\n", + " -0.296875, -0.421875, -0.546875, -0.671875, -0.796875, -0.921875,\n", + " 0.046875, 0.171875, 0.296875, 0.421875, 0.546875, 0.671875,\n", + " 0.796875, 0.921875, -0.0625 , -0.1875 , -0.3125 , -0.4375 ,\n", + " -0.5625 , -0.6875 , -0.8125 , -0.9375 , 0.0625 , 0.1875 ,\n", + " 0.3125 , 0.4375 , 0.5625 , 0.6875 , 0.8125 , 0.9375 ,\n", + " -0.078125, -0.203125, -0.328125, -0.453125, -0.578125, -0.703125,\n", + " -0.828125, -0.953125, 0.078125, 0.203125, 0.328125, 0.453125,\n", + " 0.578125, 0.703125, 0.828125, 0.953125, -0.09375 , -0.21875 ,\n", + " -0.34375 , -0.46875 , -0.59375 , -0.71875 , -0.84375 , -0.96875 ,\n", + " 0.09375 , 0.21875 , 0.34375 , 0.46875 , 0.59375 , 0.71875 ,\n", + " 0.84375 , 0.96875 , -0.109375, -0.234375, -0.359375, -0.484375,\n", + " -0.609375, -0.734375, -0.859375, -0.984375, 0.109375, 0.234375,\n", + " 0.359375, 0.484375, 0.609375, 0.734375, 0.859375, 0.984375,\n", + " -0.125 , -0.25 , -0.375 , -0.5 , -0.625 , -0.75 ,\n", + " -0.875 , -1. ]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.49333333333333, 'EffectiveTE': 5.49333333333333, 'RareFactor': 8.0, 'RepetitionTime': 2000.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h0m32s0ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncOrder1': 'CENTRIC_ENC', 'EncMatrix': array([256., 128.]), 'EncSteps1': array([ 0., 8., 16., 24., 32., 40., 48., 56., -1., -9., -17.,\n", + " -25., -33., -41., -49., -57., 1., 9., 17., 25., 33., 41.,\n", + " 49., 57., -2., -10., -18., -26., -34., -42., -50., -58., 2.,\n", + " 10., 18., 26., 34., 42., 50., 58., -3., -11., -19., -27.,\n", + " -35., -43., -51., -59., 3., 11., 19., 27., 35., 43., 51.,\n", + " 59., -4., -12., -20., -28., -36., -44., -52., -60., 4., 12.,\n", + " 20., 28., 36., 44., 52., 60., -5., -13., -21., -29., -37.,\n", + " -45., -53., -61., 5., 13., 21., 29., 37., 45., 53., 61.,\n", + " -6., -14., -22., -30., -38., -46., -54., -62., 6., 14., 22.,\n", + " 30., 38., 46., 54., 62., -7., -15., -23., -31., -39., -47.,\n", + " -55., -63., 7., 15., 23., 31., 39., 47., 55., 63., -8.,\n", + " -16., -24., -32., -40., -48., -56., -64.]), 'EncCentralStep1': 1.0, 'EncTotalAccel': 1.0, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.55, 'MinEchoTime': 5.49333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 15.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Sharp', 'DigRes': 20.0, 'DigDw': 0.01, 'DigSw': 100000.0, 'DigNp': 256.0, 'DigShift': 68.0, 'DigGroupDel': 0.68, 'DigDur': 2.56, 'DigEndDelMin': 0.0499999999999998, 'DigEndDelOpt': 0.1588, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '2D', 'Isotropic': 'Isotropic_Fov', 'Fov': array([25., 25.]), 'FovCm': array([2.5, 2.5]), 'SpatResol': array([0.09765625, 0.1953125 ]), 'Matrix': array([256., 128.]), 'MinMatrix': array([32., 32.]), 'MaxMatrix': array([2048., 2048.]), 'AntiAlias': array([1., 1.]), 'MaxAntiAlias': array([2., 8.]), 'SliceThick': 1.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': array([ 0., 2., 4., 6., 8., 10., 12., 14., 1., 3., 5., 7., 9.,\n", + " 11., 13.]), 'NSPacks': 1.0, 'SPackArrNSlices': 15.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'L_R', 'SPackArrReadOffset': -1.2, 'SPackArrPhase1Offset': 0.0, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 1.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': 0.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[ 1., -0., 0.],\n", + " [-0., -0., 1.],\n", + " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([10. , 8.6, 10.4]), 'FovSatOffset': array([-10.7 , 15.678021, -18.821979]), 'FovSatSliceVec': array([[ 0., 1., -0.],\n", + " [ 1., 0., 0.],\n", + " [ 1., 0., 0.]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[ 0. , 0.00848262, -0. ],\n", + " [ 0.00986351, 0. , 0. ],\n", + " [ 0.00815636, 0. , 0. ]]), 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 20.0, 'FovSatModuleTime': 9.7, 'FovSatFL': array([-5778. , 9844.33876737, -9772.95063468]), 'SatD0': 0.00015, 'SatD1': 1e-05, 'SatD2': 0.002, 'SatP0': 1000.0, 'SatLp0': 3.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 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preamp_probe, 0, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)', '(1, 3, -1, 1, 0, 0, 0, 0, 0, 0, <31P >, 0, noPin, preamp_probe, 3, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)'], 'ACQ_operation_mode': '[1H] TX/RX Volume', 'ACQ_Routing': 'RouteDefinedByCoil', 'L': array([0., 8., 9., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'ACQ_vd_list_size': 1.0, 'ACQ_vd_list': 1e-06, 'ACQ_vp_list_size': 1.0, 'ACQ_vp_list': 1e-06, 'ACQ_status': 'S040', 'ACQ_Routing_base': '1H', 'ACQ_protocol_location': 'DL_AI2', 'ACQ_protocol_name': '07b_RARE_8_3D_T2w_cor', 'ACQ_scan_name': '07b_RARE_8_3D_T2w_cor', 'ACQ_method': 'RARE', 'ACQ_completed': 'Yes', 'ACQ_pipe_status': 'Wrapup', 'ACQ_scans_completed': 0.0, 'ACQ_nr_completed': 1.0, 'ACQ_total_completed': 900.0, 'ACQ_word_size': '_32_BIT', 'NECHOES': 4.0, 'ACQ_n_echo_images': 1.0, 'ACQ_n_movie_frames': 1.0, 'ACQ_echo_descr': '', 'ACQ_movie_descr': '', 'ACQ_fov': array([4. , 1.6625, 1.3 ]), 'ACQ_read_ext': 2.0, 'ACQ_slice_angle': 0.0, 'ACQ_slice_orient': 'Arbitrary_Oblique', 'ACQ_patient_pos': 'Head_Supine', 'ACQ_read_offset': -1.6, 'ACQ_phase1_offset': -0.9, 'ACQ_phase2_offset': 0.0, 'ACQ_slice_sepn': 1.0, 'ACQ_slice_sepn_mode': 'Contiguous', 'ACQ_slice_thick': 13.0, 'ACQ_slice_offset': 0.6, 'ACQ_obj_order': 0.0, 'ACQ_flip_angle': 180.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 10.6666666666667, 'ACQ_inter_echo_time': 5.33333333333333, 'ACQ_recov_time': 481.333333333333, 'ACQ_repetition_time': 500.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:15:56 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689963356.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 36.0593719482422, 'FRQLO3': 0.0, 'DATE': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([ 7.89938146, -2.08857153, 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 50. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 7.89938146, 17.49518798, 30. , 30. , 30. ,\n", + " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': 'hermite.rfc', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_medium', 'DECIM': 100.0, 'DSPFVS': 23.0, 'ACQ_scan_shift': -72.0, 'DEOSC': 1165.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 0.55463264, 0.55463264, 0.55463264],\n", + " [-0.46930455, -0.46930455, -0.46930455],\n", + " [ 0.55463264, 0.55463264, 0.55463264],\n", + " [15. , 15. , 15. ],\n", + " [11.17723739, 11.17723739, 11.17723739],\n", + " [ 7.85427492, 7.85427492, 7.85427492],\n", + " [ 2.76194283, 2.76194283, 2.76194283],\n", + " [-2.32374998, -2.32374998, -2.32374998],\n", + " [-2.76194283, -2.76194283, -2.76194283],\n", + " [ 2.32374998, 2.32374998, 2.32374998],\n", + " [ 7. , 7. , 7. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[-0., -0., 1.],\n", + " [ 1., -0., 0.],\n", + " [ 0., 1., 0.]]]), 'NSLICES': 1.0, 'ACQ_rare_factor': 4.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1., -1.]), 'ACQ_spatial_size_1': 36.0, 'ACQ_spatial_phase_1': array([-0.73684211, -0.26315789, 0.21052632, 0.68421053, -0.68421053,\n", + " -0.21052632, 0.26315789, 0.73684211, -0.63157895, -0.15789474,\n", + " 0.31578947, 0.78947368, -0.57894737, -0.10526316, 0.36842105,\n", + " 0.84210526, -0.52631579, -0.05263158, 0.42105263, 0.89473684,\n", + " -0.47368421, 0. , 0.47368421, -0.94736842, -0.42105263,\n", + " 0.05263158, 0.52631579, -0.89473684, -0.36842105, 0.10526316,\n", + " 0.57894737, -0.84210526, -0.31578947, 0.15789474, 0.63157895,\n", + " -0.78947368]), 'ACQ_spatial_size_2': 25.0, 'ACQ_spatial_phase_2': array([-0.96, -0.88, -0.8 , -0.72, -0.64, -0.56, -0.48, -0.4 , -0.32,\n", + " -0.24, -0.16, -0.08, 0. , 0.08, 0.16, 0.24, 0.32, 0.4 ,\n", + " 0.48, 0.56, 0.64, 0.72, 0.8 , 0.88, 0.96]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.33333333333333, 'EffectiveTE': 10.6666666666667, 'RareFactor': 4.0, 'RepetitionTime': 500.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h1m52s500ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncZfAccel2': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncOrder2': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncStart2': -1.0, 'EncMatrix': array([80., 36., 25.]), 'EncSteps1': array([-14., -5., 4., 13., -13., -4., 5., 14., -12., -3., 6.,\n", + " 15., -11., -2., 7., 16., -10., -1., 8., 17., -9., 0.,\n", + " 9., -18., -8., 1., 10., -17., -7., 2., 11., -16., -6.,\n", + " 3., 12., -15.]), 'EncSteps2': array([-12., -11., -10., -9., -8., -7., -6., -5., -4., -3., -2.,\n", + " -1., 0., 1., 2., 3., 4., 5., 6., 7., 8., 9.,\n", + " 10., 11., 12.]), 'EncCentralStep1': 2.0, 'EncCentralStep2': 1.0, 'EncTotalAccel': 1.05555555555556, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.75, 'MinEchoTime': 4.47333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 7.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Medium', 'DigRes': 20.0, 'DigDw': 0.005, 'DigSw': 200000.0, 'DigNp': 80.0, 'DigShift': 36.0, 'DigGroupDel': 0.18, 'DigDur': 0.4, 'DigEndDelMin': 0.05, 'DigEndDelOpt': 0.0824032403240323, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '3D', 'Isotropic': 'Isotropic_None', 'Fov': array([20., 14., 13.]), 'FovCm': array([2. , 1.4, 1.3]), 'SpatResol': array([0.5 , 0.4375, 0.52 ]), 'Matrix': array([40., 32., 25.]), 'MinMatrix': array([32., 32., 8.]), 'MaxMatrix': array([2048., 2048., 256.]), 'AntiAlias': array([2. , 1.1875, 1. ]), 'MaxAntiAlias': array([2., 8., 8.]), 'SliceThick': 13.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': 0.0, 'NSPacks': 1.0, 'SPackArrNSlices': 1.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'H_F', 'SPackArrReadOffset': -1.6, 'SPackArrPhase1Offset': -0.9, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 0.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': -12.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[-0., -0., 1.],\n", + " [ 1., -0., 0.],\n", + " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([15. , 10.74354067, 10.21913876]), 'FovSatOffset': array([-13.2 , -13.3 , 11.20023923]), 'FovSatSliceVec': array([[0., 1., 0.],\n", + " [1., 0., 0.],\n", + " [1., 0., 0.]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[0. , 0.00565508, 0. ],\n", + " [0.00789555, 0. , 0. ],\n", + " [0.00830072, 0. , 0. ]]), 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 7.0, 'FovSatModuleTime': 9.7, 'FovSatFL': array([-4752. , -6684.94700276, 5918.43337391]), 'SatD0': 0.00015, 'SatD1': 1e-05, 'SatD2': 0.002, 'SatP0': 1000.0, 'SatLp0': 3.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 0.0, 'InFlowSatGap': 0.0, 'InFlowSatSide': 0.0, 'FlowSatPulse': '1 0.001 90 30 100 0 100 LIB_EXCITATION', 'FlowSatDeriveGainMode': 'By_DeriveGains', 'InFlowSatSpoilTime': 2.0, 'InFlowSatSpoilGrad': 20.0, 'InFlowSatModuleTime': 0.0, 'SfD0': 1e-06, 'SfD1': 1e-06, 'SfD2': 1e-06, 'SfP0': 10.0, 'SfLp0': 0.0, 'MotionSupOnOff': 'Off', 'FlipBackOnOff': 'Off', 'EchoTime1': 10.6666666666667, 'EchoTime2': 10.6666666666667, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'END': ''}, 'recons': {'1': {'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([80., 36., 25.]), 'RECO_ft_size': array([80., 38., 25.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([40., 32., 25.]), 'RECO_offset': array([[20.],\n", + " [ 3.],\n", + " [ 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC NO_BC', 'RECO_bc_start': array([60., 27., 19.]), 'RECO_bc_len': array([20., 9., 6.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0., 0.]), 'RECO_qopts': 'CONJ_AND_QNEG NO_QOPTS NO_QOPTS', 'RECO_wdw_mode': 'NO_WDW NO_WDW NO_WDW', 'RECO_lb': array([-0.5, -0.5, -0.5]), 'RECO_sw': array([2.e+05, 1.e+00, 1.e+00]), 'RECO_gb': array([0.5, 0.5, 0.5]), 'RECO_sbs': array([1., 1., 1.]), 'RECO_tm1': array([0.25, 0.25, 0.25]), 'RECO_tm2': array([0.75, 0.75, 0.75]), 'RECO_ft_mode': 'COMPLEX_FT COMPLEX_FT COMPLEX_FT', 'RECO_pc_mode': 'NO_PC NO_PC NO_PC', 'RECO_pc_lin': ['(0, 0)', '(0, 0)', '(0, 0)'], 'RECO_rotate': array([[0. ],\n", + " [0.44736842],\n", + " [0.44 ]]), 'RECO_ppc_mode': 'NO_PPC', 'RECO_ref_image': 0.0, 'RECO_nr_supports': 0.4, 'RECO_sig_threshold': 0.15, 'RECO_ppc_degree': 1.0, 'RECO_ppc_coeffs': array([[[0., 0.],\n", + " [0., 0.],\n", + " [0., 0.]]]), 'RECO_dc_elim': 'No', 'RECO_transposition': 1.0, 'RECO_image_type': 'MAGNITUDE_IMAGE', 'RECO_image_threshold': 0.15, 'RECO_ir_scale': 10.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_globex': 0.0, 'RECO_minima': 26.0, 'RECO_maxima': 32766.0, 'RECO_map_min': -2765566.68516245, 'RECO_map_max': 2765566.68516245, 'RECO_map_offset': 0.0, 'RECO_map_slope': 0.0118482047691941, 'RECO_byte_order': 'littleEndian', 'RECO_time': '11:15:56 21 Jul 2023', 'RECO_abs_time': 1689963356.0, 'RECO_base_image_uid': '2.16.756.5.5.100.380435303.14105.1689963471.13', 'GS_reco_display': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'END': ''}, 'visu_pars': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'VisuVersion': 1.0, 'VisuUid': '2.16.756.5.5.100.380435303.14105.1689963471.13', 'VisuCreator': 'ParaVision', 'VisuCreatorVersion': '5.1', 'VisuCreationDate': '11:15:56 21 Jul 2023', 'VisuCoreFrameCount': 1.0, 'VisuCoreDim': 3.0, 'VisuCoreSize': array([32., 40., 25.]), 'VisuCoreDimDesc': 'spatial spatial spatial', 'VisuCoreExtent': array([14., 20., 13.]), 'VisuCoreFrameThickness': 13.0, 'VisuCoreUnits': ['mm', 'mm', 'mm'], 'VisuCoreOrientation': array([[ 1., 0., 0., 0., 0., -1., 0., 1., 0.]]), 'VisuCorePosition': array([[-6.1, -7.1, 8.4]]), 'VisuCoreDataMin': 26.0, 'VisuCoreDataMax': 32766.0, 'VisuCoreDataOffs': 0.0, 'VisuCoreDataSlope': 84.4009720865093, 'VisuCoreFrameType': 'MAGNITUDE_IMAGE', 'VisuCoreWordType': '_16BIT_SGN_INT', 'VisuCoreByteOrder': 'littleEndian', 'VisuCoreDiskSliceOrder': 'disk_reverse_slice_order', 'VisuSubjectName': 'DL_AI2', 'VisuSubjectId': 'DL_AI2', 'VisuSubjectBirthDate': '', 'VisuSubjectSex': 'FEMALE', 'VisuSubjectComment': 'DL_AI2', 'VisuStudyUid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'VisuStudyDate': '11:51:04 21 Jul 2023', 'VisuStudyId': '684811_2023_07_21', 'VisuStudyNumber': 2.0, 'VisuSubjectWeight': 5.0, 'VisuStudyReferringPhysician': '', 'VisuStudyDescription': '684811_2023_07_21', 'VisuSeriesNumber': 262145.0, 'VisuSubjectPosition': 'Head_Supine', 'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:15:56 21 Jul 2023', 'VisuAcqEchoTrainLength': 4.0, 'VisuAcqSequenceName': '(RARE (pvm))', 'VisuAcqNumberOfAverages': 1.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 500.0, 'VisuAcqPhaseEncSteps': 36.0, 'VisuAcqPixelBandwidth': 2500.0, 'VisuAcqFlipAngle': 180.0, 'VisuAcqSize': array([36., 80., 25.]), 'VisuAcqImageSizeAccellerated': 'Yes', 'VisuAcqImagePhaseEncDir': 'row_slice_dir', 'VisuAcqEchoTime': 10.6666666666667, 'VisuAcquisitionProtocol': '07b_RARE_8_3D_T2w_cor', 'VisuAcqScanTime': 112500.0, 'END': ''}}}}, '5': {'acqp': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'PULPROG': 'RARE.ppg', 'GRDPROG': '', 'ACQ_experiment_mode': 'SingleExperiment', 'ACQ_user_filter': 'No', 'ACQ_DS_enabled': 'Yes', 'ACQ_switch_pll_enabled': 'No', 'ACQ_preload': 0.0, 'ACQ_dim': 3.0, 'ACQ_dim_desc': 'Spatial Spatial Spatial', 'ACQ_size': array([160., 36., 25.]), 'ACQ_ns_list_size': 1.0, 'ACQ_ns': 1.0, 'ACQ_phase_factor': 4.0, 'ACQ_scan_size': 'One_scan', 'NI': 1.0, 'NA': 1.0, 'NAE': 1.0, 'NR': 1.0, 'DS': 2.0, 'D': array([4.60092021e-01, 4.65000000e-04, 8.50000000e-04, 2.50000000e-05,\n", + " 1.00000000e-04, 3.00000000e-04, 5.50000000e-04, 0.00000000e+00,\n", + " 1.00000000e-05, 1.80000000e-03, 1.00000000e-05, 5.50000000e-04,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00]), 'P': array([1000. , 633.33333333, 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ]), 'PL': array([ 0., 120., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'TPQQ': ['(, 7.89938145571436, 0)', '(, -2.08857153290193, 0)', '(< >, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(< >, 30, 0)'], 'DPQQ': ['(<>, 50, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(, 7.89938145571436, 0)', '(< gauss512.exc>, 17.4951879761457, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)'], 'SW_h': 200000.0, 'SW': 333.618738468542, 'FW': 0.0, 'RG': 11.3, 'AQ_mod': 'qdig', 'DR': 20.0, 'PAPS': 'QP', 'PH_ref': 0.0, 'ACQ_BF_enable': 'Yes', 'BF1': 599.486710243222, 'SFO1': 599.486710243222, 'O1': 0.0, 'ACQ_O1_list_size': 1.0, 'ACQ_O1_list': 211.846153846154, 'ACQ_O1B_list_size': 1.0, 'ACQ_O1B_list': -9500.0, 'BF2': 599.6429484, 'SFO2': 599.6429484, 'O2': 0.0, 'ACQ_O2_list_size': 1.0, 'ACQ_O2_list': 0.0, 'BF3': 599.6429484, 'SFO3': 599.6429484, 'O3': 0.0, 'ACQ_O3_list_size': 1.0, 'ACQ_O3_list': 0.0, 'BF4': 599.6429484, 'SFO4': 599.6429484, 'O4': 0.0, 'BF5': 599.6429484, 'SFO5': 599.6429484, 'O5': 0.0, 'BF6': 599.6429484, 'SFO6': 599.6429484, 'O6': 0.0, 'BF7': 599.6429484, 'SFO7': 599.6429484, 'O7': 0.0, 'BF8': 599.6429484, 'SFO8': 599.6429484, 'O8': 0.0, 'NUC1': '1H', 'NUC2': 'off', 'NUC3': 'off', 'NUC4': 'off', 'NUC5': 'off', 'NUC6': 'off', 'NUC7': 'off', 'NUC8': 'off', 'NUCLEUS': '1H', 'ACQ_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'ACQ_coils': ['(, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<31P generic>, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)'], 'ACQ_coil_elements': ['(0, 3, -1, 1, 0, 0, 0, 0, 0, 0, <1H>, 0, noPin, preamp_probe, 0, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)', '(1, 3, -1, 1, 0, 0, 0, 0, 0, 0, <31P >, 0, noPin, preamp_probe, 3, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)'], 'ACQ_operation_mode': '[1H] TX/RX Volume', 'ACQ_Routing': 'RouteDefinedByCoil', 'L': array([0., 8., 9., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'ACQ_vd_list_size': 1.0, 'ACQ_vd_list': 1e-06, 'ACQ_vp_list_size': 1.0, 'ACQ_vp_list': 1e-06, 'ACQ_status': 'S040', 'ACQ_Routing_base': '1H', 'ACQ_protocol_location': 'DL_AI2', 'ACQ_protocol_name': '07b_RARE_8_3D_T2w_cor', 'ACQ_scan_name': '07b_RARE_8_3D_T2w_cor', 'ACQ_method': 'RARE', 'ACQ_completed': 'Yes', 'ACQ_pipe_status': 'Wrapup', 'ACQ_scans_completed': 0.0, 'ACQ_nr_completed': 1.0, 'ACQ_total_completed': 900.0, 'ACQ_word_size': '_32_BIT', 'NECHOES': 4.0, 'ACQ_n_echo_images': 1.0, 'ACQ_n_movie_frames': 1.0, 'ACQ_echo_descr': '', 'ACQ_movie_descr': '', 'ACQ_fov': array([4. , 1.6625, 1.3 ]), 'ACQ_read_ext': 2.0, 'ACQ_slice_angle': 0.0, 'ACQ_slice_orient': 'Arbitrary_Oblique', 'ACQ_patient_pos': 'Head_Supine', 'ACQ_read_offset': -1.9, 'ACQ_phase1_offset': -0.9, 'ACQ_phase2_offset': 0.0, 'ACQ_slice_sepn': 1.0, 'ACQ_slice_sepn_mode': 'Contiguous', 'ACQ_slice_thick': 13.0, 'ACQ_slice_offset': 0.6, 'ACQ_obj_order': 0.0, 'ACQ_flip_angle': 180.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 10.6666666666667, 'ACQ_inter_echo_time': 5.33333333333333, 'ACQ_recov_time': 481.333333333333, 'ACQ_repetition_time': 500.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:19:44 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689963584.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 36.0593719482422, 'FRQLO3': 0.0, 'DATE': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([ 7.89938146, -2.08857153, 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 50. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 7.89938146, 17.49518798, 30. , 30. , 30. ,\n", + " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': 'hermite.rfc', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_medium', 'DECIM': 100.0, 'DSPFVS': 23.0, 'ACQ_scan_shift': -72.0, 'DEOSC': 1165.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 0.55463264, 0.55463264, 0.55463264],\n", + " [-0.46930455, -0.46930455, -0.46930455],\n", + " [ 0.55463264, 0.55463264, 0.55463264],\n", + " [15. , 15. , 15. ],\n", + " [11.17723739, 11.17723739, 11.17723739],\n", + " [ 7.85427492, 7.85427492, 7.85427492],\n", + " [ 2.76194283, 2.76194283, 2.76194283],\n", + " [-2.32374998, -2.32374998, -2.32374998],\n", + " [-2.76194283, -2.76194283, -2.76194283],\n", + " [ 2.32374998, 2.32374998, 2.32374998],\n", + " [ 7. , 7. , 7. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[-0., -0., 1.],\n", + " [ 1., -0., 0.],\n", + " [ 0., 1., 0.]]]), 'NSLICES': 1.0, 'ACQ_rare_factor': 4.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1., -1.]), 'ACQ_spatial_size_1': 36.0, 'ACQ_spatial_phase_1': array([-0.73684211, -0.26315789, 0.21052632, 0.68421053, -0.68421053,\n", + " -0.21052632, 0.26315789, 0.73684211, -0.63157895, -0.15789474,\n", + " 0.31578947, 0.78947368, -0.57894737, -0.10526316, 0.36842105,\n", + " 0.84210526, -0.52631579, -0.05263158, 0.42105263, 0.89473684,\n", + " -0.47368421, 0. , 0.47368421, -0.94736842, -0.42105263,\n", + " 0.05263158, 0.52631579, -0.89473684, -0.36842105, 0.10526316,\n", + " 0.57894737, -0.84210526, -0.31578947, 0.15789474, 0.63157895,\n", + " -0.78947368]), 'ACQ_spatial_size_2': 25.0, 'ACQ_spatial_phase_2': array([-0.96, -0.88, -0.8 , -0.72, -0.64, -0.56, -0.48, -0.4 , -0.32,\n", + " -0.24, -0.16, -0.08, 0. , 0.08, 0.16, 0.24, 0.32, 0.4 ,\n", + " 0.48, 0.56, 0.64, 0.72, 0.8 , 0.88, 0.96]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.33333333333333, 'EffectiveTE': 10.6666666666667, 'RareFactor': 4.0, 'RepetitionTime': 500.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h1m52s500ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncZfAccel2': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncOrder2': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncStart2': -1.0, 'EncMatrix': array([80., 36., 25.]), 'EncSteps1': array([-14., -5., 4., 13., -13., -4., 5., 14., -12., -3., 6.,\n", + " 15., -11., -2., 7., 16., -10., -1., 8., 17., -9., 0.,\n", + " 9., -18., -8., 1., 10., -17., -7., 2., 11., -16., -6.,\n", + " 3., 12., -15.]), 'EncSteps2': array([-12., -11., -10., -9., -8., -7., -6., -5., -4., -3., -2.,\n", + " -1., 0., 1., 2., 3., 4., 5., 6., 7., 8., 9.,\n", + " 10., 11., 12.]), 'EncCentralStep1': 2.0, 'EncCentralStep2': 1.0, 'EncTotalAccel': 1.05555555555556, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.75, 'MinEchoTime': 4.47333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 7.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Medium', 'DigRes': 20.0, 'DigDw': 0.005, 'DigSw': 200000.0, 'DigNp': 80.0, 'DigShift': 36.0, 'DigGroupDel': 0.18, 'DigDur': 0.4, 'DigEndDelMin': 0.05, 'DigEndDelOpt': 0.0824032403240323, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '3D', 'Isotropic': 'Isotropic_None', 'Fov': array([20., 14., 13.]), 'FovCm': array([2. , 1.4, 1.3]), 'SpatResol': array([0.5 , 0.4375, 0.52 ]), 'Matrix': array([40., 32., 25.]), 'MinMatrix': array([32., 32., 8.]), 'MaxMatrix': array([2048., 2048., 256.]), 'AntiAlias': array([2. , 1.1875, 1. ]), 'MaxAntiAlias': array([2., 8., 8.]), 'SliceThick': 13.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': 0.0, 'NSPacks': 1.0, 'SPackArrNSlices': 1.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'H_F', 'SPackArrReadOffset': -1.9, 'SPackArrPhase1Offset': -0.9, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 0.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': -12.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[-0., -0., 1.],\n", + " [ 1., -0., 0.],\n", + " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([15. , 10.74354067, 10.21913876]), 'FovSatOffset': array([-13.2 , -13.3 , 11.20023923]), 'FovSatSliceVec': array([[0.000000e+00, 1.000000e+00, 6.123234e-17],\n", + " [1.000000e+00, 0.000000e+00, 0.000000e+00],\n", + " [1.000000e+00, 0.000000e+00, 0.000000e+00]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[0.00000000e+00, 5.65507795e-03, 3.46273655e-19],\n", + " [7.89555062e-03, 0.00000000e+00, 0.00000000e+00],\n", + " [8.30071606e-03, 0.00000000e+00, 0.00000000e+00]]), 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 7.0, 'FovSatModuleTime': 9.7, 'FovSatFL': array([-4752. , -6684.94700276, 5918.43337391]), 'SatD0': 0.00015, 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'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_medium', 'DECIM': 100.0, 'DSPFVS': 23.0, 'ACQ_scan_shift': -72.0, 'DEOSC': 1165.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 0.55463264, 0.55463264, 0.55463264],\n", + " [-0.46930455, -0.46930455, -0.46930455],\n", + " [ 0.55463264, 0.55463264, 0.55463264],\n", + " [15. , 15. , 15. ],\n", + " [11.17723739, 11.17723739, 11.17723739],\n", + " [ 7.85427492, 7.85427492, 7.85427492],\n", + " [ 2.76194283, 2.76194283, 2.76194283],\n", + " [-2.32374998, -2.32374998, -2.32374998],\n", + " [-2.76194283, -2.76194283, -2.76194283],\n", + " [ 2.32374998, 2.32374998, 2.32374998],\n", + " [ 7. , 7. , 7. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[-0., -0., 1.],\n", + " [ 1., -0., 0.],\n", + " [ 0., 1., 0.]]]), 'NSLICES': 1.0, 'ACQ_rare_factor': 4.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1., -1.]), 'ACQ_spatial_size_1': 36.0, 'ACQ_spatial_phase_1': array([-0.73684211, -0.26315789, 0.21052632, 0.68421053, -0.68421053,\n", + " -0.21052632, 0.26315789, 0.73684211, -0.63157895, -0.15789474,\n", + " 0.31578947, 0.78947368, -0.57894737, -0.10526316, 0.36842105,\n", + " 0.84210526, -0.52631579, -0.05263158, 0.42105263, 0.89473684,\n", + " -0.47368421, 0. , 0.47368421, -0.94736842, -0.42105263,\n", + " 0.05263158, 0.52631579, -0.89473684, -0.36842105, 0.10526316,\n", + " 0.57894737, -0.84210526, -0.31578947, 0.15789474, 0.63157895,\n", + " -0.78947368]), 'ACQ_spatial_size_2': 25.0, 'ACQ_spatial_phase_2': array([-0.96, -0.88, -0.8 , -0.72, -0.64, -0.56, -0.48, -0.4 , -0.32,\n", + " -0.24, -0.16, -0.08, 0. , 0.08, 0.16, 0.24, 0.32, 0.4 ,\n", + " 0.48, 0.56, 0.64, 0.72, 0.8 , 0.88, 0.96]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.33333333333333, 'EffectiveTE': 10.6666666666667, 'RareFactor': 4.0, 'RepetitionTime': 500.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h1m52s500ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncZfAccel2': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncOrder2': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncStart2': -1.0, 'EncMatrix': array([80., 36., 25.]), 'EncSteps1': array([-14., -5., 4., 13., -13., -4., 5., 14., -12., -3., 6.,\n", + " 15., -11., -2., 7., 16., -10., -1., 8., 17., -9., 0.,\n", + " 9., -18., -8., 1., 10., -17., -7., 2., 11., -16., -6.,\n", + " 3., 12., -15.]), 'EncSteps2': array([-12., -11., -10., -9., -8., -7., -6., -5., -4., -3., -2.,\n", + " -1., 0., 1., 2., 3., 4., 5., 6., 7., 8., 9.,\n", + " 10., 11., 12.]), 'EncCentralStep1': 2.0, 'EncCentralStep2': 1.0, 'EncTotalAccel': 1.05555555555556, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.75, 'MinEchoTime': 4.47333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 7.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Medium', 'DigRes': 20.0, 'DigDw': 0.005, 'DigSw': 200000.0, 'DigNp': 80.0, 'DigShift': 36.0, 'DigGroupDel': 0.18, 'DigDur': 0.4, 'DigEndDelMin': 0.05, 'DigEndDelOpt': 0.0824032403240323, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '3D', 'Isotropic': 'Isotropic_None', 'Fov': array([20., 14., 13.]), 'FovCm': array([2. , 1.4, 1.3]), 'SpatResol': array([0.5 , 0.4375, 0.52 ]), 'Matrix': array([40., 32., 25.]), 'MinMatrix': array([32., 32., 8.]), 'MaxMatrix': array([2048., 2048., 256.]), 'AntiAlias': array([2. , 1.1875, 1. ]), 'MaxAntiAlias': array([2., 8., 8.]), 'SliceThick': 13.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': 0.0, 'NSPacks': 1.0, 'SPackArrNSlices': 1.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'H_F', 'SPackArrReadOffset': -2.1, 'SPackArrPhase1Offset': -0.9, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 0.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': -12.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[-0., -0., 1.],\n", + " [ 1., -0., 0.],\n", + " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([15. , 10.74354067, 10.21913876]), 'FovSatOffset': array([-13.2 , -13.3 , 11.20023923]), 'FovSatSliceVec': array([[0.000000e+00, 1.000000e+00, 6.123234e-17],\n", + " [1.000000e+00, 0.000000e+00, 0.000000e+00],\n", + " [1.000000e+00, 0.000000e+00, 0.000000e+00]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[0.00000000e+00, 5.65507795e-03, 3.46273655e-19],\n", + " [7.89555062e-03, 0.00000000e+00, 0.00000000e+00],\n", + " [8.30071606e-03, 0.00000000e+00, 0.00000000e+00]]), 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 7.0, 'FovSatModuleTime': 9.7, 'FovSatFL': array([-4752. , -6684.94700276, 5918.43337391]), 'SatD0': 0.00015, 'SatD1': 1e-05, 'SatD2': 0.002, 'SatP0': 1000.0, 'SatLp0': 3.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 0.0, 'InFlowSatGap': 0.0, 'InFlowSatSide': 0.0, 'FlowSatPulse': '1 0.001 90 30 100 0 100 LIB_EXCITATION', 'FlowSatDeriveGainMode': 'By_DeriveGains', 'InFlowSatSpoilTime': 2.0, 'InFlowSatSpoilGrad': 20.0, 'InFlowSatModuleTime': 0.0, 'SfD0': 1e-06, 'SfD1': 1e-06, 'SfD2': 1e-06, 'SfP0': 10.0, 'SfLp0': 0.0, 'MotionSupOnOff': 'Off', 'FlipBackOnOff': 'Off', 'EchoTime1': 10.6666666666667, 'EchoTime2': 10.6666666666667, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'END': ''}, 'recons': {'1': {'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([80., 36., 25.]), 'RECO_ft_size': array([80., 38., 25.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([40., 32., 25.]), 'RECO_offset': array([[20.],\n", + " [ 3.],\n", + " [ 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC NO_BC', 'RECO_bc_start': array([60., 27., 19.]), 'RECO_bc_len': array([20., 9., 6.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0., 0.]), 'RECO_qopts': 'CONJ_AND_QNEG NO_QOPTS NO_QOPTS', 'RECO_wdw_mode': 'NO_WDW NO_WDW NO_WDW', 'RECO_lb': array([-0.5, -0.5, -0.5]), 'RECO_sw': array([2.e+05, 1.e+00, 1.e+00]), 'RECO_gb': array([0.5, 0.5, 0.5]), 'RECO_sbs': array([1., 1., 1.]), 'RECO_tm1': array([0.25, 0.25, 0.25]), 'RECO_tm2': array([0.75, 0.75, 0.75]), 'RECO_ft_mode': 'COMPLEX_FT COMPLEX_FT COMPLEX_FT', 'RECO_pc_mode': 'NO_PC NO_PC NO_PC', 'RECO_pc_lin': ['(0, 0)', '(0, 0)', '(0, 0)'], 'RECO_rotate': array([[0. ],\n", + " [0.44736842],\n", + " [0.44 ]]), 'RECO_ppc_mode': 'NO_PPC', 'RECO_ref_image': 0.0, 'RECO_nr_supports': 0.4, 'RECO_sig_threshold': 0.15, 'RECO_ppc_degree': 1.0, 'RECO_ppc_coeffs': array([[[0., 0.],\n", + " [0., 0.],\n", + " [0., 0.]]]), 'RECO_dc_elim': 'No', 'RECO_transposition': 1.0, 'RECO_image_type': 'MAGNITUDE_IMAGE', 'RECO_image_threshold': 0.15, 'RECO_ir_scale': 10.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_globex': 0.0, 'RECO_minima': 26.0, 'RECO_maxima': 32766.0, 'RECO_map_min': -2806357.20208485, 'RECO_map_max': 2806357.20208485, 'RECO_map_offset': 0.0, 'RECO_map_slope': 0.0116759901866317, 'RECO_byte_order': 'littleEndian', 'RECO_time': '11:24:09 21 Jul 2023', 'RECO_abs_time': 1689963849.0, 'RECO_base_image_uid': '2.16.756.5.5.100.380435303.14105.1689963964.15', 'GS_reco_display': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'END': ''}, 'visu_pars': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'VisuVersion': 1.0, 'VisuUid': '2.16.756.5.5.100.380435303.14105.1689963964.15', 'VisuCreator': 'ParaVision', 'VisuCreatorVersion': '5.1', 'VisuCreationDate': '11:24:09 21 Jul 2023', 'VisuCoreFrameCount': 1.0, 'VisuCoreDim': 3.0, 'VisuCoreSize': array([32., 40., 25.]), 'VisuCoreDimDesc': 'spatial spatial spatial', 'VisuCoreExtent': array([14., 20., 13.]), 'VisuCoreFrameThickness': 13.0, 'VisuCoreUnits': ['mm', 'mm', 'mm'], 'VisuCoreOrientation': array([[ 1., 0., 0., 0., 0., -1., 0., 1., 0.]]), 'VisuCorePosition': array([[-6.1, -7.1, 7.9]]), 'VisuCoreDataMin': 26.0, 'VisuCoreDataMax': 32766.0, 'VisuCoreDataOffs': 0.0, 'VisuCoreDataSlope': 85.6458410820644, 'VisuCoreFrameType': 'MAGNITUDE_IMAGE', 'VisuCoreWordType': '_16BIT_SGN_INT', 'VisuCoreByteOrder': 'littleEndian', 'VisuCoreDiskSliceOrder': 'disk_reverse_slice_order', 'VisuSubjectName': 'DL_AI2', 'VisuSubjectId': 'DL_AI2', 'VisuSubjectBirthDate': '', 'VisuSubjectSex': 'FEMALE', 'VisuSubjectComment': 'DL_AI2', 'VisuStudyUid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'VisuStudyDate': '11:51:04 21 Jul 2023', 'VisuStudyId': '684811_2023_07_21', 'VisuStudyNumber': 2.0, 'VisuSubjectWeight': 5.0, 'VisuStudyReferringPhysician': '', 'VisuStudyDescription': '684811_2023_07_21', 'VisuSeriesNumber': 393217.0, 'VisuSubjectPosition': 'Head_Supine', 'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuAcqSoftwareVersion': '5.1', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:24:09 21 Jul 2023', 'VisuAcqEchoTrainLength': 4.0, 'VisuAcqSequenceName': '(RARE (pvm))', 'VisuAcqNumberOfAverages': 1.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 500.0, 'VisuAcqPhaseEncSteps': 36.0, 'VisuAcqPixelBandwidth': 2500.0, 'VisuAcqFlipAngle': 180.0, 'VisuAcqSize': array([36., 80., 25.]), 'VisuAcqImageSizeAccellerated': 'Yes', 'VisuAcqImagePhaseEncDir': 'row_slice_dir', 'VisuAcqEchoTime': 10.6666666666667, 'VisuAcquisitionProtocol': '07b_RARE_8_3D_T2w_cor', 'VisuAcqScanTime': 112500.0, 'END': ''}}}}, '7': {'acqp': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'PULPROG': 'RARE.ppg', 'GRDPROG': '', 'ACQ_experiment_mode': 'SingleExperiment', 'ACQ_user_filter': 'No', 'ACQ_DS_enabled': 'Yes', 'ACQ_switch_pll_enabled': 'No', 'ACQ_preload': 0.0, 'ACQ_dim': 3.0, 'ACQ_dim_desc': 'Spatial Spatial Spatial', 'ACQ_size': array([800., 164., 130.]), 'ACQ_ns_list_size': 1.0, 'ACQ_ns': 1.0, 'ACQ_phase_factor': 4.0, 'ACQ_scan_size': 'One_scan', 'NI': 1.0, 'NA': 2.0, 'NAE': 1.0, 'NR': 1.0, 'DS': 2.0, 'D': array([4.60092021e-01, 4.65000000e-04, 5.00000000e-05, 2.50000000e-05,\n", + " 1.00000000e-04, 3.00000000e-04, 5.50000000e-04, 0.00000000e+00,\n", + " 1.00000000e-05, 1.80000000e-03, 1.00000000e-05, 5.50000000e-04,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", + " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00]), 'P': array([1000. , 633.33333333, 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ,\n", + " 0. , 0. , 0. , 0. ]), 'PL': array([ 0., 120., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'TPQQ': ['(, 7.89938145571436, 0)', '(, -2.08857153290193, 0)', '(< >, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(< >, 30, 0)'], 'DPQQ': ['(<>, 50, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(, 7.89938145571436, 0)', '(< gauss512.exc>, 17.4951879761457, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)'], 'SW_h': 200000.0, 'SW': 333.618738468542, 'FW': 0.0, 'RG': 11.3, 'AQ_mod': 'qdig', 'DR': 20.0, 'PAPS': 'QP', 'PH_ref': 0.0, 'ACQ_BF_enable': 'Yes', 'BF1': 599.486710243222, 'SFO1': 599.486710243222, 'O1': 0.0, 'ACQ_O1_list_size': 1.0, 'ACQ_O1_list': 211.846153846154, 'ACQ_O1B_list_size': 1.0, 'ACQ_O1B_list': -10500.0, 'BF2': 599.6429484, 'SFO2': 599.6429484, 'O2': 0.0, 'ACQ_O2_list_size': 1.0, 'ACQ_O2_list': 0.0, 'BF3': 599.6429484, 'SFO3': 599.6429484, 'O3': 0.0, 'ACQ_O3_list_size': 1.0, 'ACQ_O3_list': 0.0, 'BF4': 599.6429484, 'SFO4': 599.6429484, 'O4': 0.0, 'BF5': 599.6429484, 'SFO5': 599.6429484, 'O5': 0.0, 'BF6': 599.6429484, 'SFO6': 599.6429484, 'O6': 0.0, 'BF7': 599.6429484, 'SFO7': 599.6429484, 'O7': 0.0, 'BF8': 599.6429484, 'SFO8': 599.6429484, 'O8': 0.0, 'NUC1': '1H', 'NUC2': 'off', 'NUC3': 'off', 'NUC4': 'off', 'NUC5': 'off', 'NUC6': 'off', 'NUC7': 'off', 'NUC8': 'off', 'NUCLEUS': '1H', 'ACQ_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'ACQ_coils': ['(, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<31P generic>, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)'], 'ACQ_coil_elements': ['(0, 3, -1, 1, 0, 0, 0, 0, 0, 0, <1H>, 0, noPin, preamp_probe, 0, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)', '(1, 3, -1, 1, 0, 0, 0, 0, 0, 0, <31P >, 0, noPin, preamp_probe, 3, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)'], 'ACQ_operation_mode': '[1H] TX/RX Volume', 'ACQ_Routing': 'RouteDefinedByCoil', 'L': array([ 0., 8., 41., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0.]), 'ACQ_vd_list_size': 1.0, 'ACQ_vd_list': 1e-06, 'ACQ_vp_list_size': 1.0, 'ACQ_vp_list': 1e-06, 'ACQ_status': 'S040', 'ACQ_Routing_base': '1H', 'ACQ_protocol_location': 'DL_AI2', 'ACQ_protocol_name': '07c_RARE_8_3D_T2w_cor', 'ACQ_scan_name': '07c_RARE_8_3D_T2w_cor', 'ACQ_method': 'RARE', 'ACQ_completed': 'Yes', 'ACQ_pipe_status': 'Wrapup', 'ACQ_scans_completed': 0.0, 'ACQ_nr_completed': 1.0, 'ACQ_total_completed': 21320.0, 'ACQ_word_size': '_32_BIT', 'NECHOES': 4.0, 'ACQ_n_echo_images': 1.0, 'ACQ_n_movie_frames': 1.0, 'ACQ_echo_descr': '', 'ACQ_movie_descr': '', 'ACQ_fov': array([4. , 1.66, 1.3 ]), 'ACQ_read_ext': 2.0, 'ACQ_slice_angle': 0.0, 'ACQ_slice_orient': 'Arbitrary_Oblique', 'ACQ_patient_pos': 'Head_Supine', 'ACQ_read_offset': -2.1, 'ACQ_phase1_offset': -0.9, 'ACQ_phase2_offset': 0.0, 'ACQ_slice_sepn': 1.0, 'ACQ_slice_sepn_mode': 'Contiguous', 'ACQ_slice_thick': 13.0, 'ACQ_slice_offset': 0.6, 'ACQ_obj_order': 0.0, 'ACQ_flip_angle': 180.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 10.6666666666667, 'ACQ_inter_echo_time': 5.33333333333333, 'ACQ_recov_time': 481.333333333333, 'ACQ_repetition_time': 500.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:27:33 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689964053.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 68.0593719482422, 'FRQLO3': 0.0, 'DATE': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([ 7.89938146, -2.08857153, 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 50. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 30. , 30. , 30. , 30. , 30. ,\n", + " 7.89938146, 17.49518798, 30. , 30. , 30. ,\n", + " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", + " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': 'hermite.rfc', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_standard', 'DECIM': 100.0, 'DSPFVS': 20.0, 'ACQ_scan_shift': -136.0, 'DEOSC': 2765.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", + " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 0.55463264, 0.55463264, 0.55463264],\n", + " [ -0.46930455, -0.46930455, -0.46930455],\n", + " [ 0.55463264, 0.55463264, 0.55463264],\n", + " [ 15. , 15. , 15. ],\n", + " [ 20.8440373 , 20.8440373 , 20.8440373 ],\n", + " [ 7.85427492, 7.85427492, 7.85427492],\n", + " [ 12.08349988, 12.08349988, 12.08349988],\n", + " [-12.08349988, -12.08349988, -12.08349988],\n", + " [-12.08349988, -12.08349988, -12.08349988],\n", + " [ 12.08349988, 12.08349988, 12.08349988],\n", + " [ 7. , 7. , 7. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[-0., -0., 1.],\n", + " [ 1., -0., 0.],\n", + " [ 0., 1., 0.]]]), 'NSLICES': 1.0, 'ACQ_rare_factor': 4.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1., -1.]), 'ACQ_spatial_size_1': 164.0, 'ACQ_spatial_phase_1': array([-0.74698795, -0.25301205, 0.24096386, 0.73493976, -0.73493976,\n", + " -0.24096386, 0.25301205, 0.74698795, -0.72289157, -0.22891566,\n", + " 0.26506024, 0.75903614, -0.71084337, -0.21686747, 0.27710843,\n", + " 0.77108434, -0.69879518, -0.20481928, 0.28915663, 0.78313253,\n", + " -0.68674699, -0.19277108, 0.30120482, 0.79518072, -0.6746988 ,\n", + " -0.18072289, 0.31325301, 0.80722892, -0.6626506 , -0.1686747 ,\n", + " 0.3253012 , 0.81927711, -0.65060241, -0.15662651, 0.3373494 ,\n", + " 0.8313253 , -0.63855422, -0.14457831, 0.34939759, 0.84337349,\n", + " -0.62650602, -0.13253012, 0.36144578, 0.85542169, -0.61445783,\n", + " -0.12048193, 0.37349398, 0.86746988, -0.60240964, -0.10843373,\n", + " 0.38554217, 0.87951807, -0.59036145, -0.09638554, 0.39759036,\n", + " 0.89156627, -0.57831325, -0.08433735, 0.40963855, 0.90361446,\n", + " -0.56626506, -0.07228916, 0.42168675, 0.91566265, -0.55421687,\n", + " -0.06024096, 0.43373494, 0.92771084, -0.54216867, -0.04819277,\n", + " 0.44578313, 0.93975904, -0.53012048, -0.03614458, 0.45783133,\n", + " 0.95180723, -0.51807229, -0.02409639, 0.46987952, 0.96385542,\n", + " -0.5060241 , -0.01204819, 0.48192771, 0.97590361, -0.4939759 ,\n", + " 0. , 0.4939759 , -0.98795181, -0.48192771, 0.01204819,\n", + " 0.5060241 , -0.97590361, -0.46987952, 0.02409639, 0.51807229,\n", + " -0.96385542, -0.45783133, 0.03614458, 0.53012048, -0.95180723,\n", + " -0.44578313, 0.04819277, 0.54216867, -0.93975904, -0.43373494,\n", + " 0.06024096, 0.55421687, -0.92771084, -0.42168675, 0.07228916,\n", + " 0.56626506, -0.91566265, -0.40963855, 0.08433735, 0.57831325,\n", + " -0.90361446, -0.39759036, 0.09638554, 0.59036145, -0.89156627,\n", + " -0.38554217, 0.10843373, 0.60240964, -0.87951807, -0.37349398,\n", + " 0.12048193, 0.61445783, -0.86746988, -0.36144578, 0.13253012,\n", + " 0.62650602, -0.85542169, -0.34939759, 0.14457831, 0.63855422,\n", + " -0.84337349, -0.3373494 , 0.15662651, 0.65060241, -0.8313253 ,\n", + " -0.3253012 , 0.1686747 , 0.6626506 , -0.81927711, -0.31325301,\n", + " 0.18072289, 0.6746988 , -0.80722892, -0.30120482, 0.19277108,\n", + " 0.68674699, -0.79518072, -0.28915663, 0.20481928, 0.69879518,\n", + " -0.78313253, -0.27710843, 0.21686747, 0.71084337, -0.77108434,\n", + " -0.26506024, 0.22891566, 0.72289157, -0.75903614]), 'ACQ_spatial_size_2': 130.0, 'ACQ_spatial_phase_2': array([-1. , -0.98461538, -0.96923077, -0.95384615, -0.93846154,\n", + " -0.92307692, -0.90769231, -0.89230769, -0.87692308, -0.86153846,\n", + " -0.84615385, -0.83076923, -0.81538462, -0.8 , -0.78461538,\n", + " -0.76923077, -0.75384615, -0.73846154, -0.72307692, -0.70769231,\n", + " -0.69230769, -0.67692308, -0.66153846, -0.64615385, -0.63076923,\n", + " -0.61538462, -0.6 , -0.58461538, -0.56923077, -0.55384615,\n", + " -0.53846154, -0.52307692, -0.50769231, -0.49230769, -0.47692308,\n", + " -0.46153846, -0.44615385, -0.43076923, -0.41538462, -0.4 ,\n", + " -0.38461538, -0.36923077, -0.35384615, -0.33846154, -0.32307692,\n", + " -0.30769231, -0.29230769, -0.27692308, -0.26153846, -0.24615385,\n", + " -0.23076923, -0.21538462, -0.2 , -0.18461538, -0.16923077,\n", + " -0.15384615, -0.13846154, -0.12307692, -0.10769231, -0.09230769,\n", + " -0.07692308, -0.06153846, -0.04615385, -0.03076923, -0.01538462,\n", + " 0. , 0.01538462, 0.03076923, 0.04615385, 0.06153846,\n", + " 0.07692308, 0.09230769, 0.10769231, 0.12307692, 0.13846154,\n", + " 0.15384615, 0.16923077, 0.18461538, 0.2 , 0.21538462,\n", + " 0.23076923, 0.24615385, 0.26153846, 0.27692308, 0.29230769,\n", + " 0.30769231, 0.32307692, 0.33846154, 0.35384615, 0.36923077,\n", + " 0.38461538, 0.4 , 0.41538462, 0.43076923, 0.44615385,\n", + " 0.46153846, 0.47692308, 0.49230769, 0.50769231, 0.52307692,\n", + " 0.53846154, 0.55384615, 0.56923077, 0.58461538, 0.6 ,\n", + " 0.61538462, 0.63076923, 0.64615385, 0.66153846, 0.67692308,\n", + " 0.69230769, 0.70769231, 0.72307692, 0.73846154, 0.75384615,\n", + " 0.76923077, 0.78461538, 0.8 , 0.81538462, 0.83076923,\n", + " 0.84615385, 0.86153846, 0.87692308, 0.89230769, 0.90769231,\n", + " 0.92307692, 0.93846154, 0.95384615, 0.96923077, 0.98461538]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.33333333333333, 'EffectiveTE': 10.6666666666667, 'RareFactor': 4.0, 'RepetitionTime': 500.0, 'NAverages': 2.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '1h28m50s0ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncZfAccel2': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncOrder2': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncStart2': -1.0, 'EncMatrix': array([400., 164., 130.]), 'EncSteps1': array([-62., -21., 20., 61., -61., -20., 21., 62., -60., -19., 22.,\n", + " 63., -59., -18., 23., 64., -58., -17., 24., 65., -57., -16.,\n", + " 25., 66., -56., -15., 26., 67., -55., -14., 27., 68., -54.,\n", + " -13., 28., 69., -53., -12., 29., 70., -52., -11., 30., 71.,\n", + " -51., -10., 31., 72., -50., -9., 32., 73., -49., -8., 33.,\n", + " 74., -48., -7., 34., 75., -47., -6., 35., 76., -46., -5.,\n", + " 36., 77., -45., -4., 37., 78., -44., -3., 38., 79., -43.,\n", + " -2., 39., 80., -42., -1., 40., 81., -41., 0., 41., -82.,\n", + " -40., 1., 42., -81., -39., 2., 43., -80., -38., 3., 44.,\n", + " -79., -37., 4., 45., -78., -36., 5., 46., -77., -35., 6.,\n", + " 47., -76., -34., 7., 48., -75., -33., 8., 49., -74., -32.,\n", + " 9., 50., -73., -31., 10., 51., -72., -30., 11., 52., -71.,\n", + " -29., 12., 53., -70., -28., 13., 54., -69., -27., 14., 55.,\n", + " -68., -26., 15., 56., -67., -25., 16., 57., -66., -24., 17.,\n", + " 58., -65., -23., 18., 59., -64., -22., 19., 60., -63.]), 'EncSteps2': array([-65., -64., -63., -62., -61., -60., -59., -58., -57., -56., -55.,\n", + " -54., -53., -52., -51., -50., -49., -48., -47., -46., -45., -44.,\n", + " -43., -42., -41., -40., -39., -38., -37., -36., -35., -34., -33.,\n", + " -32., -31., -30., -29., -28., -27., -26., -25., -24., -23., -22.,\n", + " -21., -20., -19., -18., -17., -16., -15., -14., -13., -12., -11.,\n", + " -10., -9., -8., -7., -6., -5., -4., -3., -2., -1., 0.,\n", + " 1., 2., 3., 4., 5., 6., 7., 8., 9., 10., 11.,\n", + " 12., 13., 14., 15., 16., 17., 18., 19., 20., 21., 22.,\n", + " 23., 24., 25., 26., 27., 28., 29., 30., 31., 32., 33.,\n", + " 34., 35., 36., 37., 38., 39., 40., 41., 42., 43., 44.,\n", + " 45., 46., 47., 48., 49., 50., 51., 52., 53., 54., 55.,\n", + " 56., 57., 58., 59., 60., 61., 62., 63., 64.]), 'EncCentralStep1': 2.0, 'EncCentralStep2': 1.0, 'EncTotalAccel': 1.01219512195122, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.75, 'MinEchoTime': 5.33333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 7.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Sharp', 'DigRes': 20.0, 'DigDw': 0.005, 'DigSw': 200000.0, 'DigNp': 400.0, 'DigShift': 68.0, 'DigGroupDel': 0.34, 'DigDur': 2.0, 'DigEndDelMin': 0.0499999999999998, 'DigEndDelOpt': 0.1588, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '3D', 'Isotropic': 'Isotropic_None', 'Fov': array([20., 14., 13.]), 'FovCm': array([2. , 1.4, 1.3]), 'SpatResol': array([0.1, 0.1, 0.1]), 'Matrix': array([200., 140., 130.]), 'MinMatrix': array([32., 32., 8.]), 'MaxMatrix': array([2048., 2048., 256.]), 'AntiAlias': array([2. , 1.18571429, 1. ]), 'MaxAntiAlias': array([2. , 8. , 4.60872011]), 'SliceThick': 13.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': 0.0, 'NSPacks': 1.0, 'SPackArrNSlices': 1.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'H_F', 'SPackArrReadOffset': -2.1, 'SPackArrPhase1Offset': -0.9, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 0.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': -12.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[-0., -0., 1.],\n", + " [ 1., -0., 0.],\n", + " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([15. , 10.74354067, 10.21913876]), 'FovSatOffset': array([-13.2 , -13.3 , 11.20023923]), 'FovSatSliceVec': array([[0.000000e+00, 1.000000e+00, 6.123234e-17],\n", + " [1.000000e+00, 0.000000e+00, 0.000000e+00],\n", + " [1.000000e+00, 0.000000e+00, 0.000000e+00]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[0.00000000e+00, 5.65507795e-03, 3.46273655e-19],\n", + " [7.89555062e-03, 0.00000000e+00, 0.00000000e+00],\n", + " [8.30071606e-03, 0.00000000e+00, 0.00000000e+00]]), 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 7.0, 'FovSatModuleTime': 9.7, 'FovSatFL': array([-4752. , -6684.94700276, 5918.43337391]), 'SatD0': 0.00015, 'SatD1': 1e-05, 'SatD2': 0.002, 'SatP0': 1000.0, 'SatLp0': 3.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 0.0, 'InFlowSatGap': 0.0, 'InFlowSatSide': 0.0, 'FlowSatPulse': '1 0.001 90 30 100 0 100 LIB_EXCITATION', 'FlowSatDeriveGainMode': 'By_DeriveGains', 'InFlowSatSpoilTime': 2.0, 'InFlowSatSpoilGrad': 20.0, 'InFlowSatModuleTime': 0.0, 'SfD0': 1e-06, 'SfD1': 1e-06, 'SfD2': 1e-06, 'SfP0': 10.0, 'SfLp0': 0.0, 'MotionSupOnOff': 'Off', 'FlipBackOnOff': 'Off', 'EchoTime1': 10.6666666666667, 'EchoTime2': 10.6666666666667, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_percentile': array([ 1. , 99.999]), 'RECO_map_error': 0.00025, 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'END': ''}, 'recons': {'1': {'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([400., 164., 130.]), 'RECO_ft_size': array([400., 166., 130.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([200., 140., 130.]), 'RECO_offset': array([[100.],\n", + " [ 13.],\n", + " [ 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC NO_BC', 'RECO_bc_start': array([300., 123., 98.]), 'RECO_bc_len': array([100., 41., 32.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0., 0.]), 'RECO_qopts': 'CONJ_AND_QNEG NO_QOPTS NO_QOPTS', 'RECO_wdw_mode': 'NO_WDW NO_WDW NO_WDW', 'RECO_lb': array([-0.5, -0.5, -0.5]), 'RECO_sw': array([2.e+05, 1.e+00, 1.e+00]), 'RECO_gb': array([0.5, 0.5, 0.5]), 'RECO_sbs': array([1., 1., 1.]), 'RECO_tm1': array([0.25, 0.25, 0.25]), 'RECO_tm2': array([0.75, 0.75, 0.75]), 'RECO_ft_mode': 'COMPLEX_FT COMPLEX_FT COMPLEX_FT', 'RECO_pc_mode': 'NO_PC NO_PC NO_PC', 'RECO_pc_lin': ['(0, 0)', '(0, 0)', '(0, 0)'], 'RECO_rotate': array([[0. ],\n", + " [0.44578313],\n", + " [0.45384615]]), 'RECO_ppc_mode': 'NO_PPC', 'RECO_ref_image': 0.0, 'RECO_nr_supports': 0.4, 'RECO_sig_threshold': 0.15, 'RECO_ppc_degree': 1.0, 'RECO_ppc_coeffs': array([[[0., 0.],\n", + " [0., 0.],\n", + " [0., 0.]]]), 'RECO_dc_elim': 'No', 'RECO_transposition': 1.0, 'RECO_image_type': 'MAGNITUDE_IMAGE', 'RECO_image_threshold': 0.15, 'RECO_ir_scale': 10.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'RECO_map_percentile': array([ 1. , 99.999]), 'RECO_map_error': 0.00025, 'RECO_globex': 0.0, 'RECO_minima': 49.0, 'RECO_maxima': 32766.0, 'RECO_map_min': -13236953.9213779, 'RECO_map_max': 13236953.9213779, 'RECO_map_offset': 0.0, 'RECO_map_slope': 0.0024754183832556, 'RECO_byte_order': 'littleEndian', 'RECO_time': '11:27:33 21 Jul 2023', 'RECO_abs_time': 1689964053.0, 'RECO_base_image_uid': '2.16.756.5.5.100.380435303.14105.1689969391.16', 'GS_reco_display': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'END': ''}, 'visu_pars': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'VisuVersion': 1.0, 'VisuUid': '2.16.756.5.5.100.380435303.14105.1689969391.16', 'VisuCreator': 'ParaVision', 'VisuCreatorVersion': '5.1', 'VisuCreationDate': '11:27:33 21 Jul 2023', 'VisuCoreFrameCount': 1.0, 'VisuCoreDim': 3.0, 'VisuCoreSize': array([140., 200., 130.]), 'VisuCoreDimDesc': 'spatial spatial spatial', 'VisuCoreExtent': array([14., 20., 13.]), 'VisuCoreFrameThickness': 13.0, 'VisuCoreUnits': ['mm', 'mm', 'mm'], 'VisuCoreOrientation': array([[ 1., 0., 0., 0., 0., -1., 0., 1., 0.]]), 'VisuCorePosition': array([[-6.1, -7. , 7.9]]), 'VisuCoreDataMin': 49.0, 'VisuCoreDataMax': 32766.0, 'VisuCoreDataOffs': 0.0, 'VisuCoreDataSlope': 403.972115083361, 'VisuCoreFrameType': 'MAGNITUDE_IMAGE', 'VisuCoreWordType': '_16BIT_SGN_INT', 'VisuCoreByteOrder': 'littleEndian', 'VisuCoreDiskSliceOrder': 'disk_reverse_slice_order', 'VisuSubjectName': 'DL_AI2', 'VisuSubjectId': 'DL_AI2', 'VisuSubjectBirthDate': '', 'VisuSubjectSex': 'FEMALE', 'VisuSubjectComment': 'DL_AI2', 'VisuStudyUid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'VisuStudyDate': '11:51:04 21 Jul 2023', 'VisuStudyId': '684811_2023_07_21', 'VisuStudyNumber': 2.0, 'VisuSubjectWeight': 5.0, 'VisuStudyReferringPhysician': '', 'VisuStudyDescription': '684811_2023_07_21', 'VisuSeriesNumber': 458753.0, 'VisuSubjectPosition': 'Head_Supine', 'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuAcqSoftwareVersion': '5.1', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:27:33 21 Jul 2023', 'VisuAcqEchoTrainLength': 4.0, 'VisuAcqSequenceName': '(RARE (pvm))', 'VisuAcqNumberOfAverages': 2.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 500.0, 'VisuAcqPhaseEncSteps': 164.0, 'VisuAcqPixelBandwidth': 500.0, 'VisuAcqFlipAngle': 180.0, 'VisuAcqSize': array([164., 400., 130.]), 'VisuAcqImageSizeAccellerated': 'Yes', 'VisuAcqImagePhaseEncDir': 'row_slice_dir', 'VisuAcqEchoTime': 10.6666666666667, 'VisuAcquisitionProtocol': '07c_RARE_8_3D_T2w_cor', 'VisuAcqScanTime': 5330000.0, 'END': ''}}}}}\n", "['1', '2', '3', '4', '5', '6', '7']\n", "['1']\n", "{'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([400., 164., 130.]), 'RECO_ft_size': array([400., 166., 130.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([200., 140., 130.]), 'RECO_offset': array([[100.],\n", @@ -52,38 +1060,162 @@ "print(metadata.subject_data)" ] }, + { + "cell_type": "code", + "execution_count": 24, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "dict_keys(['acqp', 'method', 'recons'])\n", + "dict_keys(['TITLE', 'JCAMPDX', 'DATATYPE', 'ORIGIN', 'OWNER', 'Method', 'EchoTime', 'EffectiveTE', 'RareFactor', 'RepetitionTime', 'NAverages', 'NRepetitions', 'NEchoImages', 'ScanTimeStr', 'RfcFlipAngle', 'DeriveGains', 'SliceBandWidthScale', 'ExcPulseEnum', 'ExcPulse', 'RefPulseEnum', 'RefPulse', 'GradCalConst', 'Nucleus1Enum', 'Nucleus1', 'RefAttMod1', 'RefAttCh1', 'RefAttStat1', 'Nucleus2Enum', 'Nucleus2', 'Nucleus3Enum', 'Nucleus4Enum', 'Nucleus5Enum', 'Nucleus6Enum', 'Nucleus7Enum', 'Nucleus8Enum', 'EncUseMultiRec', 'EncActReceivers', 'EncZfRead', 'EncPpiAccel1', 'EncPpiRefLines1', 'EncPftAccel1', 'EncZfAccel1', 'EncZfAccel2', 'EncOrder1', 'EncOrder2', 'EncStart1', 'EncStart2', 'EncMatrix', 'EncSteps1', 'EncSteps2', 'EncCentralStep1', 'EncCentralStep2', 'EncTotalAccel', 'EncNReceivers', 'EncAvailReceivers', 'EncChanScaling', 'OperationMode', 'EffSWh', 'ReadDephaseTime', '2dPhaseGradientTime', 'MinEchoTime', 'SliceSpoilerDuration', 'SliceSpoilerStrength', 'RepetitionSpoilerDuration', 'RepetitionSpoilerStrength', 'DigAutSet', 'DigQuad', 'DigFilter', 'DigRes', 'DigDw', 'DigSw', 'DigNp', 'DigShift', 'DigGroupDel', 'DigDur', 'DigEndDelMin', 'DigEndDelOpt', 'GeoMode', 'SpatDimEnum', 'Isotropic', 'Fov', 'FovCm', 'SpatResol', 'Matrix', 'MinMatrix', 'MaxMatrix', 'AntiAlias', 'MaxAntiAlias', 'SliceThick', 'ObjOrderScheme', 'ObjOrderList', 'NSPacks', 'SPackArrNSlices', 'MajSliceOri', 'SPackArrSliceOrient', 'SPackArrReadOrient', 'SPackArrReadOffset', 'SPackArrPhase1Offset', 'SPackArrPhase2Offset', 'SPackArrSliceOffset', 'SPackArrSliceGapMode', 'SPackArrSliceGap', 'SPackArrSliceDistance', 'SPackArrGradOrient', 'NDummyScans', 'TriggerModule', 'EvolutionOnOff', 'SelIrOnOff', 'BlBloodOnOff', 'FatSupOnOff', 'FatSupprPulseEnum', 'FatSupprPulse', 'FatSupDeriveGainMode', 'FatSupBandWidth', 'FatSupSpoilTime', 'FatSupSpoilGrad', 'FatSupModuleTime', 'FatSupFL', 'FsD0', 'FsD1', 'FsD2', 'FsP0', 'MagTransOnOff', 'FovSatOnOff', 'FovSatNSlices', 'FovSatSliceOrient', 'FovSatThick', 'FovSatOffset', 'FovSatSliceVec', 'SatSlicesPulseEnum', 'SatSlicesPulse', 'SatSlicesDeriveGainMode', 'FovSatGrad', 'FovSatSpoilTime', 'FovSatSpoilGrad', 'FovSatModuleTime', 'FovSatFL', 'SatD0', 'SatD1', 'SatD2', 'SatP0', 'SatLp0', 'InFlowSatOnOff', 'InFlowSatNSlices', 'InFlowSatThick', 'InFlowSatGap', 'InFlowSatSide', 'FlowSatPulse', 'FlowSatDeriveGainMode', 'InFlowSatSpoilTime', 'InFlowSatSpoilGrad', 'InFlowSatModuleTime', 'SfD0', 'SfD1', 'SfD2', 'SfP0', 'SfLp0', 'MotionSupOnOff', 'FlipBackOnOff', 'EchoTime1', 'EchoTime2', 'RECO_wordtype', 'RECO_map_mode', 'RECO_map_percentile', 'RECO_map_error', 'RECO_map_range', 'END'])\n", + "RARE\n", + "5.33333333333333\n", + "10.6666666666667\n", + "4.0\n", + "500.0\n" + ] + } + ], + "source": [ + "# Checking Method Fields\n", + "\n", + "print(metadata.scan_data['7'].keys())\n", + "print(self.cur_method.keys())\n", + "print(self.cur_method['Method'])\n", + "print(self.cur_method['EchoTime'])\n", + "print(self.cur_method['EffectiveTE'])\n", + "print(self.cur_method['RareFactor'])\n", + "print(self.cur_method['RepetitionTime'])\n", + "print(self.cur_method['SpatResol'])" + ] + }, + { + "cell_type": "code", + "execution_count": 37, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "{'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'VisuVersion': 1.0, 'VisuUid': '2.16.756.5.5.100.380435303.14105.1689969391.16', 'VisuCreator': 'ParaVision', 'VisuCreatorVersion': '5.1', 'VisuCreationDate': '11:27:33 21 Jul 2023', 'VisuCoreFrameCount': 1.0, 'VisuCoreDim': 3.0, 'VisuCoreSize': array([140., 200., 130.]), 'VisuCoreDimDesc': 'spatial spatial spatial', 'VisuCoreExtent': array([14., 20., 13.]), 'VisuCoreFrameThickness': 13.0, 'VisuCoreUnits': ['mm', 'mm', 'mm'], 'VisuCoreOrientation': array([[ 1., 0., 0., 0., 0., -1., 0., 1., 0.]]), 'VisuCorePosition': array([[-6.1, -7. , 7.9]]), 'VisuCoreDataMin': 49.0, 'VisuCoreDataMax': 32766.0, 'VisuCoreDataOffs': 0.0, 'VisuCoreDataSlope': 403.972115083361, 'VisuCoreFrameType': 'MAGNITUDE_IMAGE', 'VisuCoreWordType': '_16BIT_SGN_INT', 'VisuCoreByteOrder': 'littleEndian', 'VisuCoreDiskSliceOrder': 'disk_reverse_slice_order', 'VisuSubjectName': 'DL_AI2', 'VisuSubjectId': 'DL_AI2', 'VisuSubjectBirthDate': '', 'VisuSubjectSex': 'FEMALE', 'VisuSubjectComment': 'DL_AI2', 'VisuStudyUid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'VisuStudyDate': '11:51:04 21 Jul 2023', 'VisuStudyId': '684811_2023_07_21', 'VisuStudyNumber': 2.0, 'VisuSubjectWeight': 5.0, 'VisuStudyReferringPhysician': '', 'VisuStudyDescription': '684811_2023_07_21', 'VisuSeriesNumber': 458753.0, 'VisuSubjectPosition': 'Head_Supine', 'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuAcqSoftwareVersion': '5.1', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:27:33 21 Jul 2023', 'VisuAcqEchoTrainLength': 4.0, 'VisuAcqSequenceName': '(RARE (pvm))', 'VisuAcqNumberOfAverages': 2.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 500.0, 'VisuAcqPhaseEncSteps': 164.0, 'VisuAcqPixelBandwidth': 500.0, 'VisuAcqFlipAngle': 180.0, 'VisuAcqSize': array([164., 400., 130.]), 'VisuAcqImageSizeAccellerated': 'Yes', 'VisuAcqImagePhaseEncDir': 'row_slice_dir', 'VisuAcqEchoTime': 10.6666666666667, 'VisuAcquisitionProtocol': '07c_RARE_8_3D_T2w_cor', 'VisuAcqScanTime': 5330000.0, 'END': ''}\n", + "[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + "[[-6.1 -7. 7.9]]\n" + ] + } + ], + "source": [ + "print(metadata.scan_data['7']['recons']['1']['visu_pars'])\n", + "cur_visu_pars = metadata.scan_data['7']['recons']['1']['visu_pars']\n", + "print(*cur_visu_pars['VisuCoreOrientation'])\n", + "print(cur_visu_pars['VisuCorePosition'])\n", + "\n", + "scan7 = metadata.read_scan('7')\n", + "\n", + "\n", + "# print(scan7['recons']['1']['visu_pars'].keys())" + ] + }, + { + "cell_type": "code", + "execution_count": 6, + "metadata": {}, + "outputs": [ + { + "ename": "SyntaxError", + "evalue": "invalid syntax (721329819.py, line 24)", + "output_type": "error", + "traceback": [ + "\u001b[1;36m Cell \u001b[1;32mIn[6], line 24\u001b[1;36m\u001b[0m\n\u001b[1;33m scan_index=,\u001b[0m\n\u001b[1;37m ^\u001b[0m\n\u001b[1;31mSyntaxError\u001b[0m\u001b[1;31m:\u001b[0m invalid syntax\n" + ] + } + ], + "source": [ + "from aind_data_schema.core.mri_session import MRIScan, MriScanSequence, ScanType, SubjectPosition\n", + "from decimal import Decimal\n", + "from aind_data_schema.models.units import MassUnit, TimeUnit\n", + "\n", + "# method\n", + " ##$Method=RARE\n", + " ##$PVM_RareFactor=8,\n", + " ##$PVM_EchoTime=0.01,\n", + " ##$EffectiveTE=(1)\n", + " # 10.6666667\n", + " ##$PVM_RepetitionTime=500,\n", + " ##$PVM_SpatResol=( 3 )\n", + " # 0.1 0.1 0.1\n", + "\n", + "# visu_pars\n", + " ##$VisuCoreOrientation=( 1, 9 )\n", + " # 1 0 0 0 0 -1 0 1 0\n", + " ##$VisuCorePosition=( 1, 3 )\n", + " # -6.1 -7 7.9\n", + "\n", + "# subject\n", + " ##$SUBJECT_position=SUBJ_POS_Supine" + ] + }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ - "from bruker2nifti._utils import bruker_read_files" + "from bruker2nifti._metadata import BrukerMetadata\n", + "from pathlib import Path\n", + "from aind_data_schema.models.coordinates import Rotation3dTransform, Scale3dTransform, Translation3dTransform\n", + "from aind_data_schema.core.mri_session import MRIScan, MriScanSequence, ScanType, SubjectPosition\n", + "from decimal import Decimal\n", + "from aind_data_schema.models.units import MassUnit, TimeUnit\n", + "\n", + "class MRILoader:\n", + " def __init__(self, data_path):\n", + " self.metadata = BrukerMetadata(path)\n", + " self.metadata.parse_scans()\n", + " self.metadata.parse_subject()\n", + "\n", + " def make_model_from_scan(self, scan_index: str, scan_type, primary_scan: bool) -> MRIScan:\n", + " self.cur_visu_pars = self.metadata.scan_data[scan_index]['recons']['1']['visu_pars']\n", + " self.cur_method = self.metadata.scan_data[scan_index]['method']\n", + "\n", + " return MRIScan(\n", + " scan_index=scan_index,\n", + " scan_type=ScanType(scan_type), # set by scientists\n", + " primary_scan=primary_scan, # set by scientists\n", + " scan_sequence_type=MriScanSequence(self.cur_method['Method']), # method ##$Method=RARE,\n", + " rare_factor=self.cur_method['RareFactor'], # method ##$PVM_RareFactor=8,\n", + " echo_time=self.cur_method['EchoTime'], # method ##$PVM_EchoTime=0.01,\n", + " effective_echo_time=Decimal(self.cur_method['EffectiveTE']), # method ##$EffectiveTE=(1)\n", + " echo_time_unit=TimeUnit(), # what do we want here?\n", + " repetition_time=self.cur_method['RepetitionTime'], # method ##$PVM_RepetitionTime=500,\n", + " repetition_time_unit=TimeUnit(), # ditto\n", + " vc_orientation=Rotation3dTransform(rotation=self.cur_visu_pars['VisuCoreOrientation']),# visu_pars ##$VisuCoreOrientation=( 1, 9 )\n", + " vc_position=Translation3dTransform(translation=self.cur_visu_pars['VisuCorePosition']), # visu_pars ##$VisuCorePosition=( 1, 3 )\n", + " subject_position=SubjectPosition(self.metadata.subject_data[\"SUBJECT_position\"]), # subject ##$SUBJECT_position=SUBJ_POS_Supine,\n", + " vozel_sizes=Scale3dTransform(self.cur_method['SpatResol']), # method ##$PVM_SpatResol=( 3 )\n", + " processing_steps=[],\n", + " additional_scan_parameters={},\n", + " notes=\"\", # Where should we pull these?\n", + " ) " ] }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] + }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ - "from aind_data_schema.imaging.mri_session import MRIScan\n", - "\n", - "scan = MRIScan(\n", - " scan_type=,\n", - " primary_scan=,\n", - " scan_sequence_type=,\n", - " axes=,\n", - " voxel_sizes=,\n", - " processing_steps=,\n", - " echo_time=,\n", - " effective_echo_time=,\n", - " echo_time_unit=,\n", - " repetition_time=,\n", - " repetition_time_unit=,\n", - " additional_scan_parameters=,\n", - " notes=,\n", - ")" + "loader = MRILoader(path)" ] } ], From 7fcf2090769d15d68370c7a7067db88bf883ffb1 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Mon, 19 Feb 2024 15:16:37 -0600 Subject: [PATCH 04/43] working model --- scripts/MRI_ingest/scratch.ipynb | 1097 ++---------------------------- 1 file changed, 47 insertions(+), 1050 deletions(-) diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb index 6a836233..2c489e14 100644 --- a/scripts/MRI_ingest/scratch.ipynb +++ b/scripts/MRI_ingest/scratch.ipynb @@ -2,7 +2,7 @@ "cells": [ { "cell_type": "code", - "execution_count": 2, + "execution_count": 1, "metadata": {}, "outputs": [], "source": [ @@ -13,1020 +13,13 @@ }, { "cell_type": "code", - "execution_count": 12, + "execution_count": 2, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "{'1': {'acqp': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'PULPROG': 'FLASH.ppg', 'GRDPROG': '', 'ACQ_experiment_mode': 'SingleExperiment', 'ACQ_user_filter': 'No', 'ACQ_DS_enabled': 'Yes', 'ACQ_switch_pll_enabled': 'No', 'ACQ_preload': 0.0, 'ACQ_dim': 2.0, 'ACQ_dim_desc': 'Spatial Spatial', 'ACQ_size': array([256., 128.]), 'ACQ_ns_list_size': 1.0, 'ACQ_ns': 1.0, 'ACQ_phase_factor': 1.0, 'ACQ_scan_size': 'One_scan', 'NI': 3.0, 'NA': 1.0, 'NAE': 1.0, 'NR': 1.0, 'DS': 10.0, 'D': array([2.09388616e-02, 0.00000000e+00, 1.00000000e-05, 1.50000000e-04,\n", - " 1.00000000e-04, 0.00000000e+00, 1.85000000e-03, 0.00000000e+00,\n", - " 1.00000000e-05, 0.00000000e+00, 9.00000000e-04, 9.00000000e-04,\n", - " 2.50000000e-04, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 1.00000000e-05, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00]), 'P': array([1000., 5., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 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'ACQ_grad_matrix': array([[[ 1., -0., -0.],\n", - " [ 0., 1., 0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[ 0., 0., 1.],\n", - " [ 1., 0., 0.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 0., 0., 1.],\n", - " [ 0., 1., 0.],\n", - " [ 1., 0., 0.]]]), 'NSLICES': 3.0, 'ACQ_rare_factor': 1.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1.]), 'ACQ_spatial_size_1': 128.0, 'ACQ_spatial_phase_1': array([-1. , -0.984375, -0.96875 , -0.953125, -0.9375 , -0.921875,\n", - " -0.90625 , -0.890625, -0.875 , -0.859375, -0.84375 , -0.828125,\n", - " -0.8125 , -0.796875, -0.78125 , -0.765625, -0.75 , -0.734375,\n", - " -0.71875 , -0.703125, -0.6875 , -0.671875, -0.65625 , -0.640625,\n", - " -0.625 , -0.609375, -0.59375 , -0.578125, -0.5625 , -0.546875,\n", - " -0.53125 , -0.515625, -0.5 , -0.484375, -0.46875 , -0.453125,\n", - " -0.4375 , -0.421875, -0.40625 , -0.390625, -0.375 , -0.359375,\n", - " -0.34375 , -0.328125, -0.3125 , -0.296875, -0.28125 , -0.265625,\n", - " -0.25 , -0.234375, -0.21875 , -0.203125, -0.1875 , -0.171875,\n", - " -0.15625 , -0.140625, -0.125 , -0.109375, -0.09375 , -0.078125,\n", - " -0.0625 , -0.046875, -0.03125 , -0.015625, 0. , 0.015625,\n", - " 0.03125 , 0.046875, 0.0625 , 0.078125, 0.09375 , 0.109375,\n", - " 0.125 , 0.140625, 0.15625 , 0.171875, 0.1875 , 0.203125,\n", - " 0.21875 , 0.234375, 0.25 , 0.265625, 0.28125 , 0.296875,\n", - " 0.3125 , 0.328125, 0.34375 , 0.359375, 0.375 , 0.390625,\n", - " 0.40625 , 0.421875, 0.4375 , 0.453125, 0.46875 , 0.484375,\n", - " 0.5 , 0.515625, 0.53125 , 0.546875, 0.5625 , 0.578125,\n", - " 0.59375 , 0.609375, 0.625 , 0.640625, 0.65625 , 0.671875,\n", - " 0.6875 , 0.703125, 0.71875 , 0.734375, 0.75 , 0.765625,\n", - " 0.78125 , 0.796875, 0.8125 , 0.828125, 0.84375 , 0.859375,\n", - " 0.875 , 0.890625, 0.90625 , 0.921875, 0.9375 , 0.953125,\n", - " 0.96875 , 0.984375]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'FLASH', 'EchoTime': 3.42, 'RepetitionTime': 100.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'ScanTimeStr': '0h0m12s800ms', 'ExcPulseAngle': 30.0, 'DeriveGains': 'Yes', 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 30 17.4418065501076 100 0 100 LIB_EXCITATION', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncMatrix': array([128., 128.]), 'EncSteps1': array([-64., -63., -62., -61., -60., -59., -58., -57., -56., -55., -54.,\n", - " -53., -52., -51., -50., -49., -48., -47., -46., -45., -44., -43.,\n", - " -42., -41., -40., -39., -38., -37., -36., -35., -34., -33., -32.,\n", - " -31., -30., -29., -28., -27., -26., -25., -24., -23., -22., -21.,\n", - " -20., -19., -18., -17., -16., -15., -14., -13., -12., -11., -10.,\n", - " -9., -8., -7., -6., -5., -4., -3., -2., -1., 0., 1.,\n", - " 2., 3., 4., 5., 6., 7., 8., 9., 10., 11., 12.,\n", - " 13., 14., 15., 16., 17., 18., 19., 20., 21., 22., 23.,\n", - " 24., 25., 26., 27., 28., 29., 30., 31., 32., 33., 34.,\n", - " 35., 36., 37., 38., 39., 40., 41., 42., 43., 44., 45.,\n", - " 46., 47., 48., 49., 50., 51., 52., 53., 54., 55., 56.,\n", - " 57., 58., 59., 60., 61., 62., 63.]), 'EncCentralStep1': 1.0, 'EncTotalAccel': 1.0, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'EchoPosition': 50.0, 'EchoTimeMode': 'Long_TE', 'ReadDephaseTime': 1.0, 'ExSliceRephaseTime': 1.0, 'ReadSpoilerDuration': 1.15, 'ReadSpoilerStrength': 20.0, 'SliceSpoilerDuration': 2.0, 'SliceSpoilerStrength': 20.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Medium', 'DigRes': 20.0, 'DigDw': 0.01, 'DigSw': 100000.0, 'DigNp': 128.0, 'DigShift': 36.0, 'DigGroupDel': 0.36, 'DigDur': 1.28, 'DigEndDelMin': 0.05, 'DigEndDelOpt': 0.0824032403240322, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '2D', 'Isotropic': 'Isotropic_Fov', 'Fov': array([30., 30.]), 'FovCm': array([3., 3.]), 'SpatResol': array([0.234375, 0.234375]), 'Matrix': array([128., 128.]), 'MinMatrix': array([32., 32.]), 'MaxMatrix': array([2048., 2048.]), 'AntiAlias': array([1., 1.]), 'MaxAntiAlias': array([2., 8.]), 'SliceThick': 2.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': array([0., 2., 1.]), 'NSPacks': 3.0, 'SPackArrNSlices': array([1., 1., 1.]), 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'axial sagittal coronal', 'SPackArrReadOrient': 'L_R H_F H_F', 'SPackArrReadOffset': array([0., 0., 0.]), 'SPackArrPhase1Offset': array([0., 0., 0.]), 'SPackArrPhase2Offset': array([0., 0., 0.]), 'SPackArrSliceOffset': array([0., 0., 0.]), 'SPackArrSliceGapMode': 'non_contiguous non_contiguous non_contiguous', 'SPackArrSliceGap': array([3., 0., 0.]), 'SPackArrSliceDistance': array([5., 2., 2.]), 'SPackArrGradOrient': array([[[-1., 0., 0.],\n", - " [ 0., 1., 0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[ 0., 0., 1.],\n", - " [ 0., 1., 0.],\n", - " [ 1., 0., 0.]],\n", - "\n", - " [[ 0., 0., 1.],\n", - " [ 1., 0., 0.],\n", - " [ 0., 1., 0.]]]), 'NDummyScans': 10.0, 'MovieOnOff': 'Off', 'NMovieFrames': 1.0, 'TimeForMovieFrames': 100.0, 'EvolutionOnOff': 'Off', 'TriggerModule': 'Off', 'TaggingOnOff': 'Off', 'TaggingPulse': '0.2 0.001 90 30 100 0 100 LIB_EXCITATION bp.exc', 'TaggingDeriveGainMode': 'By_DeriveGains', 'TaggingMode': 'SPAMM', 'TaggingDir': 'Tagging_grid', 'TaggingDistance': 1.0, 'TaggingMinDistance': 0.001, 'TaggingThick': 0.2, 'TaggingOffset1': 0.0, 'TaggingOffset2': 0.0, 'TaggingAngle': 0.0, 'TaggingDelay': 0.01, 'TaggingModuleTime': 0.0, 'TaggingPulseNumber': 1.0, 'TaggingPulseElement': 0.04, 'TaggingGradientStrength': 5.0, 'TaggingSpoilGrad': 50.0, 'TaggingSpoilDuration': 2.0, 'TaggingGridDelay': 0.01, 'TaggingD0': 1e-06, 'TaggingD1': 1e-06, 'TaggingD2': 1e-06, 'TaggingD3': 1e-06, 'TaggingD4': 1e-06, 'TaggingD5': 1e-06, 'TaggingP0': 10.0, 'TaggingLp0': 0.0, 'TaggingGradAmp1': 0.0, 'TaggingGradAmp2': 0.0, 'TaggingGradAmp3': 0.0, 'TaggingGradAmp4': 0.0, 'TaggingSpoiler': 0.0, 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30447174135979, 2100.46711870033, 90,17.4940279796479, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.46711870033, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50447174135979, 'FatSupFL': -2099.3353022758, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.47174135979, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'Off', 'FovSatNSlices': 1.0, 'FovSatSliceOrient': 'sagittal', 'FovSatThick': 0.089290704407753, 'FovSatOffset': 0.0, 'FovSatSliceVec': array([[1., 0., 0.]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 20.0, 'FovSatModuleTime': 0.0, 'FovSatFL': 0.0, 'SatD0': 1e-06, 'SatD1': 1e-06, 'SatD2': 1e-06, 'SatP0': 10.0, 'SatLp0': 0.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 0.0, 'InFlowSatGap': 0.0, 'InFlowSatSide': 0.0, 'FlowSatPulse': '1 0.001 90 30 100 0 100 LIB_EXCITATION', 'FlowSatDeriveGainMode': 'By_DeriveGains', 'InFlowSatSpoilTime': 2.0, 'InFlowSatSpoilGrad': 20.0, 'InFlowSatModuleTime': 0.0, 'SfD0': 1e-06, 'SfD1': 1e-06, 'SfD2': 1e-06, 'SfP0': 10.0, 'SfLp0': 0.0, 'MotionSupOnOff': 'Off', 'EchoTime1': 3.42, 'NEchoImages': 1.0, 'ppgFlag1': 'Yes', 'RecoMethMode': 'Default', 'WeightingMode': 'positive_mask', 'MaskWeighting': 4.0, 'GaussBroadening': 1.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'END': ''}, 'recons': {'1': {'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([128., 128.]), 'RECO_ft_size': array([128., 128.]), 'RECO_fov': array([3., 3.]), 'RECO_size': array([128., 128.]), 'RECO_offset': array([[0., 0., 0.],\n", - " [0., 0., 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC', 'RECO_bc_start': array([96., 96.]), 'RECO_bc_len': array([32., 32.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0.]), 'RECO_qopts': 'CONJ_AND_QNEG NO_QOPTS', 'RECO_wdw_mode': 'NO_WDW NO_WDW', 'RECO_lb': array([-0.5, -0.5]), 'RECO_sw': array([1.e+05, 1.e+00]), 'RECO_gb': array([0.5, 0.5]), 'RECO_sbs': array([1., 1.]), 'RECO_tm1': array([0.25, 0.25]), 'RECO_tm2': array([0.75, 0.75]), 'RECO_ft_mode': 'COMPLEX_FFT COMPLEX_FFT', 'RECO_pc_mode': 'NO_PC NO_PC', 'RECO_pc_lin': ['(0, 0)', '(0, 0)'], 'RECO_rotate': array([[0. , 0. , 0. ],\n", - " [0.5, 0.5, 0.5]]), 'RECO_ppc_mode': 'NO_PPC', 'RECO_ref_image': 0.0, 'RECO_nr_supports': 0.4, 'RECO_sig_threshold': 0.15, 'RECO_ppc_degree': 1.0, 'RECO_ppc_coeffs': array([[[0., 0.],\n", - " [0., 0.]],\n", - "\n", - " [[0., 0.],\n", - " [0., 0.]],\n", - "\n", - " [[0., 0.],\n", - " [0., 0.]]]), 'RECO_dc_elim': 'No', 'RECO_transposition': array([0., 1., 1.]), 'RECO_image_type': 'MAGNITUDE_IMAGE', 'RECO_image_threshold': 0.15, 'RECO_ir_scale': 10.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_globex': array([0., 0., 0.]), 'RECO_minima': array([4., 7., 7.]), 'RECO_maxima': array([32766., 32766., 26979.]), 'RECO_map_min': array([-1381569.375, -1381569.375, -1381569.375]), 'RECO_map_max': array([1381569.375, 1381569.375, 1381569.375]), 'RECO_map_offset': array([0., 0., 0.]), 'RECO_map_slope': array([0.02371723, 0.02371723, 0.02371723]), 'RECO_byte_order': 'littleEndian', 'RECO_time': '11:07:59 21 Jul 2023', 'RECO_abs_time': 1689962879.0, 'RECO_base_image_uid': '2.16.756.5.5.100.380435303.14105.1689962894.10', 'GS_reco_display': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'END': ''}, 'visu_pars': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'VisuVersion': 1.0, 'VisuUid': '2.16.756.5.5.100.380435303.14105.1689962894.10', 'VisuCreator': 'ParaVision', 'VisuCreatorVersion': '5.1', 'VisuCreationDate': '11:07:59 21 Jul 2023', 'VisuCoreFrameCount': 3.0, 'VisuCoreDim': 2.0, 'VisuCoreSize': 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'VisuStudyUid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'VisuStudyDate': '11:51:04 21 Jul 2023', 'VisuStudyId': '684811_2023_07_21', 'VisuStudyNumber': 2.0, 'VisuSubjectWeight': 5.0, 'VisuStudyReferringPhysician': '', 'VisuStudyDescription': '684811_2023_07_21', 'VisuSeriesNumber': 65537.0, 'VisuSubjectPosition': 'Head_Supine', 'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:07:59 21 Jul 2023', 'VisuAcqEchoTrainLength': 1.0, 'VisuAcqSequenceName': '(FLASH (pvm))', 'VisuAcqNumberOfAverages': 1.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 100.0, 'VisuAcqPhaseEncSteps': 128.0, 'VisuAcqPixelBandwidth': 781.25, 'VisuAcqFlipAngle': 30.0, 'VisuAcqSize': array([128., 128.]), 'VisuAcqImageSizeAccellerated': 'No', 'VisuAcqImagePhaseEncDir': 'col_dir row_dir row_dir', 'VisuAcqEchoTime': 3.42, 'VisuAcquisitionProtocol': '(00_A_TRIPILOT_GE_bas (FOV 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0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00]), 'P': array([1000. , 633.33333333, 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ]), 'PL': array([ 0., 120., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'TPQQ': ['(, 7.89938145571436, 0)', '(, -2.08857153290193, 0)', '(< >, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(< >, 30, 0)'], 'DPQQ': ['(<>, 50, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(, 17.4951879761457, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)'], 'SW_h': 100000.0, 'SW': 166.809369234271, 'FW': 0.0, 'RG': 101.0, 'AQ_mod': 'qdig', 'DR': 20.0, 'PAPS': 'QP', 'PH_ref': 0.0, 'ACQ_BF_enable': 'Yes', 'BF1': 599.486710243222, 'SFO1': 599.486710243222, 'O1': 0.0, 'ACQ_O1_list_size': 15.0, 'ACQ_O1_list': array([-33048., -23868., -14688., -5508., 3672., 12852., 22032.,\n", - " 31212., -28458., -19278., -10098., -918., 8262., 17442.,\n", - " 26622.]), 'ACQ_O1B_list_size': 15.0, 'ACQ_O1B_list': array([-6000., -6000., -6000., -6000., -6000., -6000., -6000., -6000.,\n", - " -6000., -6000., -6000., -6000., -6000., -6000., -6000.]), 'BF2': 599.6429484, 'SFO2': 599.6429484, 'O2': 0.0, 'ACQ_O2_list_size': 1.0, 'ACQ_O2_list': 0.0, 'BF3': 599.6429484, 'SFO3': 599.6429484, 'O3': 0.0, 'ACQ_O3_list_size': 1.0, 'ACQ_O3_list': 0.0, 'BF4': 599.6429484, 'SFO4': 599.6429484, 'O4': 0.0, 'BF5': 599.6429484, 'SFO5': 599.6429484, 'O5': 0.0, 'BF6': 599.6429484, 'SFO6': 599.6429484, 'O6': 0.0, 'BF7': 599.6429484, 'SFO7': 599.6429484, 'O7': 0.0, 'BF8': 599.6429484, 'SFO8': 599.6429484, 'O8': 0.0, 'NUC1': '1H', 'NUC2': 'off', 'NUC3': 'off', 'NUC4': 'off', 'NUC5': 'off', 'NUC6': 'off', 'NUC7': 'off', 'NUC8': 'off', 'NUCLEUS': '1H', 'ACQ_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'ACQ_coils': ['(, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<31P generic>, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)'], 'ACQ_coil_elements': ['(0, 3, -1, 1, 0, 0, 0, 0, 0, 0, <1H>, 0, noPin, preamp_probe, 0, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)', '(1, 3, -1, 1, 0, 0, 0, 0, 0, 0, <31P >, 0, noPin, preamp_probe, 3, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)'], 'ACQ_operation_mode': '[1H] TX/RX Volume', 'ACQ_Routing': 'RouteDefinedByCoil', 'L': array([ 0., 16., 16., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0.]), 'ACQ_vd_list_size': 1.0, 'ACQ_vd_list': 1e-06, 'ACQ_vp_list_size': 1.0, 'ACQ_vp_list': 1e-06, 'ACQ_status': 'S040', 'ACQ_Routing_base': '1H', 'ACQ_protocol_location': 'DL_AI2', 'ACQ_protocol_name': '01a_Positioning', 'ACQ_scan_name': '01a_Positioning', 'ACQ_method': 'RARE', 'ACQ_completed': 'Yes', 'ACQ_pipe_status': 'Wrapup', 'ACQ_scans_completed': 0.0, 'ACQ_nr_completed': 1.0, 'ACQ_total_completed': 1920.0, 'ACQ_word_size': '_32_BIT', 'NECHOES': 8.0, 'ACQ_n_echo_images': 1.0, 'ACQ_n_movie_frames': 1.0, 'ACQ_echo_descr': '', 'ACQ_movie_descr': '', 'ACQ_fov': array([2.5, 2.5]), 'ACQ_read_ext': 1.0, 'ACQ_slice_angle': 0.0, 'ACQ_slice_orient': 'Arbitrary_Oblique', 'ACQ_patient_pos': 'Head_Supine', 'ACQ_read_offset': array([-1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5, -1.5,\n", - " -1.5, -1.5, -1.5, -1.5]), 'ACQ_phase1_offset': array([-1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4, -1.4,\n", - " -1.4, -1.4, -1.4, -1.4]), 'ACQ_phase2_offset': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'ACQ_slice_sepn': 1.0, 'ACQ_slice_sepn_mode': 'Contiguous', 'ACQ_slice_thick': 1.0, 'ACQ_slice_offset': array([-7.2, -6.2, -5.2, -4.2, -3.2, -2.2, -1.2, -0.2, 0.8, 1.8, 2.8,\n", - " 3.8, 4.8, 5.8, 6.8]), 'ACQ_obj_order': array([ 0., 2., 4., 6., 8., 10., 12., 14., 1., 3., 5., 7., 9.,\n", - " 11., 13.]), 'ACQ_flip_angle': 180.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 5.49333333333333, 'ACQ_inter_echo_time': 5.49333333333333, 'ACQ_recov_time': 1958.8, 'ACQ_repetition_time': 2000.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:09:45 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689962985.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 68.003173828125, 'FRQLO3': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([ 7.89938146, -2.08857153, 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 50. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 30. , 17.49518798, 30. , 30. , 30. ,\n", - " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': 'hermite.rfc', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_standard', 'DECIM': 200.0, 'DSPFVS': 20.0, 'ACQ_scan_shift': -136.0, 'DEOSC': 3125.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", - " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", - " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 7.21022438, 7.21022438, 7.21022438],\n", - " [ -6.10095909, -6.10095909, -6.10095909],\n", - " [ 7.21022438, 7.21022438, 7.21022438],\n", - " [ 15. , 15. , 15. ],\n", - " [ 17.44857383, 17.44857383, 17.44857383],\n", - " [ 6.28341994, 6.28341994, 6.28341994],\n", - " [ 8.93641947, 8.93641947, 8.93641947],\n", - " [-57. , -57. , -57. ],\n", - " [ -8.93641947, -8.93641947, -8.93641947],\n", - " [ 57. , 57. , 57. ],\n", - " [ 15. , 15. , 15. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]],\n", - "\n", - " [[-0., 1., 0.],\n", - " [ 1., 0., -0.],\n", - " [ 0., 0., 1.]]]), 'NSLICES': 15.0, 'ACQ_rare_factor': 8.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1.]), 'ACQ_spatial_size_1': 128.0, 'ACQ_spatial_phase_1': array([ 0. , 0.125 , 0.25 , 0.375 , 0.5 , 0.625 ,\n", - " 0.75 , 0.875 , -0.015625, -0.140625, -0.265625, -0.390625,\n", - " -0.515625, -0.640625, -0.765625, -0.890625, 0.015625, 0.140625,\n", - " 0.265625, 0.390625, 0.515625, 0.640625, 0.765625, 0.890625,\n", - " -0.03125 , -0.15625 , -0.28125 , -0.40625 , -0.53125 , -0.65625 ,\n", - " -0.78125 , -0.90625 , 0.03125 , 0.15625 , 0.28125 , 0.40625 ,\n", - " 0.53125 , 0.65625 , 0.78125 , 0.90625 , -0.046875, -0.171875,\n", - " -0.296875, -0.421875, -0.546875, -0.671875, -0.796875, -0.921875,\n", - " 0.046875, 0.171875, 0.296875, 0.421875, 0.546875, 0.671875,\n", - " 0.796875, 0.921875, -0.0625 , -0.1875 , -0.3125 , -0.4375 ,\n", - " -0.5625 , -0.6875 , -0.8125 , -0.9375 , 0.0625 , 0.1875 ,\n", - " 0.3125 , 0.4375 , 0.5625 , 0.6875 , 0.8125 , 0.9375 ,\n", - " -0.078125, -0.203125, -0.328125, -0.453125, -0.578125, -0.703125,\n", - " -0.828125, -0.953125, 0.078125, 0.203125, 0.328125, 0.453125,\n", - " 0.578125, 0.703125, 0.828125, 0.953125, -0.09375 , -0.21875 ,\n", - " -0.34375 , -0.46875 , -0.59375 , -0.71875 , -0.84375 , -0.96875 ,\n", - " 0.09375 , 0.21875 , 0.34375 , 0.46875 , 0.59375 , 0.71875 ,\n", - " 0.84375 , 0.96875 , -0.109375, -0.234375, -0.359375, -0.484375,\n", - " -0.609375, -0.734375, -0.859375, -0.984375, 0.109375, 0.234375,\n", - " 0.359375, 0.484375, 0.609375, 0.734375, 0.859375, 0.984375,\n", - " -0.125 , -0.25 , -0.375 , -0.5 , -0.625 , -0.75 ,\n", - " -0.875 , -1. ]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.49333333333333, 'EffectiveTE': 5.49333333333333, 'RareFactor': 8.0, 'RepetitionTime': 2000.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h0m32s0ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncOrder1': 'CENTRIC_ENC', 'EncMatrix': array([256., 128.]), 'EncSteps1': array([ 0., 8., 16., 24., 32., 40., 48., 56., -1., -9., -17.,\n", - " -25., -33., -41., -49., -57., 1., 9., 17., 25., 33., 41.,\n", - " 49., 57., -2., -10., -18., -26., -34., -42., -50., -58., 2.,\n", - " 10., 18., 26., 34., 42., 50., 58., -3., -11., -19., -27.,\n", - " -35., -43., -51., -59., 3., 11., 19., 27., 35., 43., 51.,\n", - " 59., -4., -12., -20., -28., -36., -44., -52., -60., 4., 12.,\n", - " 20., 28., 36., 44., 52., 60., -5., -13., -21., -29., -37.,\n", - " -45., -53., -61., 5., 13., 21., 29., 37., 45., 53., 61.,\n", - " -6., -14., -22., -30., -38., -46., -54., -62., 6., 14., 22.,\n", - " 30., 38., 46., 54., 62., -7., -15., -23., -31., -39., -47.,\n", - " -55., -63., 7., 15., 23., 31., 39., 47., 55., 63., -8.,\n", - " -16., -24., -32., -40., -48., -56., -64.]), 'EncCentralStep1': 1.0, 'EncTotalAccel': 1.0, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.55, 'MinEchoTime': 5.49333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 15.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Sharp', 'DigRes': 20.0, 'DigDw': 0.01, 'DigSw': 100000.0, 'DigNp': 256.0, 'DigShift': 68.0, 'DigGroupDel': 0.68, 'DigDur': 2.56, 'DigEndDelMin': 0.0499999999999998, 'DigEndDelOpt': 0.1588, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '2D', 'Isotropic': 'Isotropic_Fov', 'Fov': array([25., 25.]), 'FovCm': array([2.5, 2.5]), 'SpatResol': 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90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'Off', 'FovSatNSlices': 1.0, 'FovSatSliceOrient': 'sagittal', 'FovSatThick': 0.178020999884616, 'FovSatOffset': 0.0, 'FovSatSliceVec': array([[1., 0., 0.]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 20.0, 'FovSatModuleTime': 0.0, 'FovSatFL': 0.0, 'SatD0': 1e-06, 'SatD1': 1e-06, 'SatD2': 1e-06, 'SatP0': 10.0, 'SatLp0': 0.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 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'ACQ_phase2_offset': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'ACQ_slice_sepn': 1.0, 'ACQ_slice_sepn_mode': 'Contiguous', 'ACQ_slice_thick': 1.0, 'ACQ_slice_offset': array([-5.4, -4.4, -3.4, -2.4, -1.4, -0.4, 0.6, 1.6, 2.6, 3.6, 4.6,\n", - " 5.6, 6.6, 7.6, 8.6]), 'ACQ_obj_order': array([ 0., 2., 4., 6., 8., 10., 12., 14., 1., 3., 5., 7., 9.,\n", - " 11., 13.]), 'ACQ_flip_angle': 180.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 5.49333333333333, 'ACQ_inter_echo_time': 5.49333333333333, 'ACQ_recov_time': 1958.8, 'ACQ_repetition_time': 2000.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:11:59 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689963119.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 68.003173828125, 'FRQLO3': 0.0, 'DATE': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([ 7.89938146, -2.08857153, 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 50. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 7.89938146, 17.49518798, 30. , 30. , 30. ,\n", - " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': 'hermite.rfc', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_standard', 'DECIM': 200.0, 'DSPFVS': 20.0, 'ACQ_scan_shift': -136.0, 'DEOSC': 3125.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", - " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", - " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 7.21022438, 7.21022438, 7.21022438],\n", - " [ -6.10095909, -6.10095909, -6.10095909],\n", - " [ 7.21022438, 7.21022438, 7.21022438],\n", - " [ 15. , 15. , 15. ],\n", - " [ 17.44857383, 17.44857383, 17.44857383],\n", - " [ 6.28341994, 6.28341994, 6.28341994],\n", - " [ 8.93641947, 8.93641947, 8.93641947],\n", - " [-57. , -57. , -57. ],\n", - " [ -8.93641947, -8.93641947, -8.93641947],\n", - " [ 57. , 57. , 57. ],\n", - " [ 15. , 15. , 15. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]],\n", - "\n", - " [[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]]]), 'NSLICES': 15.0, 'ACQ_rare_factor': 8.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1.]), 'ACQ_spatial_size_1': 128.0, 'ACQ_spatial_phase_1': array([ 0. , 0.125 , 0.25 , 0.375 , 0.5 , 0.625 ,\n", - " 0.75 , 0.875 , -0.015625, -0.140625, -0.265625, -0.390625,\n", - " -0.515625, -0.640625, -0.765625, -0.890625, 0.015625, 0.140625,\n", - " 0.265625, 0.390625, 0.515625, 0.640625, 0.765625, 0.890625,\n", - " -0.03125 , -0.15625 , -0.28125 , -0.40625 , -0.53125 , -0.65625 ,\n", - " -0.78125 , -0.90625 , 0.03125 , 0.15625 , 0.28125 , 0.40625 ,\n", - " 0.53125 , 0.65625 , 0.78125 , 0.90625 , -0.046875, -0.171875,\n", - " -0.296875, -0.421875, -0.546875, -0.671875, -0.796875, -0.921875,\n", - " 0.046875, 0.171875, 0.296875, 0.421875, 0.546875, 0.671875,\n", - " 0.796875, 0.921875, -0.0625 , -0.1875 , -0.3125 , -0.4375 ,\n", - " -0.5625 , -0.6875 , -0.8125 , -0.9375 , 0.0625 , 0.1875 ,\n", - " 0.3125 , 0.4375 , 0.5625 , 0.6875 , 0.8125 , 0.9375 ,\n", - " -0.078125, -0.203125, -0.328125, -0.453125, -0.578125, -0.703125,\n", - " -0.828125, -0.953125, 0.078125, 0.203125, 0.328125, 0.453125,\n", - " 0.578125, 0.703125, 0.828125, 0.953125, -0.09375 , -0.21875 ,\n", - " -0.34375 , -0.46875 , -0.59375 , -0.71875 , -0.84375 , -0.96875 ,\n", - " 0.09375 , 0.21875 , 0.34375 , 0.46875 , 0.59375 , 0.71875 ,\n", - " 0.84375 , 0.96875 , -0.109375, -0.234375, -0.359375, -0.484375,\n", - " -0.609375, -0.734375, -0.859375, -0.984375, 0.109375, 0.234375,\n", - " 0.359375, 0.484375, 0.609375, 0.734375, 0.859375, 0.984375,\n", - " -0.125 , -0.25 , -0.375 , -0.5 , -0.625 , -0.75 ,\n", - " -0.875 , -1. ]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.49333333333333, 'EffectiveTE': 5.49333333333333, 'RareFactor': 8.0, 'RepetitionTime': 2000.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h0m32s0ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncOrder1': 'CENTRIC_ENC', 'EncMatrix': array([256., 128.]), 'EncSteps1': array([ 0., 8., 16., 24., 32., 40., 48., 56., -1., -9., -17.,\n", - " -25., -33., -41., -49., -57., 1., 9., 17., 25., 33., 41.,\n", - " 49., 57., -2., -10., -18., -26., -34., -42., -50., -58., 2.,\n", - " 10., 18., 26., 34., 42., 50., 58., -3., -11., -19., -27.,\n", - " -35., -43., -51., -59., 3., 11., 19., 27., 35., 43., 51.,\n", - " 59., -4., -12., -20., -28., -36., -44., -52., -60., 4., 12.,\n", - " 20., 28., 36., 44., 52., 60., -5., -13., -21., -29., -37.,\n", - " -45., -53., -61., 5., 13., 21., 29., 37., 45., 53., 61.,\n", - " -6., -14., -22., -30., -38., -46., -54., -62., 6., 14., 22.,\n", - " 30., 38., 46., 54., 62., -7., -15., -23., -31., -39., -47.,\n", - " -55., -63., 7., 15., 23., 31., 39., 47., 55., 63., -8.,\n", - " -16., -24., -32., -40., -48., -56., -64.]), 'EncCentralStep1': 1.0, 'EncTotalAccel': 1.0, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.55, 'MinEchoTime': 5.49333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 15.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Sharp', 'DigRes': 20.0, 'DigDw': 0.01, 'DigSw': 100000.0, 'DigNp': 256.0, 'DigShift': 68.0, 'DigGroupDel': 0.68, 'DigDur': 2.56, 'DigEndDelMin': 0.0499999999999998, 'DigEndDelOpt': 0.1588, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '2D', 'Isotropic': 'Isotropic_Fov', 'Fov': array([25., 25.]), 'FovCm': array([2.5, 2.5]), 'SpatResol': array([0.09765625, 0.1953125 ]), 'Matrix': array([256., 128.]), 'MinMatrix': array([32., 32.]), 'MaxMatrix': array([2048., 2048.]), 'AntiAlias': array([1., 1.]), 'MaxAntiAlias': array([2., 8.]), 'SliceThick': 1.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': array([ 0., 2., 4., 6., 8., 10., 12., 14., 1., 3., 5., 7., 9.,\n", - " 11., 13.]), 'NSPacks': 1.0, 'SPackArrNSlices': 15.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'L_R', 'SPackArrReadOffset': -1.2, 'SPackArrPhase1Offset': 0.0, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 1.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': 0.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[ 1., -0., 0.],\n", - " [-0., -0., 1.],\n", - " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([10. , 8.6, 10.4]), 'FovSatOffset': array([-10.7 , 15.678021, -18.821979]), 'FovSatSliceVec': array([[ 0., 1., -0.],\n", - " [ 1., 0., 0.],\n", - " [ 1., 0., 0.]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[ 0. , 0.00848262, -0. ],\n", - " [ 0.00986351, 0. , 0. 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-1., -1.,\n", - " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", - " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 0.55463264, 0.55463264, 0.55463264],\n", - " [-0.46930455, -0.46930455, -0.46930455],\n", - " [ 0.55463264, 0.55463264, 0.55463264],\n", - " [15. , 15. , 15. ],\n", - " [11.17723739, 11.17723739, 11.17723739],\n", - " [ 7.85427492, 7.85427492, 7.85427492],\n", - " [ 2.76194283, 2.76194283, 2.76194283],\n", - " [-2.32374998, -2.32374998, -2.32374998],\n", - " [-2.76194283, -2.76194283, -2.76194283],\n", - " [ 2.32374998, 2.32374998, 2.32374998],\n", - " [ 7. , 7. , 7. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[-0., -0., 1.],\n", - " [ 1., -0., 0.],\n", - " [ 0., 1., 0.]]]), 'NSLICES': 1.0, 'ACQ_rare_factor': 4.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1., -1.]), 'ACQ_spatial_size_1': 36.0, 'ACQ_spatial_phase_1': array([-0.73684211, -0.26315789, 0.21052632, 0.68421053, -0.68421053,\n", - " -0.21052632, 0.26315789, 0.73684211, -0.63157895, -0.15789474,\n", - " 0.31578947, 0.78947368, -0.57894737, -0.10526316, 0.36842105,\n", - " 0.84210526, -0.52631579, -0.05263158, 0.42105263, 0.89473684,\n", - " -0.47368421, 0. , 0.47368421, -0.94736842, -0.42105263,\n", - " 0.05263158, 0.52631579, -0.89473684, -0.36842105, 0.10526316,\n", - " 0.57894737, -0.84210526, -0.31578947, 0.15789474, 0.63157895,\n", - " -0.78947368]), 'ACQ_spatial_size_2': 25.0, 'ACQ_spatial_phase_2': array([-0.96, -0.88, -0.8 , -0.72, -0.64, -0.56, -0.48, -0.4 , -0.32,\n", - " -0.24, -0.16, -0.08, 0. , 0.08, 0.16, 0.24, 0.32, 0.4 ,\n", - " 0.48, 0.56, 0.64, 0.72, 0.8 , 0.88, 0.96]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.33333333333333, 'EffectiveTE': 10.6666666666667, 'RareFactor': 4.0, 'RepetitionTime': 500.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h1m52s500ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncZfAccel2': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncOrder2': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncStart2': -1.0, 'EncMatrix': array([80., 36., 25.]), 'EncSteps1': array([-14., -5., 4., 13., -13., -4., 5., 14., -12., -3., 6.,\n", - " 15., -11., -2., 7., 16., -10., -1., 8., 17., -9., 0.,\n", - " 9., -18., -8., 1., 10., -17., -7., 2., 11., -16., -6.,\n", - " 3., 12., -15.]), 'EncSteps2': array([-12., -11., -10., -9., -8., -7., -6., -5., -4., -3., -2.,\n", - " -1., 0., 1., 2., 3., 4., 5., 6., 7., 8., 9.,\n", - " 10., 11., 12.]), 'EncCentralStep1': 2.0, 'EncCentralStep2': 1.0, 'EncTotalAccel': 1.05555555555556, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.75, 'MinEchoTime': 4.47333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 7.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Medium', 'DigRes': 20.0, 'DigDw': 0.005, 'DigSw': 200000.0, 'DigNp': 80.0, 'DigShift': 36.0, 'DigGroupDel': 0.18, 'DigDur': 0.4, 'DigEndDelMin': 0.05, 'DigEndDelOpt': 0.0824032403240323, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '3D', 'Isotropic': 'Isotropic_None', 'Fov': array([20., 14., 13.]), 'FovCm': array([2. , 1.4, 1.3]), 'SpatResol': array([0.5 , 0.4375, 0.52 ]), 'Matrix': array([40., 32., 25.]), 'MinMatrix': array([32., 32., 8.]), 'MaxMatrix': array([2048., 2048., 256.]), 'AntiAlias': array([2. , 1.1875, 1. ]), 'MaxAntiAlias': array([2., 8., 8.]), 'SliceThick': 13.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': 0.0, 'NSPacks': 1.0, 'SPackArrNSlices': 1.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'H_F', 'SPackArrReadOffset': -1.6, 'SPackArrPhase1Offset': -0.9, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 0.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': -12.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[-0., -0., 1.],\n", - " [ 1., -0., 0.],\n", - " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([15. , 10.74354067, 10.21913876]), 'FovSatOffset': array([-13.2 , -13.3 , 11.20023923]), 'FovSatSliceVec': array([[0., 1., 0.],\n", - " [1., 0., 0.],\n", - " [1., 0., 0.]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[0. , 0.00565508, 0. ],\n", - " [0.00789555, 0. , 0. ],\n", - " [0.00830072, 0. , 0. ]]), 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 7.0, 'FovSatModuleTime': 9.7, 'FovSatFL': array([-4752. , -6684.94700276, 5918.43337391]), 'SatD0': 0.00015, 'SatD1': 1e-05, 'SatD2': 0.002, 'SatP0': 1000.0, 'SatLp0': 3.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 0.0, 'InFlowSatGap': 0.0, 'InFlowSatSide': 0.0, 'FlowSatPulse': '1 0.001 90 30 100 0 100 LIB_EXCITATION', 'FlowSatDeriveGainMode': 'By_DeriveGains', 'InFlowSatSpoilTime': 2.0, 'InFlowSatSpoilGrad': 20.0, 'InFlowSatModuleTime': 0.0, 'SfD0': 1e-06, 'SfD1': 1e-06, 'SfD2': 1e-06, 'SfP0': 10.0, 'SfLp0': 0.0, 'MotionSupOnOff': 'Off', 'FlipBackOnOff': 'Off', 'EchoTime1': 10.6666666666667, 'EchoTime2': 10.6666666666667, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'END': ''}, 'recons': {'1': {'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([80., 36., 25.]), 'RECO_ft_size': array([80., 38., 25.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([40., 32., 25.]), 'RECO_offset': array([[20.],\n", - " [ 3.],\n", - " [ 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC NO_BC', 'RECO_bc_start': array([60., 27., 19.]), 'RECO_bc_len': array([20., 9., 6.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0., 0.]), 'RECO_qopts': 'CONJ_AND_QNEG NO_QOPTS NO_QOPTS', 'RECO_wdw_mode': 'NO_WDW NO_WDW NO_WDW', 'RECO_lb': array([-0.5, -0.5, -0.5]), 'RECO_sw': array([2.e+05, 1.e+00, 1.e+00]), 'RECO_gb': array([0.5, 0.5, 0.5]), 'RECO_sbs': array([1., 1., 1.]), 'RECO_tm1': array([0.25, 0.25, 0.25]), 'RECO_tm2': array([0.75, 0.75, 0.75]), 'RECO_ft_mode': 'COMPLEX_FT COMPLEX_FT COMPLEX_FT', 'RECO_pc_mode': 'NO_PC NO_PC NO_PC', 'RECO_pc_lin': ['(0, 0)', '(0, 0)', '(0, 0)'], 'RECO_rotate': array([[0. ],\n", - " [0.44736842],\n", - " [0.44 ]]), 'RECO_ppc_mode': 'NO_PPC', 'RECO_ref_image': 0.0, 'RECO_nr_supports': 0.4, 'RECO_sig_threshold': 0.15, 'RECO_ppc_degree': 1.0, 'RECO_ppc_coeffs': array([[[0., 0.],\n", - " [0., 0.],\n", - " [0., 0.]]]), 'RECO_dc_elim': 'No', 'RECO_transposition': 1.0, 'RECO_image_type': 'MAGNITUDE_IMAGE', 'RECO_image_threshold': 0.15, 'RECO_ir_scale': 10.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_range': 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40., 25.]), 'VisuCoreDimDesc': 'spatial spatial spatial', 'VisuCoreExtent': array([14., 20., 13.]), 'VisuCoreFrameThickness': 13.0, 'VisuCoreUnits': ['mm', 'mm', 'mm'], 'VisuCoreOrientation': array([[ 1., 0., 0., 0., 0., -1., 0., 1., 0.]]), 'VisuCorePosition': array([[-6.1, -7.1, 8.4]]), 'VisuCoreDataMin': 26.0, 'VisuCoreDataMax': 32766.0, 'VisuCoreDataOffs': 0.0, 'VisuCoreDataSlope': 84.4009720865093, 'VisuCoreFrameType': 'MAGNITUDE_IMAGE', 'VisuCoreWordType': '_16BIT_SGN_INT', 'VisuCoreByteOrder': 'littleEndian', 'VisuCoreDiskSliceOrder': 'disk_reverse_slice_order', 'VisuSubjectName': 'DL_AI2', 'VisuSubjectId': 'DL_AI2', 'VisuSubjectBirthDate': '', 'VisuSubjectSex': 'FEMALE', 'VisuSubjectComment': 'DL_AI2', 'VisuStudyUid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'VisuStudyDate': '11:51:04 21 Jul 2023', 'VisuStudyId': '684811_2023_07_21', 'VisuStudyNumber': 2.0, 'VisuSubjectWeight': 5.0, 'VisuStudyReferringPhysician': '', 'VisuStudyDescription': '684811_2023_07_21', 'VisuSeriesNumber': 262145.0, 'VisuSubjectPosition': 'Head_Supine', 'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:15:56 21 Jul 2023', 'VisuAcqEchoTrainLength': 4.0, 'VisuAcqSequenceName': '(RARE (pvm))', 'VisuAcqNumberOfAverages': 1.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 500.0, 'VisuAcqPhaseEncSteps': 36.0, 'VisuAcqPixelBandwidth': 2500.0, 'VisuAcqFlipAngle': 180.0, 'VisuAcqSize': array([36., 80., 25.]), 'VisuAcqImageSizeAccellerated': 'Yes', 'VisuAcqImagePhaseEncDir': 'row_slice_dir', 'VisuAcqEchoTime': 10.6666666666667, 'VisuAcquisitionProtocol': '07b_RARE_8_3D_T2w_cor', 'VisuAcqScanTime': 112500.0, 'END': ''}}}}, '5': {'acqp': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'PULPROG': 'RARE.ppg', 'GRDPROG': '', 'ACQ_experiment_mode': 'SingleExperiment', 'ACQ_user_filter': 'No', 'ACQ_DS_enabled': 'Yes', 'ACQ_switch_pll_enabled': 'No', 'ACQ_preload': 0.0, 'ACQ_dim': 3.0, 'ACQ_dim_desc': 'Spatial Spatial Spatial', 'ACQ_size': array([160., 36., 25.]), 'ACQ_ns_list_size': 1.0, 'ACQ_ns': 1.0, 'ACQ_phase_factor': 4.0, 'ACQ_scan_size': 'One_scan', 'NI': 1.0, 'NA': 1.0, 'NAE': 1.0, 'NR': 1.0, 'DS': 2.0, 'D': array([4.60092021e-01, 4.65000000e-04, 8.50000000e-04, 2.50000000e-05,\n", - " 1.00000000e-04, 3.00000000e-04, 5.50000000e-04, 0.00000000e+00,\n", - " 1.00000000e-05, 1.80000000e-03, 1.00000000e-05, 5.50000000e-04,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00]), 'P': array([1000. , 633.33333333, 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ]), 'PL': array([ 0., 120., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'TPQQ': ['(, 7.89938145571436, 0)', '(, -2.08857153290193, 0)', '(< >, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(< >, 30, 0)'], 'DPQQ': ['(<>, 50, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(, 7.89938145571436, 0)', '(< gauss512.exc>, 17.4951879761457, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)'], 'SW_h': 200000.0, 'SW': 333.618738468542, 'FW': 0.0, 'RG': 11.3, 'AQ_mod': 'qdig', 'DR': 20.0, 'PAPS': 'QP', 'PH_ref': 0.0, 'ACQ_BF_enable': 'Yes', 'BF1': 599.486710243222, 'SFO1': 599.486710243222, 'O1': 0.0, 'ACQ_O1_list_size': 1.0, 'ACQ_O1_list': 211.846153846154, 'ACQ_O1B_list_size': 1.0, 'ACQ_O1B_list': -9500.0, 'BF2': 599.6429484, 'SFO2': 599.6429484, 'O2': 0.0, 'ACQ_O2_list_size': 1.0, 'ACQ_O2_list': 0.0, 'BF3': 599.6429484, 'SFO3': 599.6429484, 'O3': 0.0, 'ACQ_O3_list_size': 1.0, 'ACQ_O3_list': 0.0, 'BF4': 599.6429484, 'SFO4': 599.6429484, 'O4': 0.0, 'BF5': 599.6429484, 'SFO5': 599.6429484, 'O5': 0.0, 'BF6': 599.6429484, 'SFO6': 599.6429484, 'O6': 0.0, 'BF7': 599.6429484, 'SFO7': 599.6429484, 'O7': 0.0, 'BF8': 599.6429484, 'SFO8': 599.6429484, 'O8': 0.0, 'NUC1': '1H', 'NUC2': 'off', 'NUC3': 'off', 'NUC4': 'off', 'NUC5': 'off', 'NUC6': 'off', 'NUC7': 'off', 'NUC8': 'off', 'NUCLEUS': '1H', 'ACQ_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'ACQ_coils': ['(, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<31P generic>, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)'], 'ACQ_coil_elements': ['(0, 3, -1, 1, 0, 0, 0, 0, 0, 0, <1H>, 0, noPin, preamp_probe, 0, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)', '(1, 3, -1, 1, 0, 0, 0, 0, 0, 0, <31P >, 0, noPin, preamp_probe, 3, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)'], 'ACQ_operation_mode': '[1H] TX/RX Volume', 'ACQ_Routing': 'RouteDefinedByCoil', 'L': array([0., 8., 9., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'ACQ_vd_list_size': 1.0, 'ACQ_vd_list': 1e-06, 'ACQ_vp_list_size': 1.0, 'ACQ_vp_list': 1e-06, 'ACQ_status': 'S040', 'ACQ_Routing_base': '1H', 'ACQ_protocol_location': 'DL_AI2', 'ACQ_protocol_name': '07b_RARE_8_3D_T2w_cor', 'ACQ_scan_name': '07b_RARE_8_3D_T2w_cor', 'ACQ_method': 'RARE', 'ACQ_completed': 'Yes', 'ACQ_pipe_status': 'Wrapup', 'ACQ_scans_completed': 0.0, 'ACQ_nr_completed': 1.0, 'ACQ_total_completed': 900.0, 'ACQ_word_size': '_32_BIT', 'NECHOES': 4.0, 'ACQ_n_echo_images': 1.0, 'ACQ_n_movie_frames': 1.0, 'ACQ_echo_descr': '', 'ACQ_movie_descr': '', 'ACQ_fov': array([4. , 1.6625, 1.3 ]), 'ACQ_read_ext': 2.0, 'ACQ_slice_angle': 0.0, 'ACQ_slice_orient': 'Arbitrary_Oblique', 'ACQ_patient_pos': 'Head_Supine', 'ACQ_read_offset': -1.9, 'ACQ_phase1_offset': -0.9, 'ACQ_phase2_offset': 0.0, 'ACQ_slice_sepn': 1.0, 'ACQ_slice_sepn_mode': 'Contiguous', 'ACQ_slice_thick': 13.0, 'ACQ_slice_offset': 0.6, 'ACQ_obj_order': 0.0, 'ACQ_flip_angle': 180.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 10.6666666666667, 'ACQ_inter_echo_time': 5.33333333333333, 'ACQ_recov_time': 481.333333333333, 'ACQ_repetition_time': 500.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:19:44 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689963584.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 36.0593719482422, 'FRQLO3': 0.0, 'DATE': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([ 7.89938146, -2.08857153, 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 50. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 7.89938146, 17.49518798, 30. , 30. , 30. ,\n", - " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': 'hermite.rfc', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_medium', 'DECIM': 100.0, 'DSPFVS': 23.0, 'ACQ_scan_shift': -72.0, 'DEOSC': 1165.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", - " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", - " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 0.55463264, 0.55463264, 0.55463264],\n", - " [-0.46930455, -0.46930455, -0.46930455],\n", - " [ 0.55463264, 0.55463264, 0.55463264],\n", - " [15. , 15. , 15. ],\n", - " [11.17723739, 11.17723739, 11.17723739],\n", - " [ 7.85427492, 7.85427492, 7.85427492],\n", - " [ 2.76194283, 2.76194283, 2.76194283],\n", - " [-2.32374998, -2.32374998, -2.32374998],\n", - " [-2.76194283, -2.76194283, -2.76194283],\n", - " [ 2.32374998, 2.32374998, 2.32374998],\n", - " [ 7. , 7. , 7. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[-0., -0., 1.],\n", - " [ 1., -0., 0.],\n", - " [ 0., 1., 0.]]]), 'NSLICES': 1.0, 'ACQ_rare_factor': 4.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1., -1.]), 'ACQ_spatial_size_1': 36.0, 'ACQ_spatial_phase_1': array([-0.73684211, -0.26315789, 0.21052632, 0.68421053, -0.68421053,\n", - " -0.21052632, 0.26315789, 0.73684211, -0.63157895, -0.15789474,\n", - " 0.31578947, 0.78947368, -0.57894737, -0.10526316, 0.36842105,\n", - " 0.84210526, -0.52631579, -0.05263158, 0.42105263, 0.89473684,\n", - " -0.47368421, 0. , 0.47368421, -0.94736842, -0.42105263,\n", - " 0.05263158, 0.52631579, -0.89473684, -0.36842105, 0.10526316,\n", - " 0.57894737, -0.84210526, -0.31578947, 0.15789474, 0.63157895,\n", - " -0.78947368]), 'ACQ_spatial_size_2': 25.0, 'ACQ_spatial_phase_2': array([-0.96, -0.88, -0.8 , -0.72, -0.64, -0.56, -0.48, -0.4 , -0.32,\n", - " -0.24, -0.16, -0.08, 0. , 0.08, 0.16, 0.24, 0.32, 0.4 ,\n", - " 0.48, 0.56, 0.64, 0.72, 0.8 , 0.88, 0.96]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.33333333333333, 'EffectiveTE': 10.6666666666667, 'RareFactor': 4.0, 'RepetitionTime': 500.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h1m52s500ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncZfAccel2': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncOrder2': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncStart2': -1.0, 'EncMatrix': array([80., 36., 25.]), 'EncSteps1': array([-14., -5., 4., 13., -13., -4., 5., 14., -12., -3., 6.,\n", - " 15., -11., -2., 7., 16., -10., -1., 8., 17., -9., 0.,\n", - " 9., -18., -8., 1., 10., -17., -7., 2., 11., -16., -6.,\n", - " 3., 12., -15.]), 'EncSteps2': array([-12., -11., -10., -9., -8., -7., -6., -5., -4., -3., -2.,\n", - " -1., 0., 1., 2., 3., 4., 5., 6., 7., 8., 9.,\n", - " 10., 11., 12.]), 'EncCentralStep1': 2.0, 'EncCentralStep2': 1.0, 'EncTotalAccel': 1.05555555555556, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.75, 'MinEchoTime': 4.47333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 7.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Medium', 'DigRes': 20.0, 'DigDw': 0.005, 'DigSw': 200000.0, 'DigNp': 80.0, 'DigShift': 36.0, 'DigGroupDel': 0.18, 'DigDur': 0.4, 'DigEndDelMin': 0.05, 'DigEndDelOpt': 0.0824032403240323, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '3D', 'Isotropic': 'Isotropic_None', 'Fov': array([20., 14., 13.]), 'FovCm': array([2. , 1.4, 1.3]), 'SpatResol': array([0.5 , 0.4375, 0.52 ]), 'Matrix': array([40., 32., 25.]), 'MinMatrix': array([32., 32., 8.]), 'MaxMatrix': array([2048., 2048., 256.]), 'AntiAlias': array([2. , 1.1875, 1. ]), 'MaxAntiAlias': array([2., 8., 8.]), 'SliceThick': 13.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': 0.0, 'NSPacks': 1.0, 'SPackArrNSlices': 1.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'H_F', 'SPackArrReadOffset': -1.9, 'SPackArrPhase1Offset': -0.9, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 0.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': -12.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[-0., -0., 1.],\n", - " [ 1., -0., 0.],\n", - " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([15. , 10.74354067, 10.21913876]), 'FovSatOffset': array([-13.2 , -13.3 , 11.20023923]), 'FovSatSliceVec': array([[0.000000e+00, 1.000000e+00, 6.123234e-17],\n", - " [1.000000e+00, 0.000000e+00, 0.000000e+00],\n", - " [1.000000e+00, 0.000000e+00, 0.000000e+00]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[0.00000000e+00, 5.65507795e-03, 3.46273655e-19],\n", - " [7.89555062e-03, 0.00000000e+00, 0.00000000e+00],\n", - " [8.30071606e-03, 0.00000000e+00, 0.00000000e+00]]), 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 7.0, 'FovSatModuleTime': 9.7, 'FovSatFL': array([-4752. , -6684.94700276, 5918.43337391]), 'SatD0': 0.00015, 'SatD1': 1e-05, 'SatD2': 0.002, 'SatP0': 1000.0, 'SatLp0': 3.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 0.0, 'InFlowSatGap': 0.0, 'InFlowSatSide': 0.0, 'FlowSatPulse': '1 0.001 90 30 100 0 100 LIB_EXCITATION', 'FlowSatDeriveGainMode': 'By_DeriveGains', 'InFlowSatSpoilTime': 2.0, 'InFlowSatSpoilGrad': 20.0, 'InFlowSatModuleTime': 0.0, 'SfD0': 1e-06, 'SfD1': 1e-06, 'SfD2': 1e-06, 'SfP0': 10.0, 'SfLp0': 0.0, 'MotionSupOnOff': 'Off', 'FlipBackOnOff': 'Off', 'EchoTime1': 10.6666666666667, 'EchoTime2': 10.6666666666667, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'END': ''}, 'recons': {'1': {'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([80., 36., 25.]), 'RECO_ft_size': array([80., 38., 25.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([40., 32., 25.]), 'RECO_offset': array([[20.],\n", - " [ 3.],\n", - " [ 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC NO_BC', 'RECO_bc_start': array([60., 27., 19.]), 'RECO_bc_len': array([20., 9., 6.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0., 0.]), 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'ACQ_phase_enc_start': array([-1., -1., -1.]), 'ACQ_spatial_size_1': 36.0, 'ACQ_spatial_phase_1': array([-0.73684211, -0.26315789, 0.21052632, 0.68421053, -0.68421053,\n", - " -0.21052632, 0.26315789, 0.73684211, -0.63157895, -0.15789474,\n", - " 0.31578947, 0.78947368, -0.57894737, -0.10526316, 0.36842105,\n", - " 0.84210526, -0.52631579, -0.05263158, 0.42105263, 0.89473684,\n", - " -0.47368421, 0. , 0.47368421, -0.94736842, -0.42105263,\n", - " 0.05263158, 0.52631579, -0.89473684, -0.36842105, 0.10526316,\n", - " 0.57894737, -0.84210526, -0.31578947, 0.15789474, 0.63157895,\n", - " -0.78947368]), 'ACQ_spatial_size_2': 25.0, 'ACQ_spatial_phase_2': array([-0.96, -0.88, -0.8 , -0.72, -0.64, -0.56, -0.48, -0.4 , -0.32,\n", - " -0.24, -0.16, -0.08, 0. , 0.08, 0.16, 0.24, 0.32, 0.4 ,\n", - " 0.48, 0.56, 0.64, 0.72, 0.8 , 0.88, 0.96]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.33333333333333, 'EffectiveTE': 10.6666666666667, 'RareFactor': 4.0, 'RepetitionTime': 500.0, 'NAverages': 1.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '0h1m52s500ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncZfAccel2': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncOrder2': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncStart2': -1.0, 'EncMatrix': array([80., 36., 25.]), 'EncSteps1': array([-14., -5., 4., 13., -13., -4., 5., 14., -12., -3., 6.,\n", - " 15., -11., -2., 7., 16., -10., -1., 8., 17., -9., 0.,\n", - " 9., -18., -8., 1., 10., -17., -7., 2., 11., -16., -6.,\n", - " 3., 12., -15.]), 'EncSteps2': array([-12., -11., -10., -9., -8., -7., -6., -5., -4., -3., -2.,\n", - " -1., 0., 1., 2., 3., 4., 5., 6., 7., 8., 9.,\n", - " 10., 11., 12.]), 'EncCentralStep1': 2.0, 'EncCentralStep2': 1.0, 'EncTotalAccel': 1.05555555555556, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.75, 'MinEchoTime': 4.47333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 7.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Medium', 'DigRes': 20.0, 'DigDw': 0.005, 'DigSw': 200000.0, 'DigNp': 80.0, 'DigShift': 36.0, 'DigGroupDel': 0.18, 'DigDur': 0.4, 'DigEndDelMin': 0.05, 'DigEndDelOpt': 0.0824032403240323, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '3D', 'Isotropic': 'Isotropic_None', 'Fov': array([20., 14., 13.]), 'FovCm': array([2. , 1.4, 1.3]), 'SpatResol': array([0.5 , 0.4375, 0.52 ]), 'Matrix': array([40., 32., 25.]), 'MinMatrix': array([32., 32., 8.]), 'MaxMatrix': array([2048., 2048., 256.]), 'AntiAlias': array([2. , 1.1875, 1. ]), 'MaxAntiAlias': array([2., 8., 8.]), 'SliceThick': 13.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': 0.0, 'NSPacks': 1.0, 'SPackArrNSlices': 1.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'H_F', 'SPackArrReadOffset': -2.1, 'SPackArrPhase1Offset': -0.9, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 0.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': -12.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[-0., -0., 1.],\n", - " [ 1., -0., 0.],\n", - " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([15. , 10.74354067, 10.21913876]), 'FovSatOffset': array([-13.2 , -13.3 , 11.20023923]), 'FovSatSliceVec': array([[0.000000e+00, 1.000000e+00, 6.123234e-17],\n", - " [1.000000e+00, 0.000000e+00, 0.000000e+00],\n", - " [1.000000e+00, 0.000000e+00, 0.000000e+00]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[0.00000000e+00, 5.65507795e-03, 3.46273655e-19],\n", - " [7.89555062e-03, 0.00000000e+00, 0.00000000e+00],\n", - " [8.30071606e-03, 0.00000000e+00, 0.00000000e+00]]), 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 7.0, 'FovSatModuleTime': 9.7, 'FovSatFL': array([-4752. , -6684.94700276, 5918.43337391]), 'SatD0': 0.00015, 'SatD1': 1e-05, 'SatD2': 0.002, 'SatP0': 1000.0, 'SatLp0': 3.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 0.0, 'InFlowSatGap': 0.0, 'InFlowSatSide': 0.0, 'FlowSatPulse': '1 0.001 90 30 100 0 100 LIB_EXCITATION', 'FlowSatDeriveGainMode': 'By_DeriveGains', 'InFlowSatSpoilTime': 2.0, 'InFlowSatSpoilGrad': 20.0, 'InFlowSatModuleTime': 0.0, 'SfD0': 1e-06, 'SfD1': 1e-06, 'SfD2': 1e-06, 'SfP0': 10.0, 'SfLp0': 0.0, 'MotionSupOnOff': 'Off', 'FlipBackOnOff': 'Off', 'EchoTime1': 10.6666666666667, 'EchoTime2': 10.6666666666667, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'END': ''}, 'recons': {'1': {'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([80., 36., 25.]), 'RECO_ft_size': array([80., 38., 25.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([40., 32., 25.]), 'RECO_offset': array([[20.],\n", - " [ 3.],\n", - " [ 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC NO_BC', 'RECO_bc_start': array([60., 27., 19.]), 'RECO_bc_len': array([20., 9., 6.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0., 0.]), 'RECO_qopts': 'CONJ_AND_QNEG NO_QOPTS NO_QOPTS', 'RECO_wdw_mode': 'NO_WDW NO_WDW NO_WDW', 'RECO_lb': array([-0.5, -0.5, -0.5]), 'RECO_sw': array([2.e+05, 1.e+00, 1.e+00]), 'RECO_gb': array([0.5, 0.5, 0.5]), 'RECO_sbs': array([1., 1., 1.]), 'RECO_tm1': array([0.25, 0.25, 0.25]), 'RECO_tm2': array([0.75, 0.75, 0.75]), 'RECO_ft_mode': 'COMPLEX_FT COMPLEX_FT COMPLEX_FT', 'RECO_pc_mode': 'NO_PC NO_PC NO_PC', 'RECO_pc_lin': ['(0, 0)', '(0, 0)', '(0, 0)'], 'RECO_rotate': array([[0. ],\n", - " [0.44736842],\n", - " [0.44 ]]), 'RECO_ppc_mode': 'NO_PPC', 'RECO_ref_image': 0.0, 'RECO_nr_supports': 0.4, 'RECO_sig_threshold': 0.15, 'RECO_ppc_degree': 1.0, 'RECO_ppc_coeffs': array([[[0., 0.],\n", - " [0., 0.],\n", - " [0., 0.]]]), 'RECO_dc_elim': 'No', 'RECO_transposition': 1.0, 'RECO_image_type': 'MAGNITUDE_IMAGE', 'RECO_image_threshold': 0.15, 'RECO_ir_scale': 10.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'RECO_map_percentile': array([ 1. , 99.99]), 'RECO_map_error': 0.0025, 'RECO_globex': 0.0, 'RECO_minima': 26.0, 'RECO_maxima': 32766.0, 'RECO_map_min': -2806357.20208485, 'RECO_map_max': 2806357.20208485, 'RECO_map_offset': 0.0, 'RECO_map_slope': 0.0116759901866317, 'RECO_byte_order': 'littleEndian', 'RECO_time': '11:24:09 21 Jul 2023', 'RECO_abs_time': 1689963849.0, 'RECO_base_image_uid': '2.16.756.5.5.100.380435303.14105.1689963964.15', 'GS_reco_display': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'END': ''}, 'visu_pars': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'VisuVersion': 1.0, 'VisuUid': '2.16.756.5.5.100.380435303.14105.1689963964.15', 'VisuCreator': 'ParaVision', 'VisuCreatorVersion': '5.1', 'VisuCreationDate': '11:24:09 21 Jul 2023', 'VisuCoreFrameCount': 1.0, 'VisuCoreDim': 3.0, 'VisuCoreSize': array([32., 40., 25.]), 'VisuCoreDimDesc': 'spatial spatial spatial', 'VisuCoreExtent': array([14., 20., 13.]), 'VisuCoreFrameThickness': 13.0, 'VisuCoreUnits': ['mm', 'mm', 'mm'], 'VisuCoreOrientation': array([[ 1., 0., 0., 0., 0., -1., 0., 1., 0.]]), 'VisuCorePosition': array([[-6.1, -7.1, 7.9]]), 'VisuCoreDataMin': 26.0, 'VisuCoreDataMax': 32766.0, 'VisuCoreDataOffs': 0.0, 'VisuCoreDataSlope': 85.6458410820644, 'VisuCoreFrameType': 'MAGNITUDE_IMAGE', 'VisuCoreWordType': '_16BIT_SGN_INT', 'VisuCoreByteOrder': 'littleEndian', 'VisuCoreDiskSliceOrder': 'disk_reverse_slice_order', 'VisuSubjectName': 'DL_AI2', 'VisuSubjectId': 'DL_AI2', 'VisuSubjectBirthDate': '', 'VisuSubjectSex': 'FEMALE', 'VisuSubjectComment': 'DL_AI2', 'VisuStudyUid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'VisuStudyDate': '11:51:04 21 Jul 2023', 'VisuStudyId': '684811_2023_07_21', 'VisuStudyNumber': 2.0, 'VisuSubjectWeight': 5.0, 'VisuStudyReferringPhysician': '', 'VisuStudyDescription': '684811_2023_07_21', 'VisuSeriesNumber': 393217.0, 'VisuSubjectPosition': 'Head_Supine', 'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuAcqSoftwareVersion': '5.1', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:24:09 21 Jul 2023', 'VisuAcqEchoTrainLength': 4.0, 'VisuAcqSequenceName': '(RARE (pvm))', 'VisuAcqNumberOfAverages': 1.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 500.0, 'VisuAcqPhaseEncSteps': 36.0, 'VisuAcqPixelBandwidth': 2500.0, 'VisuAcqFlipAngle': 180.0, 'VisuAcqSize': array([36., 80., 25.]), 'VisuAcqImageSizeAccellerated': 'Yes', 'VisuAcqImagePhaseEncDir': 'row_slice_dir', 'VisuAcqEchoTime': 10.6666666666667, 'VisuAcquisitionProtocol': '07b_RARE_8_3D_T2w_cor', 'VisuAcqScanTime': 112500.0, 'END': ''}}}}, '7': {'acqp': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'PULPROG': 'RARE.ppg', 'GRDPROG': '', 'ACQ_experiment_mode': 'SingleExperiment', 'ACQ_user_filter': 'No', 'ACQ_DS_enabled': 'Yes', 'ACQ_switch_pll_enabled': 'No', 'ACQ_preload': 0.0, 'ACQ_dim': 3.0, 'ACQ_dim_desc': 'Spatial Spatial Spatial', 'ACQ_size': array([800., 164., 130.]), 'ACQ_ns_list_size': 1.0, 'ACQ_ns': 1.0, 'ACQ_phase_factor': 4.0, 'ACQ_scan_size': 'One_scan', 'NI': 1.0, 'NA': 2.0, 'NAE': 1.0, 'NR': 1.0, 'DS': 2.0, 'D': array([4.60092021e-01, 4.65000000e-04, 5.00000000e-05, 2.50000000e-05,\n", - " 1.00000000e-04, 3.00000000e-04, 5.50000000e-04, 0.00000000e+00,\n", - " 1.00000000e-05, 1.80000000e-03, 1.00000000e-05, 5.50000000e-04,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,\n", - " 0.00000000e+00, 0.00000000e+00, 0.00000000e+00, 0.00000000e+00]), 'P': array([1000. , 633.33333333, 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ,\n", - " 0. , 0. , 0. , 0. ]), 'PL': array([ 0., 120., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'TPQQ': ['(, 7.89938145571436, 0)', '(, -2.08857153290193, 0)', '(< >, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(< >, 30, 0)'], 'DPQQ': ['(<>, 50, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(, 7.89938145571436, 0)', '(< gauss512.exc>, 17.4951879761457, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)', '(<>, 30, 0)'], 'SW_h': 200000.0, 'SW': 333.618738468542, 'FW': 0.0, 'RG': 11.3, 'AQ_mod': 'qdig', 'DR': 20.0, 'PAPS': 'QP', 'PH_ref': 0.0, 'ACQ_BF_enable': 'Yes', 'BF1': 599.486710243222, 'SFO1': 599.486710243222, 'O1': 0.0, 'ACQ_O1_list_size': 1.0, 'ACQ_O1_list': 211.846153846154, 'ACQ_O1B_list_size': 1.0, 'ACQ_O1B_list': -10500.0, 'BF2': 599.6429484, 'SFO2': 599.6429484, 'O2': 0.0, 'ACQ_O2_list_size': 1.0, 'ACQ_O2_list': 0.0, 'BF3': 599.6429484, 'SFO3': 599.6429484, 'O3': 0.0, 'ACQ_O3_list_size': 1.0, 'ACQ_O3_list': 0.0, 'BF4': 599.6429484, 'SFO4': 599.6429484, 'O4': 0.0, 'BF5': 599.6429484, 'SFO5': 599.6429484, 'O5': 0.0, 'BF6': 599.6429484, 'SFO6': 599.6429484, 'O6': 0.0, 'BF7': 599.6429484, 'SFO7': 599.6429484, 'O7': 0.0, 'BF8': 599.6429484, 'SFO8': 599.6429484, 'O8': 0.0, 'NUC1': '1H', 'NUC2': 'off', 'NUC3': 'off', 'NUC4': 'off', 'NUC5': 'off', 'NUC6': 'off', 'NUC7': 'off', 'NUC8': 'off', 'NUCLEUS': '1H', 'ACQ_coil_config_file': 'EDIT_unknown_unknown_unknown_unknown_1', 'ACQ_coils': ['(, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<31P generic>, , , , 0, VolumeCoil, 600, 0, 1, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)', '(<>, <>, <>, <>, 0, NoCoil, 0, 0, 0, 0)'], 'ACQ_coil_elements': ['(0, 3, -1, 1, 0, 0, 0, 0, 0, 0, <1H>, 0, noPin, preamp_probe, 0, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)', '(1, 3, -1, 1, 0, 0, 0, 0, 0, 0, <31P >, 0, noPin, preamp_probe, 3, 0, 0, voltageMode, hardwareCoded, -36, 0, 0, 0)'], 'ACQ_operation_mode': '[1H] TX/RX Volume', 'ACQ_Routing': 'RouteDefinedByCoil', 'L': array([ 0., 8., 41., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0.]), 'ACQ_vd_list_size': 1.0, 'ACQ_vd_list': 1e-06, 'ACQ_vp_list_size': 1.0, 'ACQ_vp_list': 1e-06, 'ACQ_status': 'S040', 'ACQ_Routing_base': '1H', 'ACQ_protocol_location': 'DL_AI2', 'ACQ_protocol_name': '07c_RARE_8_3D_T2w_cor', 'ACQ_scan_name': '07c_RARE_8_3D_T2w_cor', 'ACQ_method': 'RARE', 'ACQ_completed': 'Yes', 'ACQ_pipe_status': 'Wrapup', 'ACQ_scans_completed': 0.0, 'ACQ_nr_completed': 1.0, 'ACQ_total_completed': 21320.0, 'ACQ_word_size': '_32_BIT', 'NECHOES': 4.0, 'ACQ_n_echo_images': 1.0, 'ACQ_n_movie_frames': 1.0, 'ACQ_echo_descr': '', 'ACQ_movie_descr': '', 'ACQ_fov': array([4. , 1.66, 1.3 ]), 'ACQ_read_ext': 2.0, 'ACQ_slice_angle': 0.0, 'ACQ_slice_orient': 'Arbitrary_Oblique', 'ACQ_patient_pos': 'Head_Supine', 'ACQ_read_offset': -2.1, 'ACQ_phase1_offset': -0.9, 'ACQ_phase2_offset': 0.0, 'ACQ_slice_sepn': 1.0, 'ACQ_slice_sepn_mode': 'Contiguous', 'ACQ_slice_thick': 13.0, 'ACQ_slice_offset': 0.6, 'ACQ_obj_order': 0.0, 'ACQ_flip_angle': 180.0, 'ACQ_flipback': 'No', 'ACQ_echo_time': 10.6666666666667, 'ACQ_inter_echo_time': 5.33333333333333, 'ACQ_recov_time': 481.333333333333, 'ACQ_repetition_time': 500.0, 'ACQ_scan_time': 0.0, 'ACQ_inversion_time': 0.0, 'ACQ_temporal_delay': 0.0, 'ACQ_time': '11:27:33 21 Jul 2023', 'ACQ_time_points': 0.0, 'ACQ_abs_time': 1689964053.0, 'ACQ_operator': 'dhlee', 'ACQ_RF_power': 0.0, 'ACQ_transmitter_coil': '', 'ACQ_contrast_agent': '', 'ACQ_trigger_enable': 'No', 'ACQ_trigger_reference': ' ', 'ACQ_trigger_delay': 1.0, 'ACQ_institution': 'University of Washington', 'ACQ_station': 'spect', 'ACQ_sw_version': 'PV 5.1', 'ACQ_calib_date': '17:08:09 30 Jun 2020', 'ACQ_grad_str_X': 0.0, 'ACQ_grad_str_Y': 0.0, 'ACQ_grad_str_Z': 0.0, 'ACQ_position_X': 0.0, 'ACQ_position_Y': 0.0, 'ACQ_position_Z': 0.0, 'BYTORDA': 'little', 'INSTRUM': 'spect', 'ACQ_adc_overflow': 'No No', 'GRPDLY': 68.0593719482422, 'FRQLO3': 0.0, 'DATE': 0.0, 'FQ1LIST': 'ACQ_O1_list', 'FQ2LIST': 'ACQ_O2_list', 'FQ3LIST': 'ACQ_O3_list', 'FQ8LIST': 'ACQ_O1B_list', 'SP': array([ 7.89938146, -2.08857153, 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 50. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 30. , 30. , 30. , 30. , 30. ,\n", - " 7.89938146, 17.49518798, 30. , 30. , 30. ,\n", - " 30. , 30. ]), 'SPOFFS': array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.,\n", - " 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'SPNAM0': 'hermite.exc', 'SPNAM1': 'hermite.rfc', 'SPNAM2': '', 'SPNAM3': '', 'SPNAM4': '', 'SPNAM5': '', 'SPNAM6': '', 'SPNAM7': '', 'SPNAM8': '', 'SPNAM9': '', 'SPNAM10': '', 'SPNAM11': '', 'SPNAM12': '', 'SPNAM13': '', 'SPNAM14': '', 'SPNAM15': '', 'HPPRGN': 'normal', 'LOCNUC': 'off', 'QNP': 1.0, 'SOLVENT': '', 'DIGMOD': 'digital_mode', 'DIGTYP': 'DRU', 'DQDMODE': 'DQDMODE_add', 'DSPFIRM': 'DSP_standard', 'DECIM': 100.0, 'DSPFVS': 20.0, 'ACQ_scan_shift': -136.0, 'DEOSC': 2765.0, 'DE': 6.0, 'FCUCHAN': array([0., 2., 1., 0., 0., 0., 0., 0., 0., 0.]), 'RSEL': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0.]), 'SWIBOX': array([0., 1., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'POWMOD': 'HIGH', 'HPMOD': array([0., 1., 0., 0., 0., 0., 0., 0.]), 'PRECHAN': array([-1., 3., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", - " -1., -1., -1.]), 'OBSCHAN': array([0., 1., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECCHAN': array([0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECSEL': array([0., 0., 2., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.]), 'RECPRE': array([-1., -1., 0., -1., -1., -1., -1., -1., -1., -1., -1., -1., -1.,\n", - " -1., -1., -1.]), 'NLOGCH': 0.0, 'ACQ_n_trim': 11.0, 'ACQ_trim': array([[ 0.55463264, 0.55463264, 0.55463264],\n", - " [ -0.46930455, -0.46930455, -0.46930455],\n", - " [ 0.55463264, 0.55463264, 0.55463264],\n", - " [ 15. , 15. , 15. ],\n", - " [ 20.8440373 , 20.8440373 , 20.8440373 ],\n", - " [ 7.85427492, 7.85427492, 7.85427492],\n", - " [ 12.08349988, 12.08349988, 12.08349988],\n", - " [-12.08349988, -12.08349988, -12.08349988],\n", - " [-12.08349988, -12.08349988, -12.08349988],\n", - " [ 12.08349988, 12.08349988, 12.08349988],\n", - " [ 7. , 7. , 7. ]]), 'ACQ_scaling_read': 1.0, 'ACQ_scaling_phase': 1.0, 'ACQ_scaling_slice': 1.0, 'ACQ_grad_matrix': array([[[-0., -0., 1.],\n", - " [ 1., -0., 0.],\n", - " [ 0., 1., 0.]]]), 'NSLICES': 1.0, 'ACQ_rare_factor': 4.0, 'ACQ_phase_encoding_mode': 'Read User_Defined_Encoding User_Defined_Encoding', 'ACQ_phase_enc_start': array([-1., -1., -1.]), 'ACQ_spatial_size_1': 164.0, 'ACQ_spatial_phase_1': array([-0.74698795, -0.25301205, 0.24096386, 0.73493976, -0.73493976,\n", - " -0.24096386, 0.25301205, 0.74698795, -0.72289157, -0.22891566,\n", - " 0.26506024, 0.75903614, -0.71084337, -0.21686747, 0.27710843,\n", - " 0.77108434, -0.69879518, -0.20481928, 0.28915663, 0.78313253,\n", - " -0.68674699, -0.19277108, 0.30120482, 0.79518072, -0.6746988 ,\n", - " -0.18072289, 0.31325301, 0.80722892, -0.6626506 , -0.1686747 ,\n", - " 0.3253012 , 0.81927711, -0.65060241, -0.15662651, 0.3373494 ,\n", - " 0.8313253 , -0.63855422, -0.14457831, 0.34939759, 0.84337349,\n", - " -0.62650602, -0.13253012, 0.36144578, 0.85542169, -0.61445783,\n", - " -0.12048193, 0.37349398, 0.86746988, -0.60240964, -0.10843373,\n", - " 0.38554217, 0.87951807, -0.59036145, -0.09638554, 0.39759036,\n", - " 0.89156627, -0.57831325, -0.08433735, 0.40963855, 0.90361446,\n", - " -0.56626506, -0.07228916, 0.42168675, 0.91566265, -0.55421687,\n", - " -0.06024096, 0.43373494, 0.92771084, -0.54216867, -0.04819277,\n", - " 0.44578313, 0.93975904, -0.53012048, -0.03614458, 0.45783133,\n", - " 0.95180723, -0.51807229, -0.02409639, 0.46987952, 0.96385542,\n", - " -0.5060241 , -0.01204819, 0.48192771, 0.97590361, -0.4939759 ,\n", - " 0. , 0.4939759 , -0.98795181, -0.48192771, 0.01204819,\n", - " 0.5060241 , -0.97590361, -0.46987952, 0.02409639, 0.51807229,\n", - " -0.96385542, -0.45783133, 0.03614458, 0.53012048, -0.95180723,\n", - " -0.44578313, 0.04819277, 0.54216867, -0.93975904, -0.43373494,\n", - " 0.06024096, 0.55421687, -0.92771084, -0.42168675, 0.07228916,\n", - " 0.56626506, -0.91566265, -0.40963855, 0.08433735, 0.57831325,\n", - " -0.90361446, -0.39759036, 0.09638554, 0.59036145, -0.89156627,\n", - " -0.38554217, 0.10843373, 0.60240964, -0.87951807, -0.37349398,\n", - " 0.12048193, 0.61445783, -0.86746988, -0.36144578, 0.13253012,\n", - " 0.62650602, -0.85542169, -0.34939759, 0.14457831, 0.63855422,\n", - " -0.84337349, -0.3373494 , 0.15662651, 0.65060241, -0.8313253 ,\n", - " -0.3253012 , 0.1686747 , 0.6626506 , -0.81927711, -0.31325301,\n", - " 0.18072289, 0.6746988 , -0.80722892, -0.30120482, 0.19277108,\n", - " 0.68674699, -0.79518072, -0.28915663, 0.20481928, 0.69879518,\n", - " -0.78313253, -0.27710843, 0.21686747, 0.71084337, -0.77108434,\n", - " -0.26506024, 0.22891566, 0.72289157, -0.75903614]), 'ACQ_spatial_size_2': 130.0, 'ACQ_spatial_phase_2': array([-1. , -0.98461538, -0.96923077, -0.95384615, -0.93846154,\n", - " -0.92307692, -0.90769231, -0.89230769, -0.87692308, -0.86153846,\n", - " -0.84615385, -0.83076923, -0.81538462, -0.8 , -0.78461538,\n", - " -0.76923077, -0.75384615, -0.73846154, -0.72307692, -0.70769231,\n", - " -0.69230769, -0.67692308, -0.66153846, -0.64615385, -0.63076923,\n", - " -0.61538462, -0.6 , -0.58461538, -0.56923077, -0.55384615,\n", - " -0.53846154, -0.52307692, -0.50769231, -0.49230769, -0.47692308,\n", - " -0.46153846, -0.44615385, -0.43076923, -0.41538462, -0.4 ,\n", - " -0.38461538, -0.36923077, -0.35384615, -0.33846154, -0.32307692,\n", - " -0.30769231, -0.29230769, -0.27692308, -0.26153846, -0.24615385,\n", - " -0.23076923, -0.21538462, -0.2 , -0.18461538, -0.16923077,\n", - " -0.15384615, -0.13846154, -0.12307692, -0.10769231, -0.09230769,\n", - " -0.07692308, -0.06153846, -0.04615385, -0.03076923, -0.01538462,\n", - " 0. , 0.01538462, 0.03076923, 0.04615385, 0.06153846,\n", - " 0.07692308, 0.09230769, 0.10769231, 0.12307692, 0.13846154,\n", - " 0.15384615, 0.16923077, 0.18461538, 0.2 , 0.21538462,\n", - " 0.23076923, 0.24615385, 0.26153846, 0.27692308, 0.29230769,\n", - " 0.30769231, 0.32307692, 0.33846154, 0.35384615, 0.36923077,\n", - " 0.38461538, 0.4 , 0.41538462, 0.43076923, 0.44615385,\n", - " 0.46153846, 0.47692308, 0.49230769, 0.50769231, 0.52307692,\n", - " 0.53846154, 0.55384615, 0.56923077, 0.58461538, 0.6 ,\n", - " 0.61538462, 0.63076923, 0.64615385, 0.66153846, 0.67692308,\n", - " 0.69230769, 0.70769231, 0.72307692, 0.73846154, 0.75384615,\n", - " 0.76923077, 0.78461538, 0.8 , 0.81538462, 0.83076923,\n", - " 0.84615385, 0.86153846, 0.87692308, 0.89230769, 0.90769231,\n", - " 0.92307692, 0.93846154, 0.95384615, 0.96923077, 0.98461538]), 'GS_dim': 1.0, 'GS_disp_update': 'Each_Accum', 'GS_online_reco': 'Yes', 'GS_reco_display': 'Yes', 'GS_typ': 'Spectrometer_Parameters', 'GS_info_dig_filling': 'Yes', 'GS_info_normalized_area': 'No_info', 'GS_info_max_point': 'No_info', 'GS_get_info_points': 'No_info', 'GS_continue': 'Exit_gsauto', 'GO_init_files': 'No', 'GO_data_save': 'Yes', 'GO_block_size': 'Standard_KBlock_Format', 'GO_raw_data_format': 'GO_32BIT_SGN_INT', 'GO_disp_update': 'Each_Accum', 'GO_online_reco': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'GO_time_est': 'Yes', 'GO_use_macro': 'No', 'GO_macro': '', 'END': ''}, 'method': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'Method': 'RARE', 'EchoTime': 5.33333333333333, 'EffectiveTE': 10.6666666666667, 'RareFactor': 4.0, 'RepetitionTime': 500.0, 'NAverages': 2.0, 'NRepetitions': 1.0, 'NEchoImages': 1.0, 'ScanTimeStr': '1h28m50s0ms', 'RfcFlipAngle': 180.0, 'DeriveGains': 'Yes', 'SliceBandWidthScale': 85.0, 'ExcPulseEnum': 'hermite', 'ExcPulse': '1 5400 90 7.89938145571436 100 0 100 LIB_EXCITATION', 'RefPulseEnum': 'hermite', 'RefPulse': '.633333333333333, 5400, 180, -2.08857153290193, 100, 0, 100,LIB_REFOCUS, , 3420, 0.1794, 0, 0.1024, conventional', 'GradCalConst': 63659.6, 'Nucleus1Enum': '1H', 'Nucleus1': '1H', 'RefAttMod1': 'AutoAdj', 'RefAttCh1': 22.8229326815529, 'RefAttStat1': '(Adj by AdjRefG (protocol ADJ_REFG))', 'Nucleus2Enum': '31P', 'Nucleus2': '', 'Nucleus3Enum': '1H', 'Nucleus4Enum': '1H', 'Nucleus5Enum': '1H', 'Nucleus6Enum': '1H', 'Nucleus7Enum': '1H', 'Nucleus8Enum': '1H', 'EncUseMultiRec': 'No', 'EncActReceivers': 'On', 'EncZfRead': 1.0, 'EncPpiAccel1': 1.0, 'EncPpiRefLines1': 0.0, 'EncPftAccel1': 1.0, 'EncZfAccel1': 1.0, 'EncZfAccel2': 1.0, 'EncOrder1': 'LINEAR_ENC', 'EncOrder2': 'LINEAR_ENC', 'EncStart1': -1.0, 'EncStart2': -1.0, 'EncMatrix': array([400., 164., 130.]), 'EncSteps1': array([-62., -21., 20., 61., -61., -20., 21., 62., -60., -19., 22.,\n", - " 63., -59., -18., 23., 64., -58., -17., 24., 65., -57., -16.,\n", - " 25., 66., -56., -15., 26., 67., -55., -14., 27., 68., -54.,\n", - " -13., 28., 69., -53., -12., 29., 70., -52., -11., 30., 71.,\n", - " -51., -10., 31., 72., -50., -9., 32., 73., -49., -8., 33.,\n", - " 74., -48., -7., 34., 75., -47., -6., 35., 76., -46., -5.,\n", - " 36., 77., -45., -4., 37., 78., -44., -3., 38., 79., -43.,\n", - " -2., 39., 80., -42., -1., 40., 81., -41., 0., 41., -82.,\n", - " -40., 1., 42., -81., -39., 2., 43., -80., -38., 3., 44.,\n", - " -79., -37., 4., 45., -78., -36., 5., 46., -77., -35., 6.,\n", - " 47., -76., -34., 7., 48., -75., -33., 8., 49., -74., -32.,\n", - " 9., 50., -73., -31., 10., 51., -72., -30., 11., 52., -71.,\n", - " -29., 12., 53., -70., -28., 13., 54., -69., -27., 14., 55.,\n", - " -68., -26., 15., 56., -67., -25., 16., 57., -66., -24., 17.,\n", - " 58., -65., -23., 18., 59., -64., -22., 19., 60., -63.]), 'EncSteps2': array([-65., -64., -63., -62., -61., -60., -59., -58., -57., -56., -55.,\n", - " -54., -53., -52., -51., -50., -49., -48., -47., -46., -45., -44.,\n", - " -43., -42., -41., -40., -39., -38., -37., -36., -35., -34., -33.,\n", - " -32., -31., -30., -29., -28., -27., -26., -25., -24., -23., -22.,\n", - " -21., -20., -19., -18., -17., -16., -15., -14., -13., -12., -11.,\n", - " -10., -9., -8., -7., -6., -5., -4., -3., -2., -1., 0.,\n", - " 1., 2., 3., 4., 5., 6., 7., 8., 9., 10., 11.,\n", - " 12., 13., 14., 15., 16., 17., 18., 19., 20., 21., 22.,\n", - " 23., 24., 25., 26., 27., 28., 29., 30., 31., 32., 33.,\n", - " 34., 35., 36., 37., 38., 39., 40., 41., 42., 43., 44.,\n", - " 45., 46., 47., 48., 49., 50., 51., 52., 53., 54., 55.,\n", - " 56., 57., 58., 59., 60., 61., 62., 63., 64.]), 'EncCentralStep1': 2.0, 'EncCentralStep2': 1.0, 'EncTotalAccel': 1.01219512195122, 'EncNReceivers': 1.0, 'EncAvailReceivers': 2.0, 'EncChanScaling': 1.0, 'OperationMode': '[1H] TX/RX Volume', 'EffSWh': 100000.0, 'ReadDephaseTime': 0.75, '2dPhaseGradientTime': 0.75, 'MinEchoTime': 5.33333333333333, 'SliceSpoilerDuration': 0.5, 'SliceSpoilerStrength': 15.0, 'RepetitionSpoilerDuration': 2.0, 'RepetitionSpoilerStrength': 7.0, 'DigAutSet': 'Yes', 'DigQuad': 'Yes', 'DigFilter': 'Digital_Sharp', 'DigRes': 20.0, 'DigDw': 0.005, 'DigSw': 200000.0, 'DigNp': 400.0, 'DigShift': 68.0, 'DigGroupDel': 0.34, 'DigDur': 2.0, 'DigEndDelMin': 0.0499999999999998, 'DigEndDelOpt': 0.1588, 'GeoMode': 'GeoImaging', 'SpatDimEnum': '3D', 'Isotropic': 'Isotropic_None', 'Fov': array([20., 14., 13.]), 'FovCm': array([2. , 1.4, 1.3]), 'SpatResol': array([0.1, 0.1, 0.1]), 'Matrix': array([200., 140., 130.]), 'MinMatrix': array([32., 32., 8.]), 'MaxMatrix': array([2048., 2048., 256.]), 'AntiAlias': array([2. , 1.18571429, 1. ]), 'MaxAntiAlias': array([2. , 8. , 4.60872011]), 'SliceThick': 13.0, 'ObjOrderScheme': 'Interlaced', 'ObjOrderList': 0.0, 'NSPacks': 1.0, 'SPackArrNSlices': 1.0, 'MajSliceOri': 'No', 'SPackArrSliceOrient': 'coronal', 'SPackArrReadOrient': 'H_F', 'SPackArrReadOffset': -2.1, 'SPackArrPhase1Offset': -0.9, 'SPackArrPhase2Offset': 0.0, 'SPackArrSliceOffset': 0.6, 'SPackArrSliceGapMode': 'non_contiguous', 'SPackArrSliceGap': -12.0, 'SPackArrSliceDistance': 1.0, 'SPackArrGradOrient': array([[[-0., -0., 1.],\n", - " [ 1., -0., 0.],\n", - " [ 0., 1., 0.]]]), 'NDummyScans': 2.0, 'TriggerModule': 'Off', 'EvolutionOnOff': 'Off', 'SelIrOnOff': 'Off', 'BlBloodOnOff': 'Off', 'FatSupOnOff': 'On', 'FatSupprPulseEnum': 'gauss512', 'FatSupprPulse': '.30464596458405, 2100.18662102985, 90,17.4951879761457, 100, 0, 100, LIB_EXCITATION, , 2740, 0.4150688, 50, 0.0512, conventional', 'FatSupDeriveGainMode': 'By_DeriveGains', 'FatSupBandWidth': 2100.18662102985, 'FatSupSpoilTime': 2.0, 'FatSupSpoilGrad': 20.0, 'FatSupModuleTime': 4.50464596458405, 'FatSupFL': -2099.19505344056, 'FsD0': 0.0001, 'FsD1': 1e-05, 'FsD2': 0.002, 'FsP0': 1304.64596458405, 'MagTransOnOff': 'Off', 'FovSatOnOff': 'On', 'FovSatNSlices': 3.0, 'FovSatSliceOrient': 'coronal sagittal sagittal', 'FovSatThick': array([15. , 10.74354067, 10.21913876]), 'FovSatOffset': array([-13.2 , -13.3 , 11.20023923]), 'FovSatSliceVec': array([[0.000000e+00, 1.000000e+00, 6.123234e-17],\n", - " [1.000000e+00, 0.000000e+00, 0.000000e+00],\n", - " [1.000000e+00, 0.000000e+00, 0.000000e+00]]), 'SatSlicesPulseEnum': 'hermite', 'SatSlicesPulse': ', 5400, 90, 7.89938145571436, 100, 0, 100,LIB_EXCITATION, , 5400, 0.1794, 50, 0.1024, conventional', 'SatSlicesDeriveGainMode': 'By_DeriveGains', 'FovSatGrad': array([[0.00000000e+00, 5.65507795e-03, 3.46273655e-19],\n", - " [7.89555062e-03, 0.00000000e+00, 0.00000000e+00],\n", - " [8.30071606e-03, 0.00000000e+00, 0.00000000e+00]]), 'FovSatSpoilTime': 2.0, 'FovSatSpoilGrad': 7.0, 'FovSatModuleTime': 9.7, 'FovSatFL': array([-4752. , -6684.94700276, 5918.43337391]), 'SatD0': 0.00015, 'SatD1': 1e-05, 'SatD2': 0.002, 'SatP0': 1000.0, 'SatLp0': 3.0, 'InFlowSatOnOff': 'Off', 'InFlowSatNSlices': 1.0, 'InFlowSatThick': 0.0, 'InFlowSatGap': 0.0, 'InFlowSatSide': 0.0, 'FlowSatPulse': '1 0.001 90 30 100 0 100 LIB_EXCITATION', 'FlowSatDeriveGainMode': 'By_DeriveGains', 'InFlowSatSpoilTime': 2.0, 'InFlowSatSpoilGrad': 20.0, 'InFlowSatModuleTime': 0.0, 'SfD0': 1e-06, 'SfD1': 1e-06, 'SfD2': 1e-06, 'SfP0': 10.0, 'SfLp0': 0.0, 'MotionSupOnOff': 'Off', 'FlipBackOnOff': 'Off', 'EchoTime1': 10.6666666666667, 'EchoTime2': 10.6666666666667, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_percentile': array([ 1. , 99.999]), 'RECO_map_error': 0.00025, 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'END': ''}, 'recons': {'1': {'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([400., 164., 130.]), 'RECO_ft_size': array([400., 166., 130.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([200., 140., 130.]), 'RECO_offset': array([[100.],\n", - " [ 13.],\n", - " [ 0.]]), 'RECO_regrid_mode': 'NO_REGRID', 'RECO_regrid_offset': 0.0, 'RECO_ramp_gap': 0.0, 'RECO_ramp_time': 0.0, 'RECO_ne_mode': 'NO_NAV_DATA', 'RECO_ne_dist': 'NeNoInterleave', 'RECO_ne_dens': 'NeCorrPerScan', 'RECO_ne_type': 'NAV_PHASE', 'RECO_ne_vals': array([[0., 0.]]), 'RECO_bc_mode': 'NO_BC NO_BC NO_BC', 'RECO_bc_start': array([300., 123., 98.]), 'RECO_bc_len': array([100., 41., 32.]), 'RECO_dc_offset': array([0., 0.]), 'RECO_dc_divisor': 1.0, 'RECO_bc_coroff': array([0., 0., 0.]), 'RECO_qopts': 'CONJ_AND_QNEG NO_QOPTS NO_QOPTS', 'RECO_wdw_mode': 'NO_WDW NO_WDW NO_WDW', 'RECO_lb': array([-0.5, -0.5, -0.5]), 'RECO_sw': array([2.e+05, 1.e+00, 1.e+00]), 'RECO_gb': array([0.5, 0.5, 0.5]), 'RECO_sbs': array([1., 1., 1.]), 'RECO_tm1': array([0.25, 0.25, 0.25]), 'RECO_tm2': array([0.75, 0.75, 0.75]), 'RECO_ft_mode': 'COMPLEX_FT COMPLEX_FT COMPLEX_FT', 'RECO_pc_mode': 'NO_PC NO_PC NO_PC', 'RECO_pc_lin': ['(0, 0)', '(0, 0)', '(0, 0)'], 'RECO_rotate': array([[0. ],\n", - " [0.44578313],\n", - " [0.45384615]]), 'RECO_ppc_mode': 'NO_PPC', 'RECO_ref_image': 0.0, 'RECO_nr_supports': 0.4, 'RECO_sig_threshold': 0.15, 'RECO_ppc_degree': 1.0, 'RECO_ppc_coeffs': array([[[0., 0.],\n", - " [0., 0.],\n", - " [0., 0.]]]), 'RECO_dc_elim': 'No', 'RECO_transposition': 1.0, 'RECO_image_type': 'MAGNITUDE_IMAGE', 'RECO_image_threshold': 0.15, 'RECO_ir_scale': 10.0, 'RECO_wordtype': '_16BIT_SGN_INT', 'RECO_map_mode': 'PERCENTILE_MAPPING', 'RECO_map_range': array([-2.14748365e+09, 2.14748365e+09]), 'RECO_map_percentile': array([ 1. , 99.999]), 'RECO_map_error': 0.00025, 'RECO_globex': 0.0, 'RECO_minima': 49.0, 'RECO_maxima': 32766.0, 'RECO_map_min': -13236953.9213779, 'RECO_map_max': 13236953.9213779, 'RECO_map_offset': 0.0, 'RECO_map_slope': 0.0024754183832556, 'RECO_byte_order': 'littleEndian', 'RECO_time': '11:27:33 21 Jul 2023', 'RECO_abs_time': 1689964053.0, 'RECO_base_image_uid': '2.16.756.5.5.100.380435303.14105.1689969391.16', 'GS_reco_display': 'Yes', 'GO_reco_display': 'Yes', 'GO_reco_each_nr': 'No', 'GO_max_reco_mem': 0.0, 'END': ''}, 'visu_pars': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'VisuVersion': 1.0, 'VisuUid': '2.16.756.5.5.100.380435303.14105.1689969391.16', 'VisuCreator': 'ParaVision', 'VisuCreatorVersion': '5.1', 'VisuCreationDate': '11:27:33 21 Jul 2023', 'VisuCoreFrameCount': 1.0, 'VisuCoreDim': 3.0, 'VisuCoreSize': array([140., 200., 130.]), 'VisuCoreDimDesc': 'spatial spatial spatial', 'VisuCoreExtent': array([14., 20., 13.]), 'VisuCoreFrameThickness': 13.0, 'VisuCoreUnits': ['mm', 'mm', 'mm'], 'VisuCoreOrientation': array([[ 1., 0., 0., 0., 0., -1., 0., 1., 0.]]), 'VisuCorePosition': array([[-6.1, -7. , 7.9]]), 'VisuCoreDataMin': 49.0, 'VisuCoreDataMax': 32766.0, 'VisuCoreDataOffs': 0.0, 'VisuCoreDataSlope': 403.972115083361, 'VisuCoreFrameType': 'MAGNITUDE_IMAGE', 'VisuCoreWordType': '_16BIT_SGN_INT', 'VisuCoreByteOrder': 'littleEndian', 'VisuCoreDiskSliceOrder': 'disk_reverse_slice_order', 'VisuSubjectName': 'DL_AI2', 'VisuSubjectId': 'DL_AI2', 'VisuSubjectBirthDate': '', 'VisuSubjectSex': 'FEMALE', 'VisuSubjectComment': 'DL_AI2', 'VisuStudyUid': '2.16.756.5.5.100.380435303.12267.1689961864.4394', 'VisuStudyDate': '11:51:04 21 Jul 2023', 'VisuStudyId': '684811_2023_07_21', 'VisuStudyNumber': 2.0, 'VisuSubjectWeight': 5.0, 'VisuStudyReferringPhysician': '', 'VisuStudyDescription': '684811_2023_07_21', 'VisuSeriesNumber': 458753.0, 'VisuSubjectPosition': 'Head_Supine', 'VisuSeriesTypeId': 'ACQ_BRUKER_PVM', 'VisuAcqSoftwareVersion': '5.1', 'VisuInstitution': 'University of Washington', 'VisuStation': 'spect', 'VisuAcqDate': '11:27:33 21 Jul 2023', 'VisuAcqEchoTrainLength': 4.0, 'VisuAcqSequenceName': '(RARE (pvm))', 'VisuAcqNumberOfAverages': 2.0, 'VisuAcqImagingFrequency': 599.486710243222, 'VisuAcqImagedNucleus': '1H', 'VisuAcqRepetitionTime': 500.0, 'VisuAcqPhaseEncSteps': 164.0, 'VisuAcqPixelBandwidth': 500.0, 'VisuAcqFlipAngle': 180.0, 'VisuAcqSize': array([164., 400., 130.]), 'VisuAcqImageSizeAccellerated': 'Yes', 'VisuAcqImagePhaseEncDir': 'row_slice_dir', 'VisuAcqEchoTime': 10.6666666666667, 'VisuAcquisitionProtocol': '07c_RARE_8_3D_T2w_cor', 'VisuAcqScanTime': 5330000.0, 'END': ''}}}}}\n", "['1', '2', '3', '4', '5', '6', '7']\n", "['1']\n", "{'reco': {'TITLE': 'Parameter List', 'JCAMPDX': 4.24, 'DATATYPE': 'Parameter Values', 'ORIGIN': 'Bruker BioSpin MRI GmbH', 'OWNER': 'dhlee', 'RECO_mode': 'FT_MODE', 'RecoAutoDerive': 'Yes', 'RECO_inp_order': 'NO_REORDERING', 'RECO_inp_size': array([400., 164., 130.]), 'RECO_ft_size': array([400., 166., 130.]), 'RECO_fov': array([2. , 1.4, 1.3]), 'RECO_size': array([200., 140., 130.]), 'RECO_offset': array([[100.],\n", @@ -1062,39 +55,36 @@ }, { "cell_type": "code", - "execution_count": 24, + "execution_count": 18, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "dict_keys(['acqp', 'method', 'recons'])\n", - "dict_keys(['TITLE', 'JCAMPDX', 'DATATYPE', 'ORIGIN', 'OWNER', 'Method', 'EchoTime', 'EffectiveTE', 'RareFactor', 'RepetitionTime', 'NAverages', 'NRepetitions', 'NEchoImages', 'ScanTimeStr', 'RfcFlipAngle', 'DeriveGains', 'SliceBandWidthScale', 'ExcPulseEnum', 'ExcPulse', 'RefPulseEnum', 'RefPulse', 'GradCalConst', 'Nucleus1Enum', 'Nucleus1', 'RefAttMod1', 'RefAttCh1', 'RefAttStat1', 'Nucleus2Enum', 'Nucleus2', 'Nucleus3Enum', 'Nucleus4Enum', 'Nucleus5Enum', 'Nucleus6Enum', 'Nucleus7Enum', 'Nucleus8Enum', 'EncUseMultiRec', 'EncActReceivers', 'EncZfRead', 'EncPpiAccel1', 'EncPpiRefLines1', 'EncPftAccel1', 'EncZfAccel1', 'EncZfAccel2', 'EncOrder1', 'EncOrder2', 'EncStart1', 'EncStart2', 'EncMatrix', 'EncSteps1', 'EncSteps2', 'EncCentralStep1', 'EncCentralStep2', 'EncTotalAccel', 'EncNReceivers', 'EncAvailReceivers', 'EncChanScaling', 'OperationMode', 'EffSWh', 'ReadDephaseTime', '2dPhaseGradientTime', 'MinEchoTime', 'SliceSpoilerDuration', 'SliceSpoilerStrength', 'RepetitionSpoilerDuration', 'RepetitionSpoilerStrength', 'DigAutSet', 'DigQuad', 'DigFilter', 'DigRes', 'DigDw', 'DigSw', 'DigNp', 'DigShift', 'DigGroupDel', 'DigDur', 'DigEndDelMin', 'DigEndDelOpt', 'GeoMode', 'SpatDimEnum', 'Isotropic', 'Fov', 'FovCm', 'SpatResol', 'Matrix', 'MinMatrix', 'MaxMatrix', 'AntiAlias', 'MaxAntiAlias', 'SliceThick', 'ObjOrderScheme', 'ObjOrderList', 'NSPacks', 'SPackArrNSlices', 'MajSliceOri', 'SPackArrSliceOrient', 'SPackArrReadOrient', 'SPackArrReadOffset', 'SPackArrPhase1Offset', 'SPackArrPhase2Offset', 'SPackArrSliceOffset', 'SPackArrSliceGapMode', 'SPackArrSliceGap', 'SPackArrSliceDistance', 'SPackArrGradOrient', 'NDummyScans', 'TriggerModule', 'EvolutionOnOff', 'SelIrOnOff', 'BlBloodOnOff', 'FatSupOnOff', 'FatSupprPulseEnum', 'FatSupprPulse', 'FatSupDeriveGainMode', 'FatSupBandWidth', 'FatSupSpoilTime', 'FatSupSpoilGrad', 'FatSupModuleTime', 'FatSupFL', 'FsD0', 'FsD1', 'FsD2', 'FsP0', 'MagTransOnOff', 'FovSatOnOff', 'FovSatNSlices', 'FovSatSliceOrient', 'FovSatThick', 'FovSatOffset', 'FovSatSliceVec', 'SatSlicesPulseEnum', 'SatSlicesPulse', 'SatSlicesDeriveGainMode', 'FovSatGrad', 'FovSatSpoilTime', 'FovSatSpoilGrad', 'FovSatModuleTime', 'FovSatFL', 'SatD0', 'SatD1', 'SatD2', 'SatP0', 'SatLp0', 'InFlowSatOnOff', 'InFlowSatNSlices', 'InFlowSatThick', 'InFlowSatGap', 'InFlowSatSide', 'FlowSatPulse', 'FlowSatDeriveGainMode', 'InFlowSatSpoilTime', 'InFlowSatSpoilGrad', 'InFlowSatModuleTime', 'SfD0', 'SfD1', 'SfD2', 'SfP0', 'SfLp0', 'MotionSupOnOff', 'FlipBackOnOff', 'EchoTime1', 'EchoTime2', 'RECO_wordtype', 'RECO_map_mode', 'RECO_map_percentile', 'RECO_map_error', 'RECO_map_range', 'END'])\n", - "RARE\n", - "5.33333333333333\n", - "10.6666666666667\n", - "4.0\n", - "500.0\n" + "[0.1 0.1 0.1]\n", + "\n" ] } ], "source": [ "# Checking Method Fields\n", + "cur_method = metadata.scan_data['7']['method']\n", "\n", - "print(metadata.scan_data['7'].keys())\n", - "print(self.cur_method.keys())\n", - "print(self.cur_method['Method'])\n", - "print(self.cur_method['EchoTime'])\n", - "print(self.cur_method['EffectiveTE'])\n", - "print(self.cur_method['RareFactor'])\n", - "print(self.cur_method['RepetitionTime'])\n", - "print(self.cur_method['SpatResol'])" + "# print(metadata.scan_data['7'].keys())\n", + "# print(self.cur_method.keys())\n", + "# print(self.cur_method['Method'])\n", + "# print(self.cur_method['EchoTime'])\n", + "# print(self.cur_method['EffectiveTE'])\n", + "# print(self.cur_method['RareFactor'])\n", + "# print(self.cur_method['RepetitionTime'])\n", + "print(cur_method['SpatResol'])\n", + "print(type(cur_method['SpatResol'][0]))" ] }, { "cell_type": "code", - "execution_count": 37, + "execution_count": 4, "metadata": {}, "outputs": [ { @@ -1121,18 +111,9 @@ }, { "cell_type": "code", - "execution_count": 6, + "execution_count": 5, "metadata": {}, - "outputs": [ - { - "ename": "SyntaxError", - "evalue": "invalid syntax (721329819.py, line 24)", - "output_type": "error", - "traceback": [ - "\u001b[1;36m Cell \u001b[1;32mIn[6], line 24\u001b[1;36m\u001b[0m\n\u001b[1;33m scan_index=,\u001b[0m\n\u001b[1;37m ^\u001b[0m\n\u001b[1;31mSyntaxError\u001b[0m\u001b[1;31m:\u001b[0m invalid syntax\n" - ] - } - ], + "outputs": [], "source": [ "from aind_data_schema.core.mri_session import MRIScan, MriScanSequence, ScanType, SubjectPosition\n", "from decimal import Decimal\n", @@ -1160,7 +141,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 25, "metadata": {}, "outputs": [], "source": [ @@ -1181,6 +162,12 @@ " self.cur_visu_pars = self.metadata.scan_data[scan_index]['recons']['1']['visu_pars']\n", " self.cur_method = self.metadata.scan_data[scan_index]['method']\n", "\n", + " subj_pos = self.metadata.subject_data[\"SUBJECT_position\"]\n", + " if 'supine' in subj_pos.lower():\n", + " subj_pos = 'Supine'\n", + " elif 'prone' in subj_pos.lower():\n", + " subj_pos = 'Prone'\n", + "\n", " return MRIScan(\n", " scan_index=scan_index,\n", " scan_type=ScanType(scan_type), # set by scientists\n", @@ -1189,13 +176,13 @@ " rare_factor=self.cur_method['RareFactor'], # method ##$PVM_RareFactor=8,\n", " echo_time=self.cur_method['EchoTime'], # method ##$PVM_EchoTime=0.01,\n", " effective_echo_time=Decimal(self.cur_method['EffectiveTE']), # method ##$EffectiveTE=(1)\n", - " echo_time_unit=TimeUnit(), # what do we want here?\n", + " # echo_time_unit=TimeUnit(), # what do we want here?\n", " repetition_time=self.cur_method['RepetitionTime'], # method ##$PVM_RepetitionTime=500,\n", - " repetition_time_unit=TimeUnit(), # ditto\n", - " vc_orientation=Rotation3dTransform(rotation=self.cur_visu_pars['VisuCoreOrientation']),# visu_pars ##$VisuCoreOrientation=( 1, 9 )\n", - " vc_position=Translation3dTransform(translation=self.cur_visu_pars['VisuCorePosition']), # visu_pars ##$VisuCorePosition=( 1, 3 )\n", - " subject_position=SubjectPosition(self.metadata.subject_data[\"SUBJECT_position\"]), # subject ##$SUBJECT_position=SUBJ_POS_Supine,\n", - " vozel_sizes=Scale3dTransform(self.cur_method['SpatResol']), # method ##$PVM_SpatResol=( 3 )\n", + " # repetition_time_unit=TimeUnit(), # ditto\n", + " vc_orientation=Rotation3dTransform(rotation=list(*self.cur_visu_pars['VisuCoreOrientation'])),# visu_pars ##$VisuCoreOrientation=( 1, 9 )\n", + " vc_position=Translation3dTransform(translation=list(*self.cur_visu_pars['VisuCorePosition'])), # visu_pars ##$VisuCorePosition=( 1, 3 )\n", + " subject_position=SubjectPosition(subj_pos), # subject ##$SUBJECT_position=SUBJ_POS_Supine,\n", + " voxel_sizes=Scale3dTransform(scale=self.cur_method['SpatResol']), # method ##$PVM_SpatResol=( 3 )\n", " processing_steps=[],\n", " additional_scan_parameters={},\n", " notes=\"\", # Where should we pull these?\n", @@ -1204,19 +191,29 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 26, "metadata": {}, - "outputs": [], - "source": [] + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "scan_index=7 scan_type='3D Scan' primary_scan=True scan_sequence_type='RARE' rare_factor=4 echo_time=Decimal('5.33333333333333') effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125') echo_time_unit= repetition_time=Decimal('500.0') repetition_time_unit= vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]) vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.0'), Decimal('7.9')]) subject_position='Supine' voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.1'), Decimal('0.1'), Decimal('0.1')]) processing_steps=[] additional_scan_parameters={} notes=''\n" + ] + } + ], + "source": [ + "loader = MRILoader(path)\n", + "scan7 = loader.make_model_from_scan('7', '3D Scan', True)\n", + "print(scan7)" + ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], - "source": [ - "loader = MRILoader(path)" - ] + "source": [] } ], "metadata": { From 81f2672863f2e48b68a37a4c8131ab1810e267e3 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Mon, 4 Mar 2024 15:38:07 -0500 Subject: [PATCH 05/43] Update scratch.ipynb --- scripts/MRI_ingest/scratch.ipynb | 255 +++++++++++++++++++++++++++---- 1 file changed, 226 insertions(+), 29 deletions(-) diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb index 2c489e14..d99e18c7 100644 --- a/scripts/MRI_ingest/scratch.ipynb +++ b/scripts/MRI_ingest/scratch.ipynb @@ -8,13 +8,38 @@ "source": [ "from bruker2nifti._metadata import BrukerMetadata\n", "from pathlib import Path\n", - "from aind_data_schema.models.coordinates import Rotation3dTransform, Scale3dTransform, Translation3dTransform\n" + "from aind_data_schema.models.coordinates import Rotation3dTransform, Scale3dTransform, Translation3dTransform\n", + "\n", + "import logging\n", + "import numpy as np\n", + "\n", + "from datetime import datetime" ] }, { "cell_type": "code", "execution_count": 2, "metadata": {}, + "outputs": [], + "source": [ + "log_file_name = \"./log_files/log_\" + datetime.now().strftime(\"%Y%m%d_%H%M%S\") + \".log\"\n", + "logger = logging.getLogger()\n", + "logger.setLevel(logging.DEBUG)\n", + "# create file handler which logs even debug messages\n", + "fh = logging.FileHandler(log_file_name, 'w', 'utf-8')\n", + "fh.setLevel(logging.DEBUG)\n", + "\n", + "# create formatter and add it to the handlers\n", + "formatter = logging.Formatter('%(asctime)s - %(name)s - %(levelname)s - %(message)s')\n", + "fh.setFormatter(formatter)\n", + "# add the handlers to logger\n", + "logger.addHandler(fh)" + ] + }, + { + "cell_type": "code", + "execution_count": 3, + "metadata": {}, "outputs": [ { "name": "stdout", @@ -55,13 +80,14 @@ }, { "cell_type": "code", - "execution_count": 18, + "execution_count": 4, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ + "RARE\n", "[0.1 0.1 0.1]\n", "\n" ] @@ -73,7 +99,7 @@ "\n", "# print(metadata.scan_data['7'].keys())\n", "# print(self.cur_method.keys())\n", - "# print(self.cur_method['Method'])\n", + "print(cur_method['Method'])\n", "# print(self.cur_method['EchoTime'])\n", "# print(self.cur_method['EffectiveTE'])\n", "# print(self.cur_method['RareFactor'])\n", @@ -84,7 +110,7 @@ }, { "cell_type": "code", - "execution_count": 4, + "execution_count": 5, "metadata": {}, "outputs": [ { @@ -111,7 +137,7 @@ }, { "cell_type": "code", - "execution_count": 5, + "execution_count": 6, "metadata": {}, "outputs": [], "source": [ @@ -141,73 +167,244 @@ }, { "cell_type": "code", - "execution_count": 25, + "execution_count": 7, "metadata": {}, "outputs": [], "source": [ "from bruker2nifti._metadata import BrukerMetadata\n", "from pathlib import Path\n", "from aind_data_schema.models.coordinates import Rotation3dTransform, Scale3dTransform, Translation3dTransform\n", - "from aind_data_schema.core.mri_session import MRIScan, MriScanSequence, ScanType, SubjectPosition\n", + "from aind_data_schema.core.mri_session import MRIScan, MriSession, MriScanSequence, ScanType, SubjectPosition\n", "from decimal import Decimal\n", "from aind_data_schema.models.units import MassUnit, TimeUnit\n", + "from aind_data_schema.models.devices import Scanner, ScannerLocation, MagneticStrength\n", + "from datetime import datetime\n", + "\n", + "import traceback\n", + "\n", "\n", "class MRILoader:\n", " def __init__(self, data_path):\n", " self.metadata = BrukerMetadata(path)\n", " self.metadata.parse_scans()\n", " self.metadata.parse_subject()\n", + " self.n_scans = self.metadata.list_scans()\n", + "\n", + "\n", + " def load_mri_session(self, experimenter: str, primary_scan_number: str, setup_scan_number: str, scan_location: ScannerLocation, magnet_strength: MagneticStrength) -> MRIScan:\n", + "\n", + " scans = []\n", + " for scan in self.n_scans:\n", + " scan_data = self.metadata.read_scan(scan)\n", + " scan_type = \"3D Scan\"\n", + " if scan == setup_scan_number:\n", + " scan_type = \"Set Up\"\n", + " primary_scan = False\n", + " if scan == primary_scan_number:\n", + " primary_scan = True\n", + " scans.append(self.make_model_from_scan(scan, scan_type, primary_scan))\n", + "\n", + " return MriSession(\n", + "\n", + " subject_id=\"\",\n", + " session_start_time=datetime.now(), \n", + " session_end_time=datetime.now(),\n", + " experimenter_full_name=experimenter, \n", + " protocol_id=\"\",\n", + " iacuc_protocol=\"\",\n", + " # animal_weight_prior=,\n", + " # animal_weight_post=,\n", + " # weight_unit=, \n", + " # anaesthesia=,\n", + " mri_scanner=Scanner(\n", + " name=\"test_scanner\",\n", + " scanner_location=scan_location,\n", + " magnetic_strength=magnet_strength, \n", + " magnetic_strength_unit=\"T\", \n", + " ),\n", + " scans=scans,\n", + " notes=\"none\"\n", + " )\n", + " \n", "\n", " def make_model_from_scan(self, scan_index: str, scan_type, primary_scan: bool) -> MRIScan:\n", + " print(f'loading scan {scan_index}')\n", + " print(f'{self.metadata.read_scan(scan_index).keys()}')\n", + " \n", + "\n", + " \n", " self.cur_visu_pars = self.metadata.scan_data[scan_index]['recons']['1']['visu_pars']\n", " self.cur_method = self.metadata.scan_data[scan_index]['method']\n", "\n", + "\n", + " print(self.metadata.scan_data[scan_index].keys())\n", + " print(self.cur_method['EchoTime'])\n", " subj_pos = self.metadata.subject_data[\"SUBJECT_position\"]\n", " if 'supine' in subj_pos.lower():\n", " subj_pos = 'Supine'\n", " elif 'prone' in subj_pos.lower():\n", " subj_pos = 'Prone'\n", "\n", - " return MRIScan(\n", - " scan_index=scan_index,\n", - " scan_type=ScanType(scan_type), # set by scientists\n", - " primary_scan=primary_scan, # set by scientists\n", - " scan_sequence_type=MriScanSequence(self.cur_method['Method']), # method ##$Method=RARE,\n", - " rare_factor=self.cur_method['RareFactor'], # method ##$PVM_RareFactor=8,\n", - " echo_time=self.cur_method['EchoTime'], # method ##$PVM_EchoTime=0.01,\n", - " effective_echo_time=Decimal(self.cur_method['EffectiveTE']), # method ##$EffectiveTE=(1)\n", - " # echo_time_unit=TimeUnit(), # what do we want here?\n", - " repetition_time=self.cur_method['RepetitionTime'], # method ##$PVM_RepetitionTime=500,\n", - " # repetition_time_unit=TimeUnit(), # ditto\n", - " vc_orientation=Rotation3dTransform(rotation=list(*self.cur_visu_pars['VisuCoreOrientation'])),# visu_pars ##$VisuCoreOrientation=( 1, 9 )\n", - " vc_position=Translation3dTransform(translation=list(*self.cur_visu_pars['VisuCorePosition'])), # visu_pars ##$VisuCorePosition=( 1, 3 )\n", - " subject_position=SubjectPosition(subj_pos), # subject ##$SUBJECT_position=SUBJ_POS_Supine,\n", - " voxel_sizes=Scale3dTransform(scale=self.cur_method['SpatResol']), # method ##$PVM_SpatResol=( 3 )\n", - " processing_steps=[],\n", - " additional_scan_parameters={},\n", - " notes=\"\", # Where should we pull these?\n", - " ) " + " scan_sequence = MriScanSequence.OTHER\n", + " if 'RARE' in self.cur_method['Method']:\n", + " scan_sequence = MriScanSequence(self.cur_method['Method'])\n", + "\n", + " rare_factor = None\n", + " if 'RareFactor' in self.cur_method.keys():\n", + " rare_factor = self.cur_method['RareFactor']\n", + "\n", + " print(f'orientation: {self.cur_visu_pars[\"VisuCoreOrientation\"]}')\n", + " print(f'position: {self.cur_visu_pars[\"VisuCorePosition\"]}')\n", + "\n", + " rotation=list(*self.cur_visu_pars['VisuCoreOrientation'])\n", + " if isinstance(rotation, np.ndarray):\n", + " rotation = rotation.tolist()\n", + " translation=list(*self.cur_visu_pars['VisuCorePosition'])\n", + " if isinstance(translation, np.ndarray):\n", + " translation = translation.tolist()\n", + "\n", + " try:\n", + " return MRIScan(\n", + " scan_index=scan_index,\n", + " scan_type=ScanType(scan_type), # set by scientists\n", + " primary_scan=primary_scan, # set by scientists\n", + " scan_sequence_type=scan_sequence, # method ##$Method=RARE,\n", + " rare_factor=rare_factor, # method ##$PVM_RareFactor=8,\n", + " echo_time=self.cur_method['EchoTime'], # method ##$PVM_EchoTime=0.01,\n", + " effective_echo_time=Decimal(self.cur_method['EffectiveTE']), # method ##$EffectiveTE=(1)\n", + " # echo_time_unit=TimeUnit(), # what do we want here?\n", + " repetition_time=self.cur_method['RepetitionTime'], # method ##$PVM_RepetitionTime=500,\n", + " # repetition_time_unit=TimeUnit(), # ditto\n", + " vc_orientation=Rotation3dTransform(rotation=rotation),# visu_pars ##$VisuCoreOrientation=( 1, 9 )\n", + " vc_position=Translation3dTransform(translation=translation), # visu_pars ##$VisuCorePosition=( 1, 3 )\n", + " subject_position=SubjectPosition(subj_pos), # subject ##$SUBJECT_position=SUBJ_POS_Supine,\n", + " voxel_sizes=Scale3dTransform(scale=self.cur_method['SpatResol']), # method ##$PVM_SpatResol=( 3 )\n", + " processing_steps=[],\n", + " additional_scan_parameters={},\n", + " notes=\"\", # Where should we pull these?\n", + " ) \n", + " except Exception as e:\n", + " print(traceback.format_exc())\n", + " logging.error(f'Error loading scan {scan_index}: {e}') " ] }, { "cell_type": "code", - "execution_count": 26, + "execution_count": 8, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "scan_index=7 scan_type='3D Scan' primary_scan=True scan_sequence_type='RARE' rare_factor=4 echo_time=Decimal('5.33333333333333') effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125') echo_time_unit= repetition_time=Decimal('500.0') repetition_time_unit= vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]) vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.0'), Decimal('7.9')]) subject_position='Supine' voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.1'), Decimal('0.1'), Decimal('0.1')]) processing_steps=[] additional_scan_parameters={} notes=''\n" + "loading scan 5\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "5.33333333333333\n", + "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", + "position: [[-6.1 -7.1 8.1]]\n", + "scan_index=5 scan_type='3D Scan' primary_scan=True scan_sequence_type='RARE' rare_factor=4 echo_time=Decimal('5.33333333333333') effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125') echo_time_unit= repetition_time=Decimal('500.0') repetition_time_unit= vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]) vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('8.1')]) subject_position='Supine' voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]) processing_steps=[] additional_scan_parameters=AindGeneric() notes=''\n" ] } ], "source": [ "loader = MRILoader(path)\n", - "scan7 = loader.make_model_from_scan('7', '3D Scan', True)\n", + "scan7 = loader.make_model_from_scan('5', '3D Scan', True)\n", "print(scan7)" ] }, + { + "cell_type": "code", + "execution_count": 9, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "probes1\n" + ] + }, + { + "ename": "TypeError", + "evalue": "'str' object does not support item assignment", + "output_type": "error", + "traceback": [ + "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", + "\u001b[1;31mTypeError\u001b[0m Traceback (most recent call last)", + "Cell \u001b[1;32mIn[9], line 16\u001b[0m\n\u001b[0;32m 14\u001b[0m \u001b[38;5;28;01mfor\u001b[39;00m probe \u001b[38;5;129;01min\u001b[39;00m stuff:\n\u001b[0;32m 15\u001b[0m \u001b[38;5;28mprint\u001b[39m(probe)\n\u001b[1;32m---> 16\u001b[0m probe[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mto_replace\u001b[39m\u001b[38;5;124m'\u001b[39m] \u001b[38;5;241m=\u001b[39m \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mreplaced\u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 18\u001b[0m \u001b[38;5;28mprint\u001b[39m(stuff)\n", + "\u001b[1;31mTypeError\u001b[0m: 'str' object does not support item assignment" + ] + } + ], + "source": [ + "stuff = {\n", + " 'probes1': {\n", + " 'name': \"name\",\n", + " 'item_type': \"type\",\n", + " 'to_replace': \"to_replace\",\n", + " },\n", + " 'probes2': {\n", + " 'name': \"name\",\n", + " 'item_type': \"type\",\n", + " 'to_replace': \"to_replace\",\n", + " } \n", + "}\n", + "\n", + "for probe in stuff:\n", + " print(probe)\n", + " probe['to_replace'] = \"replaced\"\n", + "\n", + "print(stuff)\n", + "\n" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "loading scan 1\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "3.42\n", + "orientation: [[ 1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [ 0. 1. 0. 0. 0. -1. -1. 0. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", + "position: [[-15. -15. 0.]\n", + " [ 0. -15. 15.]\n", + " [-15. 0. 15.]]\n" + ] + }, + { + "ename": "TypeError", + "evalue": "list expected at most 1 argument, got 3", + "output_type": "error", + "traceback": [ + "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", + "\u001b[1;31mTypeError\u001b[0m Traceback (most recent call last)", + "Cell \u001b[1;32mIn[10], line 1\u001b[0m\n\u001b[1;32m----> 1\u001b[0m session \u001b[38;5;241m=\u001b[39m loader\u001b[38;5;241m.\u001b[39mload_mri_session([\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mMae\u001b[39m\u001b[38;5;124m\"\u001b[39m], \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m7\u001b[39m\u001b[38;5;124m\"\u001b[39m, \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m1\u001b[39m\u001b[38;5;124m\"\u001b[39m, ScannerLocation\u001b[38;5;241m.\u001b[39mFRED_HUTCH, MagneticStrength\u001b[38;5;241m.\u001b[39mMRI_7T)\n", + "Cell \u001b[1;32mIn[7], line 32\u001b[0m, in \u001b[0;36mMRILoader.load_mri_session\u001b[1;34m(self, experimenter, primary_scan_number, setup_scan_number, scan_location, magnet_strength)\u001b[0m\n\u001b[0;32m 30\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m scan \u001b[38;5;241m==\u001b[39m primary_scan_number:\n\u001b[0;32m 31\u001b[0m primary_scan \u001b[38;5;241m=\u001b[39m \u001b[38;5;28;01mTrue\u001b[39;00m\n\u001b[1;32m---> 32\u001b[0m scans\u001b[38;5;241m.\u001b[39mappend(\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mmake_model_from_scan(scan, scan_type, primary_scan))\n\u001b[0;32m 34\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m MriSession(\n\u001b[0;32m 35\u001b[0m \n\u001b[0;32m 36\u001b[0m subject_id\u001b[38;5;241m=\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m\"\u001b[39m,\n\u001b[1;32m (...)\u001b[0m\n\u001b[0;32m 53\u001b[0m notes\u001b[38;5;241m=\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mnone\u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 54\u001b[0m )\n", + "Cell \u001b[1;32mIn[7], line 86\u001b[0m, in \u001b[0;36mMRILoader.make_model_from_scan\u001b[1;34m(self, scan_index, scan_type, primary_scan)\u001b[0m\n\u001b[0;32m 83\u001b[0m \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124mf\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124morientation: \u001b[39m\u001b[38;5;132;01m{\u001b[39;00m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mcur_visu_pars[\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mVisuCoreOrientation\u001b[39m\u001b[38;5;124m\"\u001b[39m]\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m'\u001b[39m)\n\u001b[0;32m 84\u001b[0m \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124mf\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mposition: \u001b[39m\u001b[38;5;132;01m{\u001b[39;00m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mcur_visu_pars[\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mVisuCorePosition\u001b[39m\u001b[38;5;124m\"\u001b[39m]\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m'\u001b[39m)\n\u001b[1;32m---> 86\u001b[0m rotation\u001b[38;5;241m=\u001b[39m\u001b[38;5;28mlist\u001b[39m(\u001b[38;5;241m*\u001b[39m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mcur_visu_pars[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mVisuCoreOrientation\u001b[39m\u001b[38;5;124m'\u001b[39m])\n\u001b[0;32m 87\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28misinstance\u001b[39m(rotation, np\u001b[38;5;241m.\u001b[39mndarray):\n\u001b[0;32m 88\u001b[0m rotation \u001b[38;5;241m=\u001b[39m rotation\u001b[38;5;241m.\u001b[39mtolist()\n", + "\u001b[1;31mTypeError\u001b[0m: list expected at most 1 argument, got 3" + ] + } + ], + "source": [ + "session = loader.load_mri_session([\"Mae\"], \"7\", \"1\", ScannerLocation.FRED_HUTCH, MagneticStrength.MRI_7T)" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] + }, { "cell_type": "code", "execution_count": null, From 3f301a6853228082b0fcafc966b34ac48d3d76ee Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Mon, 4 Mar 2024 15:55:55 -0500 Subject: [PATCH 06/43] Update .gitignore --- .gitignore | 1 + 1 file changed, 1 insertion(+) diff --git a/.gitignore b/.gitignore index 06a56dd9..11115364 100644 --- a/.gitignore +++ b/.gitignore @@ -26,6 +26,7 @@ share/python-wheels/ .installed.cfg *.egg MANIFEST +scripts/MRI_ingest # PyInstaller # Usually these files are written by a python script from a template From 054a01db54be06a879de307cabc891075e80a3c5 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Mon, 4 Mar 2024 17:23:44 -0500 Subject: [PATCH 07/43] initial commit --- .../Exaspim_ingest/ExM Sample Tracking.xlsx | Bin 0 -> 48230 bytes scripts/Exaspim_ingest/ingest_exaspim.ipynb | 528 ++++++++++++++++++ .../original_spec_files/576404_invalid.json | 1 + .../original_spec_files/603033_invalid.json | 1 + .../original_spec_files/609105_invalid.json | 1 + .../original_spec_files/609107_invalid.json | 1 + .../original_spec_files/609281_invalid.json | 1 + 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}, + { + "cell_type": "code", + "execution_count": 6, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "576404\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'576404'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "609105\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609105'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "609107\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609107'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "609281\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609281'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "614978\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'614978'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "614980\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'614980'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "615296\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'615296'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "603033\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'603033'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "618584\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'618584'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "146\n", + "620631\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'620631'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "620629\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'620629'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648860\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648860'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648861\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648861'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648858\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648858'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648862\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648862'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648077\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648077'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648079\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648079'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648698\n" + ] + } + ], + "source": [ + "subj_procedures = {}\n", + "\n", + "download_files = True\n", + "\n", + "\n", + "if download_files:\n", + " for row_idx, row in base.iterrows(): \n", + "\n", + " sample_id = str(row['Sample']['Unnamed: 4_level_1']['Unnamed: 4_level_2'])\n", + " print(sample_id)\n", + " \n", + " if len(sample_id) != 6:\n", + " continue\n", + "\n", + " # INFO: This originally loaded in the procedures files, but is not necessary at this moment since i have them saved. Prior block now loads these files into same structure.\n", + " request = requests.get(f\"http://aind-metadata-service/procedures/{sample_id}\")\n", + " #TODO: check for invalid/missing models\n", + "\n", + " if request.status_code == 404:\n", + " print(f\"{sample_id} model not found\")\n", + "\n", + " item = request.json()\n", + " print(item['message'])\n", + "\n", + " if item['message'] == 'Valid Model.':\n", + " with open(f'./original_spec_files/{sample_id}.json', 'w') as outfile:\n", + " json.dump(item['data'], outfile)\n", + " else:\n", + " with open(f'./original_spec_files/{sample_id}_invalid.json', 'w') as outfile:\n", + " json.dump(item['data'], outfile)" + ] + }, + { + "cell_type": "code", + "execution_count": 4, + "metadata": {}, + "outputs": [], + "source": [ + "for row_idx, row in base.iterrows():\n", + " sample_id = str(row['Sample'])\n", + " genotype = row['Genotype']\n", + " label = row['Label']\n", + " inj_age = row['Age of Injection']\n", + " post_fix = row['Post-Fix']\n", + " \n" + ] + } + ], + "metadata": { + "kernelspec": { + "display_name": "ainds", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.11.5" + } + }, + "nbformat": 4, + "nbformat_minor": 2 +} diff --git a/scripts/Exaspim_ingest/original_spec_files/576404_invalid.json b/scripts/Exaspim_ingest/original_spec_files/576404_invalid.json new file mode 100644 index 00000000..75c67993 --- /dev/null +++ b/scripts/Exaspim_ingest/original_spec_files/576404_invalid.json @@ -0,0 +1 @@ +{"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", "schema_version": "0.11.5", "subject_id": "576404", "subject_procedures": [{"procedure_type": "Surgery", "start_date": 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b/scripts/Exaspim_ingest/original_spec_files/674191_invalid.json new file mode 100644 index 00000000..50b72b31 --- /dev/null +++ b/scripts/Exaspim_ingest/original_spec_files/674191_invalid.json @@ -0,0 +1 @@ +{"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", "schema_version": "0.11.5", "subject_id": "674191", "subject_procedures": [{"procedure_type": "Surgery", "start_date": "2023-03-31", "experimenter_full_name": "30509", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"injection_materials": [], "recovery_time": null, "recovery_time_unit": "minute", "injection_duration": null, "injection_duration_unit": "minute", "instrument_id": null, "procedure_type": "Retro-orbital injection", "injection_volume": null, "injection_volume_unit": "microliter", "injection_eye": null}], "notes": null}, {"procedure_type": "Surgery", "start_date": "2023-05-05", "experimenter_full_name": "30509", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"procedure_type": "Perfusion", "output_specimen_ids": ["674191"]}], "notes": null}], "specimen_procedures": [], "notes": null} \ No newline at end of file From 855b6ed158572d10567723f19dd66f4c56ef5c3a Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Tue, 5 Mar 2024 13:39:04 -0500 Subject: [PATCH 08/43] loading all fields --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 1250 +++++++++++++++---- 1 file changed, 1040 insertions(+), 210 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index 65abe173..3f91920e 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -18,191 +18,107 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": 7, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "\n" + "[5 rows x 35 columns]\n" ] } ], "source": [ "with pd.option_context(\"display.multi_sparse\", False):\n", - " print(base.head)\n", + " print(base.head())\n", " " ] }, { "cell_type": "code", - "execution_count": 6, + "execution_count": 3, "metadata": {}, "outputs": [ { @@ -451,56 +367,970 @@ "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648079'}}, input_type=dict]\n", " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648698\n" - ] - } - ], - "source": [ - "subj_procedures = {}\n", - "\n", - "download_files = True\n", - "\n", - "\n", - "if download_files:\n", - " for row_idx, row in base.iterrows(): \n", - "\n", - " sample_id = str(row['Sample']['Unnamed: 4_level_1']['Unnamed: 4_level_2'])\n", - " print(sample_id)\n", - " \n", - " if len(sample_id) != 6:\n", - " continue\n", - "\n", - " # INFO: This originally loaded in the procedures files, but is not necessary at this moment since i have them saved. Prior block now loads these files into same structure.\n", - " request = requests.get(f\"http://aind-metadata-service/procedures/{sample_id}\")\n", - " #TODO: check for invalid/missing models\n", - "\n", - " if request.status_code == 404:\n", - " print(f\"{sample_id} model not found\")\n", - "\n", - " item = request.json()\n", - " print(item['message'])\n", - "\n", - " if item['message'] == 'Valid Model.':\n", - " with open(f'./original_spec_files/{sample_id}.json', 'w') as outfile:\n", - " json.dump(item['data'], outfile)\n", - " else:\n", - " with open(f'./original_spec_files/{sample_id}_invalid.json', 'w') as outfile:\n", - " json.dump(item['data'], outfile)" - ] - }, - { - "cell_type": "code", - "execution_count": 4, - "metadata": {}, - "outputs": [], - "source": [ - "for row_idx, row in base.iterrows():\n", - " sample_id = str(row['Sample'])\n", - " genotype = row['Genotype']\n", - " label = row['Label']\n", - " inj_age = row['Age of Injection']\n", - " post_fix = row['Post-Fix']\n", - " \n" + "648698\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648698'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648699\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648699'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648700\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648700'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648696\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648696'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648695\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648695'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648697\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648697'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "651324\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651324'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "651327\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651327'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "650008\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650008'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "650009\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650009'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "650010\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650010'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "650011\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650011'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "652779\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652779'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "652781\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652781'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648434\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648434'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648435\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648435'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648436\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648436'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "651305\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651305'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653432\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653432'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "nan\n", + "nan\n", + "653430\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653430'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "nan\n", + "653431\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653431'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "nan\n", + "653980\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653980'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "654727\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654727'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653981\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653981'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653159\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653159'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653158\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653158'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "658734\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658734'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "658735\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658735'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "613814\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'613814'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "618583\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'618583'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "Z13288-QN22-26-036\n", + "659146\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'659146'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653153\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653153'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660629\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660629'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660630\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660630'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "657676\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'657676'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660950\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660950'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "651895\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651895'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "654306\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654306'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "661300\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'661300'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660949\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660949'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "651897\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651897'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "654308\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654308'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "665470\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665470'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "664761\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'664761'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "665465\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665465'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "665082\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665082'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "665081\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665081'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "652441\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652441'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "652445\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652445'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660625\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660625'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660627\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660627'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "Janelia's brain\n", + "674184\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'674184'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "674190\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'674190'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "674185\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'674185'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "674191\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'674191'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "668294\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'668294'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "667857\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'667857'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "669973\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'669973'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "669977\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'669977'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "nan\n", + "nan\n", + "650819\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650819'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "634173\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'634173'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "658733\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658733'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "nan\n", + "nan\n" + ] + } + ], + "source": [ + "subj_procedures = {}\n", + "\n", + "download_files = True\n", + "\n", + "\n", + "if download_files:\n", + " for row_idx, row in base.iterrows(): \n", + "\n", + " sample_id = str(row['Sample']['Unnamed: 4_level_1']['Unnamed: 4_level_2'])\n", + " print(sample_id)\n", + " \n", + " if len(sample_id) != 6:\n", + " continue\n", + "\n", + " # INFO: This originally loaded in the procedures files, but is not necessary at this moment since i have them saved. Prior block now loads these files into same structure.\n", + " request = requests.get(f\"http://aind-metadata-service/procedures/{sample_id}\")\n", + " #TODO: check for invalid/missing models\n", + "\n", + " if request.status_code == 404:\n", + " print(f\"{sample_id} model not found\")\n", + "\n", + " item = request.json()\n", + " print(item['message'])\n", + "\n", + " if item['message'] == 'Valid Model.':\n", + " with open(f'./original_spec_files/{sample_id}.json', 'w') as outfile:\n", + " json.dump(item['data'], outfile)\n", + " else:\n", + " with open(f'./original_spec_files/{sample_id}_invalid.json', 'w') as outfile:\n", + " json.dump(item['data'], outfile)" + ] + }, + { + "cell_type": "code", + "execution_count": 4, + "metadata": {}, + "outputs": [], + "source": [ + "for row_idx, row in base.iterrows():\n", + " sample_id = str(row['Sample']['Unnamed: 4_level_1']['Unnamed: 4_level_2'])\n", + " genotype = row['Genotype']['Unnamed: 5_level_1']['Unnamed: 5_level_2']\n", + " label = row['Label']['Unnamed: 6_level_1']['Unnamed: 6_level_2']\n", + " inj_age = row['Age of Injection']['Unnamed: 7_level_1']['Unnamed: 7_level_2']\n", + " post_fix = row['Post-Fix']['Unnamed: 8_level_1']['Unnamed: 8_level_2']\n", + " dcm_delip_start = row['DCM Delipidation (8-10d)']['Unnamed: 9_level_1']['Date Started']\n", + " dcm_delip_end = row['DCM Delipidation (8-10d)']['Unnamed: 9_level_1']['Date Finished']\n", + " sbip_delip_start = row['SBiP Delipidation (7-9d)']['Unnamed: 10_level_1']['Date Started']\n", + " sbip_delip_end = row['SBiP Delipidation (7-9d)']['Unnamed: 10_level_1']['Date Finished']\n", + " immunolabeling_primary = row['Immunolabeling (31-33d)']['Unnamed: 11_level_1']['Primary (10ug, 20ug for primary Conjugate)']\n", + " immunolabeling_secondary = row['Immunolabeling (31-33d)']['Unnamed: 12_level_1']['Secondary (20ug)']\n", + " mbs_gel_start = row['Gelation (25d)']['MBS']['Date Started']\n", + " mbs_gel_end = row['Gelation (25d)']['MBS']['Date Finished']\n", + " acx_gel_start = row['Gelation (25d)']['AcX']['Date Started']\n", + " acx_gel_end = row['Gelation (25d)']['AcX']['Date Finished']\n", + " pbs_gel_start = row['Gelation (25d)']['PBS Wash']['Date Started']\n", + " pbs_gel_end = row['Gelation (25d)']['PBS Wash']['Date Finished']\n", + " stock_gel_start = row['Gelation (25d)']['Stock X + VA-044 Equilibration']['Date Started']\n", + " stock_gel_end = row['Gelation (25d)']['Stock X + VA-044 Equilibration']['Date Finished']\n", + " prok_gel_start = row['Gelation (25d)']['Gelation + ProK RT']['Date Started']\n", + " prok_gel_end = row['Gelation (25d)']['Gelation + ProK RT']['Date Finished']\n", + " prok_rt_gel_time = row['Gelation (25d)']['Gelation + ProK RT']['Time']\n", + " prok_37c_gel_start = row['Gelation (25d)'][\"Gelation + Add'l ProK 37C\"]['Date Started']\n", + " prok_37c_gel_end = row['Gelation (25d)'][\"Gelation + Add'l ProK 37C\"]['Date Finished']\n", + " prok_37c_gel_time = row['Gelation (25d)'][\"Gelation + Add'l ProK 37C\"]['Time']\n", + " pbs2_gel_start = row['Gelation (25d)']['PBS Wash']['Date Started.1']\n", + " pbs2_gel_end = row['Gelation (25d)']['PBS Wash']['Date Finished.1']\n", + " pbs_stored_bool = row['Gelation (25d)']['PBS Wash']['Stored in PBS Azide 0.01% at 4C']\n", + " notes1 = row['Gelation (25d)']['PBS Wash']['Notes']\n", + " notes2 = row['Gelation (25d)']['PBS Wash']['Notes.1']\n", + " notes3 = row['Gelation (25d)']['PBS Wash']['Notes.2']\n", + "\n", + "\n", + "\n", + "\n", + "\n", + "\n" ] } ], From 8f1d84db9385d7d377e204d475393d8e22000aff Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Wed, 6 Mar 2024 16:22:44 -0500 Subject: [PATCH 09/43] Update ingest_exaspim.ipynb --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 1536 +++++-------------- 1 file changed, 387 insertions(+), 1149 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index 3f91920e..8da161de 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -13,12 +13,16 @@ "from datetime import datetime\n", "import glob\n", "from enum import Enum\n", + "\n", + "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, Immunolabeling, HCRSeries\n", + "\n", + "\n", "base = pd.read_excel(\"./ExM Sample Tracking.xlsx\", sheet_name=\"ExM Tissue Processing\", header=[0,1,2], converters={})\n" ] }, { "cell_type": "code", - "execution_count": 7, + "execution_count": 2, "metadata": {}, "outputs": [ { @@ -120,1144 +124,11 @@ "cell_type": "code", "execution_count": 3, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "576404\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'576404'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "609105\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609105'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "609107\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609107'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "609281\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609281'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "614978\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'614978'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "614980\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'614980'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "615296\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'615296'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "603033\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'603033'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "618584\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'618584'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "146\n", - "620631\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'620631'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "620629\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'620629'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648860\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648860'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648861\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648861'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648858\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648858'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648862\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648862'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648077\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648077'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648079\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648079'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648698\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648698'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648699\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648699'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648700\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648700'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648696\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648696'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648695\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648695'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648697\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648697'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "651324\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651324'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "651327\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651327'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "650008\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650008'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "650009\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650009'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "650010\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650010'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "650011\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650011'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "652779\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652779'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "652781\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652781'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648434\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648434'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648435\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648435'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648436\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648436'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "651305\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651305'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653432\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653432'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "nan\n", - "nan\n", - "653430\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653430'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "nan\n", - "653431\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653431'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "nan\n", - "653980\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653980'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "654727\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654727'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653981\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653981'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653159\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653159'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653158\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653158'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "658734\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658734'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "658735\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658735'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "613814\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'613814'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "618583\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'618583'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "Z13288-QN22-26-036\n", - "659146\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'659146'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653153\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653153'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660629\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660629'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660630\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660630'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "657676\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'657676'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660950\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660950'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "651895\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651895'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "654306\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654306'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "661300\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'661300'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660949\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660949'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "651897\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651897'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "654308\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654308'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "665470\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665470'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "664761\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'664761'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "665465\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665465'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "665082\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665082'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "665081\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665081'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "652441\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652441'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "652445\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652445'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660625\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660625'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660627\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660627'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "Janelia's brain\n", - "674184\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'674184'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "674190\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'674190'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "674185\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'674185'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "674191\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'674191'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "668294\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'668294'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "667857\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'667857'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "669973\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'669973'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "669977\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'669977'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "nan\n", - "nan\n", - "650819\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650819'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "634173\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'634173'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "658733\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658733'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "nan\n", - "nan\n" - ] - } - ], + "outputs": [], "source": [ "subj_procedures = {}\n", "\n", - "download_files = True\n", + "download_files = False\n", "\n", "\n", "if download_files:\n", @@ -1293,45 +164,412 @@ "metadata": {}, "outputs": [], "source": [ + "class SpecMaker():\n", + " def __init__(self, experimenter, sample_id, existing_procedure:dict=None) -> None:\n", + " self.experimenter = experimenter\n", + " self.sample_id = sample_id\n", + " self.existing_procedure = existing_procedure\n", + " \n", + " def make_spec_procedure(self, start, end, procedure_type, procedure_name, notes=None, protocol_id=\"unknown\", reagent=[], immunolabeling:Immunolabeling=None, hcr_series:HCRSeries=None):\n", + " return SpecimenProcedure(\n", + " procedure_type=procedure_type,\n", + " procedure_name=procedure_name,\n", + " specimen_id=self.sample_id,\n", + " start_date=start,\n", + " end_date=end,\n", + " experimenter_full_name=self.experimenter,\n", + " protocol_id=protocol_id,\n", + " reagents=reagent,\n", + " hcr_series=hcr_series,\n", + " immunolabeling=immunolabeling,\n", + " notes=notes,\n", + " )\n", + " " + ] + }, + { + "cell_type": "code", + "execution_count": 5, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2021-10-01 00:00:00'), 'end_date': Timestamp('2021-10-11 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2021-10-25 00:00:00'), 'end_date': Timestamp('2021-11-03 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2021-11-10 00:00:00'), 'end_date': Timestamp('2021-11-11 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2021-11-12 00:00:00'), 'end_date': Timestamp('2022-11-16 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2021, 11, 16, 0, 0), 'end_date': datetime.datetime(2021, 11, 18, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-11-18 00:00:00'), 'end_date': Timestamp('2021-11-22 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2021-11-23 00:00:00'), 'end_date': Timestamp('2021-11-25 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2021-11-25 00:00:00'), 'end_date': Timestamp('2021-12-01 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2021-12-01 00:00:00'), 'end_date': Timestamp('2021-12-03 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='576404', start_date=datetime.date(2021, 10, 1), end_date=datetime.date(2021, 10, 11), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='576404', start_date=datetime.date(2021, 10, 25), end_date=datetime.date(2021, 11, 3), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='576404', start_date=datetime.date(2021, 11, 10), end_date=datetime.date(2021, 11, 11), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='576404', start_date=datetime.date(2021, 11, 12), end_date=datetime.date(2022, 11, 16), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='576404', start_date=datetime.date(2021, 11, 16), end_date=datetime.date(2021, 11, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='576404', start_date=datetime.date(2022, 11, 18), end_date=datetime.date(2021, 11, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='576404', start_date=datetime.date(2021, 11, 23), end_date=datetime.date(2021, 11, 25), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='576404', start_date=datetime.date(2021, 11, 25), end_date=datetime.date(2021, 12, 1), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='576404', start_date=datetime.date(2021, 12, 1), end_date=datetime.date(2021, 12, 3), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-01-21 00:00:00'), 'end_date': Timestamp('2022-02-02 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-02-03 00:00:00'), 'end_date': Timestamp('2022-02-15 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-05-06 00:00:00'), 'end_date': Timestamp('2022-05-10 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 5, 10, 0, 0), 'end_date': datetime.datetime(2022, 5, 11, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-05-12 00:00:00'), 'end_date': Timestamp('2022-05-16 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-05-17 00:00:00'), 'end_date': Timestamp('2022-05-22 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-05-22 00:00:00'), 'end_date': Timestamp('2022-05-30 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-05-30 00:00:00'), 'end_date': Timestamp('2022-06-02 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='609105', start_date=datetime.date(2022, 1, 21), end_date=datetime.date(2022, 2, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='609105', start_date=datetime.date(2022, 2, 3), end_date=datetime.date(2022, 2, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='609105', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='609105', start_date=datetime.date(2022, 5, 6), end_date=datetime.date(2022, 5, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='609105', start_date=datetime.date(2022, 5, 10), end_date=datetime.date(2022, 5, 11), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='609105', start_date=datetime.date(2022, 5, 12), end_date=datetime.date(2022, 5, 16), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='609105', start_date=datetime.date(2022, 5, 17), end_date=datetime.date(2022, 5, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='609105', start_date=datetime.date(2022, 5, 22), end_date=datetime.date(2022, 5, 30), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='609105', start_date=datetime.date(2022, 5, 30), end_date=datetime.date(2022, 6, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='609107', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='609107', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='609107', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='609107', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='609107', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='609107', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='609107', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='609107', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='609107', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='609281', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='609281', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='609281', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='609281', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='609281', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='609281', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='609281', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='609281', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='609281', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='614978', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='614978', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='614978', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='614978', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='614978', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='614978', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='614978', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='614978', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='614978', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='614980', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='614980', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='614980', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='614980', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='614980', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='614980', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='614980', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='614980', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='614980', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='615296', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='615296', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='615296', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='615296', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='615296', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='615296', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='615296', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='615296', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='615296', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2021-12-26 00:00:00'), 'end_date': Timestamp('2022-01-05 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-01-05 00:00:00'), 'end_date': Timestamp('2022-01-14 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-06-16 00:00:00'), 'end_date': Timestamp('2022-06-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-06-17 00:00:00'), 'end_date': Timestamp('2022-06-21 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 6, 21, 0, 0), 'end_date': datetime.datetime(2022, 6, 23, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-06-24 00:00:00'), 'end_date': Timestamp('2022-06-28 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-07-01 00:00:00'), 'end_date': Timestamp('2022-07-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-07-06 00:00:00'), 'end_date': Timestamp('2022-07-13 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-07-13 00:00:00'), 'end_date': Timestamp('2022-07-15 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='603033', start_date=datetime.date(2021, 12, 26), end_date=datetime.date(2022, 1, 5), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='603033', start_date=datetime.date(2022, 1, 5), end_date=datetime.date(2022, 1, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='603033', start_date=datetime.date(2022, 6, 16), end_date=datetime.date(2022, 6, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='603033', start_date=datetime.date(2022, 6, 17), end_date=datetime.date(2022, 6, 21), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='603033', start_date=datetime.date(2022, 6, 21), end_date=datetime.date(2022, 6, 23), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='603033', start_date=datetime.date(2022, 6, 24), end_date=datetime.date(2022, 6, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='603033', start_date=datetime.date(2022, 7, 1), end_date=datetime.date(2022, 7, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='603033', start_date=datetime.date(2022, 7, 6), end_date=datetime.date(2022, 7, 13), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='603033', start_date=datetime.date(2022, 7, 13), end_date=datetime.date(2022, 7, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-06-10 00:00:00'), 'end_date': Timestamp('2022-06-23 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-06-27 00:00:00'), 'end_date': Timestamp('2022-07-14 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': Timestamp('2023-09-24 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-09-24 00:00:00'), 'end_date': Timestamp('2023-09-29 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 9, 29, 0, 0), 'end_date': datetime.datetime(2022, 10, 1, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-10-02 00:00:00'), 'end_date': Timestamp('2022-10-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-10-07 00:00:00'), 'end_date': Timestamp('2022-10-12 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-10-12 00:00:00'), 'end_date': Timestamp('2022-10-24 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-10-24 00:00:00'), 'end_date': Timestamp('2022-10-26 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='618584', start_date=datetime.date(2022, 6, 10), end_date=datetime.date(2022, 6, 23), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='618584', start_date=datetime.date(2022, 6, 27), end_date=datetime.date(2022, 7, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='618584', start_date=datetime.date(2023, 9, 24), end_date=datetime.date(2023, 9, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='618584', start_date=datetime.date(2022, 9, 29), end_date=datetime.date(2022, 10, 1), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='618584', start_date=datetime.date(2022, 10, 2), end_date=datetime.date(2022, 10, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='618584', start_date=datetime.date(2022, 10, 7), end_date=datetime.date(2022, 10, 12), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='618584', start_date=datetime.date(2022, 10, 12), end_date=datetime.date(2022, 10, 24), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='618584', start_date=datetime.date(2022, 10, 24), end_date=datetime.date(2022, 10, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': 'Unknown', 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': nan, 'end_date': nan, 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "[]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-06-21 00:00:00'), 'end_date': Timestamp('2022-06-30 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-07-06 00:00:00'), 'end_date': Timestamp('2022-07-12 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-11-08 00:00:00'), 'end_date': Timestamp('2022-11-09 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-11-10 00:00:00'), 'end_date': Timestamp('2022-11-13 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 11, 14, 0, 0), 'end_date': datetime.datetime(2022, 11, 15, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-11-16 00:00:00'), 'end_date': Timestamp('2022-11-20 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-11-21 00:00:00'), 'end_date': Timestamp('2022-11-26 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-11-26 00:00:00'), 'end_date': Timestamp('2022-12-05 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-12-05 00:00:00'), 'end_date': Timestamp('2022-12-07 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='620631', start_date=datetime.date(2022, 6, 21), end_date=datetime.date(2022, 6, 30), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='620631', start_date=datetime.date(2022, 7, 6), end_date=datetime.date(2022, 7, 12), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='620631', start_date=datetime.date(2022, 11, 8), end_date=datetime.date(2022, 11, 9), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='620631', start_date=datetime.date(2022, 11, 10), end_date=datetime.date(2022, 11, 13), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='620631', start_date=datetime.date(2022, 11, 14), end_date=datetime.date(2022, 11, 15), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='620631', start_date=datetime.date(2022, 11, 16), end_date=datetime.date(2022, 11, 20), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='620631', start_date=datetime.date(2022, 11, 21), end_date=datetime.date(2022, 11, 26), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='620631', start_date=datetime.date(2022, 11, 26), end_date=datetime.date(2022, 12, 5), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='620631', start_date=datetime.date(2022, 12, 5), end_date=datetime.date(2022, 12, 7), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-06-21 00:00:00'), 'end_date': Timestamp('2022-06-30 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-07-06 00:00:00'), 'end_date': Timestamp('2022-07-12 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-11-08 00:00:00'), 'end_date': Timestamp('2022-11-09 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-11-10 00:00:00'), 'end_date': Timestamp('2022-11-13 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 11, 14, 0, 0), 'end_date': datetime.datetime(2022, 11, 15, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-11-16 00:00:00'), 'end_date': Timestamp('2022-11-20 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-11-21 00:00:00'), 'end_date': Timestamp('2022-11-26 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-11-26 00:00:00'), 'end_date': Timestamp('2022-11-29 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-11-29 00:00:00'), 'end_date': Timestamp('2021-12-01 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='620629', start_date=datetime.date(2022, 6, 21), end_date=datetime.date(2022, 6, 30), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='620629', start_date=datetime.date(2022, 7, 6), end_date=datetime.date(2022, 7, 12), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='620629', start_date=datetime.date(2022, 11, 8), end_date=datetime.date(2022, 11, 9), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='620629', start_date=datetime.date(2022, 11, 10), end_date=datetime.date(2022, 11, 13), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='620629', start_date=datetime.date(2022, 11, 14), end_date=datetime.date(2022, 11, 15), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='620629', start_date=datetime.date(2022, 11, 16), end_date=datetime.date(2022, 11, 20), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='620629', start_date=datetime.date(2022, 11, 21), end_date=datetime.date(2022, 11, 26), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='620629', start_date=datetime.date(2022, 11, 26), end_date=datetime.date(2022, 11, 29), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='620629', start_date=datetime.date(2022, 11, 29), end_date=datetime.date(2021, 12, 1), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-02-01 00:00:00'), 'end_date': Timestamp('2023-02-02 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-02-02 00:00:00'), 'end_date': Timestamp('2023-02-08 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 2, 8, 0, 0), 'end_date': datetime.datetime(2023, 2, 10, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-02-10 00:00:00'), 'end_date': Timestamp('2023-02-14 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-02-14 00:00:00'), 'end_date': Timestamp('2023-02-20 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-02-20 00:00:00'), 'end_date': Timestamp('2023-02-25 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-02-25 00:00:00'), 'end_date': Timestamp('2023-02-27 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648860', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648860', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648860', start_date=datetime.date(2023, 2, 1), end_date=datetime.date(2023, 2, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648860', start_date=datetime.date(2023, 2, 2), end_date=datetime.date(2023, 2, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648860', start_date=datetime.date(2023, 2, 8), end_date=datetime.date(2023, 2, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648860', start_date=datetime.date(2023, 2, 10), end_date=datetime.date(2023, 2, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648860', start_date=datetime.date(2023, 2, 14), end_date=datetime.date(2023, 2, 20), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648860', start_date=datetime.date(2023, 2, 20), end_date=datetime.date(2023, 2, 25), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648860', start_date=datetime.date(2023, 2, 25), end_date=datetime.date(2023, 2, 27), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648861', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648861', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648858', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648858', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648862', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648862', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-02-09 00:00:00'), 'end_date': Timestamp('2023-02-10 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-02-10 00:00:00'), 'end_date': Timestamp('2023-02-15 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 2, 15, 0, 0), 'end_date': datetime.datetime(2023, 2, 19, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-02-19 00:00:00'), 'end_date': Timestamp('2023-02-23 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-02-23 00:00:00'), 'end_date': Timestamp('2023-02-28 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-02-28 00:00:00'), 'end_date': Timestamp('2023-03-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-03-06 00:00:00'), 'end_date': Timestamp('2023-03-08 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648077', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648077', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648077', start_date=datetime.date(2023, 2, 9), end_date=datetime.date(2023, 2, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648077', start_date=datetime.date(2023, 2, 10), end_date=datetime.date(2023, 2, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648077', start_date=datetime.date(2023, 2, 15), end_date=datetime.date(2023, 2, 19), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648077', start_date=datetime.date(2023, 2, 19), end_date=datetime.date(2023, 2, 23), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648077', start_date=datetime.date(2023, 2, 23), end_date=datetime.date(2023, 2, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648077', start_date=datetime.date(2023, 2, 28), end_date=datetime.date(2023, 3, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648077', start_date=datetime.date(2023, 3, 6), end_date=datetime.date(2023, 3, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-01-06 00:00:00'), 'end_date': Timestamp('2023-01-09 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-01-09 00:00:00'), 'end_date': Timestamp('2023-01-13 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 1, 13, 0, 0), 'end_date': datetime.datetime(2023, 1, 15, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-01-15 00:00:00'), 'end_date': Timestamp('2023-01-20 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-01-20 00:00:00'), 'end_date': Timestamp('2023-01-24 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-01-24 00:00:00'), 'end_date': Timestamp('2023-02-02 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-02-02 00:00:00'), 'end_date': Timestamp('2023-02-06 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648079', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648079', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648079', start_date=datetime.date(2023, 1, 6), end_date=datetime.date(2023, 1, 9), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648079', start_date=datetime.date(2023, 1, 9), end_date=datetime.date(2023, 1, 13), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648079', start_date=datetime.date(2023, 1, 13), end_date=datetime.date(2023, 1, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648079', start_date=datetime.date(2023, 1, 15), end_date=datetime.date(2023, 1, 20), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648079', start_date=datetime.date(2023, 1, 20), end_date=datetime.date(2023, 1, 24), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648079', start_date=datetime.date(2023, 1, 24), end_date=datetime.date(2023, 2, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648079', start_date=datetime.date(2023, 2, 2), end_date=datetime.date(2023, 2, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-01-06 00:00:00'), 'end_date': Timestamp('2023-01-09 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-01-09 00:00:00'), 'end_date': Timestamp('2023-01-13 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 1, 13, 0, 0), 'end_date': datetime.datetime(2023, 1, 15, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-01-15 00:00:00'), 'end_date': Timestamp('2023-01-20 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-01-20 00:00:00'), 'end_date': Timestamp('2023-01-24 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-01-24 00:00:00'), 'end_date': Timestamp('2023-02-02 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-02-02 00:00:00'), 'end_date': Timestamp('2023-02-06 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648698', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648698', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648698', start_date=datetime.date(2023, 1, 6), end_date=datetime.date(2023, 1, 9), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648698', start_date=datetime.date(2023, 1, 9), end_date=datetime.date(2023, 1, 13), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648698', start_date=datetime.date(2023, 1, 13), end_date=datetime.date(2023, 1, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648698', start_date=datetime.date(2023, 1, 15), end_date=datetime.date(2023, 1, 20), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648698', start_date=datetime.date(2023, 1, 20), end_date=datetime.date(2023, 1, 24), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648698', start_date=datetime.date(2023, 1, 24), end_date=datetime.date(2023, 2, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648698', start_date=datetime.date(2023, 2, 2), end_date=datetime.date(2023, 2, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648699', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648699', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648700', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648700', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-04-28 00:00:00'), 'end_date': Timestamp('2023-05-04 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-05-04 00:00:00'), 'end_date': Timestamp('2023-05-08 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 5, 8, 0, 0), 'end_date': datetime.datetime(2023, 5, 10, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-05-11 00:00:00'), 'end_date': Timestamp('2023-05-15 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-05-17 00:00:00'), 'end_date': Timestamp('2023-05-22 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-05-22 00:00:00'), 'end_date': Timestamp('2023-06-01 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-06-01 00:00:00'), 'end_date': Timestamp('2023-06-03 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648696', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648696', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648696', start_date=datetime.date(2023, 4, 28), end_date=datetime.date(2023, 5, 4), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648696', start_date=datetime.date(2023, 5, 4), end_date=datetime.date(2023, 5, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648696', start_date=datetime.date(2023, 5, 8), end_date=datetime.date(2023, 5, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648696', start_date=datetime.date(2023, 5, 11), end_date=datetime.date(2023, 5, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648696', start_date=datetime.date(2023, 5, 17), end_date=datetime.date(2023, 5, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648696', start_date=datetime.date(2023, 5, 22), end_date=datetime.date(2023, 6, 1), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648696', start_date=datetime.date(2023, 6, 1), end_date=datetime.date(2023, 6, 3), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648695', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648695', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-04-28 00:00:00'), 'end_date': Timestamp('2023-05-04 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-05-04 00:00:00'), 'end_date': Timestamp('2023-05-08 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 5, 8, 0, 0), 'end_date': datetime.datetime(2023, 5, 10, 0, 0), 'procedure_type': }\n", + "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-05-11 00:00:00'), 'end_date': Timestamp('2023-05-15 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-05-17 00:00:00'), 'end_date': Timestamp('2023-05-22 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-05-22 00:00:00'), 'end_date': Timestamp('2023-06-01 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-06-01 00:00:00'), 'end_date': Timestamp('2023-06-03 00:00:00'), 'procedure_type': }\n", + "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648697', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648697', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648697', start_date=datetime.date(2023, 4, 28), end_date=datetime.date(2023, 5, 4), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648697', start_date=datetime.date(2023, 5, 4), end_date=datetime.date(2023, 5, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648697', start_date=datetime.date(2023, 5, 8), end_date=datetime.date(2023, 5, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648697', start_date=datetime.date(2023, 5, 11), end_date=datetime.date(2023, 5, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648697', start_date=datetime.date(2023, 5, 17), end_date=datetime.date(2023, 5, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648697', start_date=datetime.date(2023, 5, 22), end_date=datetime.date(2023, 6, 1), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648697', start_date=datetime.date(2023, 6, 1), end_date=datetime.date(2023, 6, 3), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", + "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-21 00:00:00'), 'end_date': Timestamp('2022-12-05 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2023-12-06 00:00:00'), 'end_date': Timestamp('2022-12-18 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-01-23 00:00:00'), 'end_date': Timestamp('2023-01-24 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-01-24 00:00:00'), 'end_date': Timestamp('2023-01-28 00:00:00'), 'procedure_type': }\n", + "{'procedure_name': 'PBS Wash', 'start_date': '1/28/.2023', 'end_date': datetime.datetime(2023, 1, 31, 0, 0), 'procedure_type': }\n" + ] + }, + { + "ename": "ValidationError", + "evalue": "1 validation error for SpecimenProcedure\nstart_date\n Input should be a valid date or datetime, invalid character in year [type=date_from_datetime_parsing, input_value='1/28/.2023', input_type=str]\n For further information visit https://errors.pydantic.dev/2.6/v/date_from_datetime_parsing", + "output_type": "error", + "traceback": [ + "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", + "\u001b[1;31mValidationError\u001b[0m Traceback (most recent call last)", + "Cell \u001b[1;32mIn[5], line 92\u001b[0m\n\u001b[0;32m 90\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m pd\u001b[38;5;241m.\u001b[39misna(item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mstart_date\u001b[39m\u001b[38;5;124m'\u001b[39m]) \u001b[38;5;129;01mor\u001b[39;00m pd\u001b[38;5;241m.\u001b[39misna(item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mend_date\u001b[39m\u001b[38;5;124m'\u001b[39m]):\n\u001b[0;32m 91\u001b[0m \u001b[38;5;28;01mcontinue\u001b[39;00m\n\u001b[1;32m---> 92\u001b[0m specimen_procedures\u001b[38;5;241m.\u001b[39mappend(spec_maker\u001b[38;5;241m.\u001b[39mmake_spec_procedure(item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mstart_date\u001b[39m\u001b[38;5;124m'\u001b[39m], item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mend_date\u001b[39m\u001b[38;5;124m'\u001b[39m], item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mprocedure_type\u001b[39m\u001b[38;5;124m'\u001b[39m], item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mprocedure_name\u001b[39m\u001b[38;5;124m'\u001b[39m]))\n\u001b[0;32m 94\u001b[0m \u001b[38;5;28mprint\u001b[39m(specimen_procedures)\n", + "Cell \u001b[1;32mIn[4], line 8\u001b[0m, in \u001b[0;36mSpecMaker.make_spec_procedure\u001b[1;34m(self, start, end, procedure_type, procedure_name, notes, protocol_id, reagent, immunolabeling, hcr_series)\u001b[0m\n\u001b[0;32m 7\u001b[0m \u001b[38;5;28;01mdef\u001b[39;00m \u001b[38;5;21mmake_spec_procedure\u001b[39m(\u001b[38;5;28mself\u001b[39m, start, end, procedure_type, procedure_name, notes\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mNone\u001b[39;00m, protocol_id\u001b[38;5;241m=\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124munknown\u001b[39m\u001b[38;5;124m\"\u001b[39m, reagent\u001b[38;5;241m=\u001b[39m[], immunolabeling:Immunolabeling\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mNone\u001b[39;00m, hcr_series:HCRSeries\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mNone\u001b[39;00m):\n\u001b[1;32m----> 8\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m SpecimenProcedure(\n\u001b[0;32m 9\u001b[0m procedure_type\u001b[38;5;241m=\u001b[39mprocedure_type,\n\u001b[0;32m 10\u001b[0m procedure_name\u001b[38;5;241m=\u001b[39mprocedure_name,\n\u001b[0;32m 11\u001b[0m specimen_id\u001b[38;5;241m=\u001b[39m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39msample_id,\n\u001b[0;32m 12\u001b[0m start_date\u001b[38;5;241m=\u001b[39mstart,\n\u001b[0;32m 13\u001b[0m end_date\u001b[38;5;241m=\u001b[39mend,\n\u001b[0;32m 14\u001b[0m experimenter_full_name\u001b[38;5;241m=\u001b[39m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mexperimenter,\n\u001b[0;32m 15\u001b[0m protocol_id\u001b[38;5;241m=\u001b[39mprotocol_id,\n\u001b[0;32m 16\u001b[0m reagents\u001b[38;5;241m=\u001b[39mreagent,\n\u001b[0;32m 17\u001b[0m hcr_series\u001b[38;5;241m=\u001b[39mhcr_series,\n\u001b[0;32m 18\u001b[0m immunolabeling\u001b[38;5;241m=\u001b[39mimmunolabeling,\n\u001b[0;32m 19\u001b[0m notes\u001b[38;5;241m=\u001b[39mnotes,\n\u001b[0;32m 20\u001b[0m )\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pydantic\\main.py:171\u001b[0m, in \u001b[0;36mBaseModel.__init__\u001b[1;34m(self, **data)\u001b[0m\n\u001b[0;32m 169\u001b[0m \u001b[38;5;66;03m# `__tracebackhide__` tells pytest and some other tools to omit this function from tracebacks\u001b[39;00m\n\u001b[0;32m 170\u001b[0m __tracebackhide__ \u001b[38;5;241m=\u001b[39m \u001b[38;5;28;01mTrue\u001b[39;00m\n\u001b[1;32m--> 171\u001b[0m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m__pydantic_validator__\u001b[38;5;241m.\u001b[39mvalidate_python(data, self_instance\u001b[38;5;241m=\u001b[39m\u001b[38;5;28mself\u001b[39m)\n", + "\u001b[1;31mValidationError\u001b[0m: 1 validation error for SpecimenProcedure\nstart_date\n Input should be a valid date or datetime, invalid character in year [type=date_from_datetime_parsing, input_value='1/28/.2023', input_type=str]\n For further information visit https://errors.pydantic.dev/2.6/v/date_from_datetime_parsing" + ] + } + ], + "source": [ + "\n", + "\n", + "def basic_dict(name, start, end, type) -> dict:\n", + " return {\n", + " \"procedure_name\": name,\n", + " \"start_date\": start,\n", + " \"end_date\": end,\n", + " \"procedure_type\": type,\n", + " }\n", + "\n", "for row_idx, row in base.iterrows():\n", + "\n", + " items = []\n", + "\n", + " \n", + " # general info\n", + " processor = row['Processed By:']['Unnamed: 3_level_1']['Unnamed: 3_level_2']\n", " sample_id = str(row['Sample']['Unnamed: 4_level_1']['Unnamed: 4_level_2'])\n", " genotype = row['Genotype']['Unnamed: 5_level_1']['Unnamed: 5_level_2']\n", " label = row['Label']['Unnamed: 6_level_1']['Unnamed: 6_level_2']\n", " inj_age = row['Age of Injection']['Unnamed: 7_level_1']['Unnamed: 7_level_2']\n", " post_fix = row['Post-Fix']['Unnamed: 8_level_1']['Unnamed: 8_level_2']\n", + "\n", + " spec_maker = SpecMaker(processor, sample_id)\n", + "\n", + " # delipidation\n", + " dcm_delip_name = 'DCM Delipidation (8-10d)'\n", " dcm_delip_start = row['DCM Delipidation (8-10d)']['Unnamed: 9_level_1']['Date Started']\n", - " dcm_delip_end = row['DCM Delipidation (8-10d)']['Unnamed: 9_level_1']['Date Finished']\n", - " sbip_delip_start = row['SBiP Delipidation (7-9d)']['Unnamed: 10_level_1']['Date Started']\n", - " sbip_delip_end = row['SBiP Delipidation (7-9d)']['Unnamed: 10_level_1']['Date Finished']\n", - " immunolabeling_primary = row['Immunolabeling (31-33d)']['Unnamed: 11_level_1']['Primary (10ug, 20ug for primary Conjugate)']\n", - " immunolabeling_secondary = row['Immunolabeling (31-33d)']['Unnamed: 12_level_1']['Secondary (20ug)']\n", - " mbs_gel_start = row['Gelation (25d)']['MBS']['Date Started']\n", - " mbs_gel_end = row['Gelation (25d)']['MBS']['Date Finished']\n", + " dcm_delip_end = row['DCM Delipidation (8-10d)']['Unnamed: 10_level_1']['Date Finished']\n", + " items.append(basic_dict(dcm_delip_name, dcm_delip_start, dcm_delip_end, SpecimenProcedureType.DELIPIDATION))\n", + "\n", + "\n", + " sbip_delip_name = 'SBiP Delipidation (7-9d)'\n", + " sbip_delip_start = row['SBiP Delipidation (7-9d)']['Unnamed: 11_level_1']['Date Started']\n", + " sbip_delip_end = row['SBiP Delipidation (7-9d)']['Unnamed: 12_level_1']['Date Finished']\n", + " items.append(basic_dict(sbip_delip_name, sbip_delip_start, sbip_delip_end, SpecimenProcedureType.DELIPIDATION))\n", + "\n", + " # immunolabeling\n", + " immunolabeling_name = 'Immunolabeling (31-33d)'\n", + " immunolabeling_primary = row['Immunolabeling (31-33d)']['Unnamed: 13_level_1']['Primary (10ug, 20ug for primary Conjugate)']\n", + " immunolabeling_secondary = row['Immunolabeling (31-33d)']['Unnamed: 14_level_1']['Secondary (20ug)']\n", + " # items.append(basic_dict(immunolabeling_name, immunolabeling_primary, immunolabeling_secondary, SpecimenProcedureType.IMMUNOLABELING))\n", + "\n", + " # gelation\n", + " mbs_gel_name = 'MBS Gelation'\n", + " mbs_gel_start = row['Gelation (25d)']['MBS ']['Date Started']\n", + " mbs_gel_end = row['Gelation (25d)']['MBS ']['Date Finished']\n", + " items.append(basic_dict(mbs_gel_name, mbs_gel_start, mbs_gel_end, SpecimenProcedureType.GELATION))\n", + "\n", + " acx_gel_name = 'AcX Gelation'\n", " acx_gel_start = row['Gelation (25d)']['AcX']['Date Started']\n", " acx_gel_end = row['Gelation (25d)']['AcX']['Date Finished']\n", + " items.append(basic_dict(acx_gel_name, acx_gel_start, acx_gel_end, SpecimenProcedureType.GELATION))\n", + "\n", + " pbs_gel_name = 'PBS Wash'\n", " pbs_gel_start = row['Gelation (25d)']['PBS Wash']['Date Started']\n", " pbs_gel_end = row['Gelation (25d)']['PBS Wash']['Date Finished']\n", + " items.append(basic_dict(pbs_gel_name, pbs_gel_start, pbs_gel_end, SpecimenProcedureType.GELATION))\n", + "\n", + " stock_gel_name = 'Stock X + VA-044 Equilibration'\n", " stock_gel_start = row['Gelation (25d)']['Stock X + VA-044 Equilibration']['Date Started']\n", " stock_gel_end = row['Gelation (25d)']['Stock X + VA-044 Equilibration']['Date Finished']\n", - " prok_gel_start = row['Gelation (25d)']['Gelation + ProK RT']['Date Started']\n", - " prok_gel_end = row['Gelation (25d)']['Gelation + ProK RT']['Date Finished']\n", - " prok_rt_gel_time = row['Gelation (25d)']['Gelation + ProK RT']['Time']\n", + " items.append(basic_dict(stock_gel_name, stock_gel_start, stock_gel_end, SpecimenProcedureType.GELATION))\n", + "\n", + " prok_gel_name = 'Gelation + ProK RT'\n", + " prok_gel_start = row['Gelation (25d)']['Gelation + ProK RT']['Date Started']\n", + " prok_gel_end = row['Gelation (25d)']['Gelation + ProK RT']['Date Finished']\n", + " items.append(basic_dict(prok_gel_name, prok_gel_start, prok_gel_end, SpecimenProcedureType.GELATION))\n", + " prok_rt_gel_time = row['Gelation (25d)']['Gelation + ProK RT']['TIme']\n", + "\n", + " prok_37c_gel_name = 'Gelation + Add\\'l ProK 37C'\n", " prok_37c_gel_start = row['Gelation (25d)'][\"Gelation + Add'l ProK 37C\"]['Date Started']\n", " prok_37c_gel_end = row['Gelation (25d)'][\"Gelation + Add'l ProK 37C\"]['Date Finished']\n", + " items.append(basic_dict(prok_37c_gel_name, prok_37c_gel_start, prok_37c_gel_end, SpecimenProcedureType.GELATION))\n", " prok_37c_gel_time = row['Gelation (25d)'][\"Gelation + Add'l ProK 37C\"]['Time']\n", + "\n", + " pbs2_gel_name = 'PBS Wash 2'\n", " pbs2_gel_start = row['Gelation (25d)']['PBS Wash']['Date Started.1']\n", " pbs2_gel_end = row['Gelation (25d)']['PBS Wash']['Date Finished.1']\n", + " items.append(basic_dict(pbs2_gel_name, pbs2_gel_start, pbs2_gel_end, SpecimenProcedureType.GELATION))\n", " pbs_stored_bool = row['Gelation (25d)']['PBS Wash']['Stored in PBS Azide 0.01% at 4C']\n", + "\n", + "\n", " notes1 = row['Gelation (25d)']['PBS Wash']['Notes']\n", " notes2 = row['Gelation (25d)']['PBS Wash']['Notes.1']\n", " notes3 = row['Gelation (25d)']['PBS Wash']['Notes.2']\n", "\n", "\n", - "\n", - "\n", - "\n", + " specimen_procedures = []\n", + " for item in items:\n", + " print(item)\n", + " if pd.isna(item['start_date']) or pd.isna(item['end_date']):\n", + " continue\n", + " specimen_procedures.append(spec_maker.make_spec_procedure(item['start_date'], item['end_date'], item['procedure_type'], item['procedure_name']))\n", + " \n", + " print(specimen_procedures)\n", "\n" ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] } ], "metadata": { From 952d5d5351db906f680c4484537d2edc8f4c3fc3 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 7 Mar 2024 12:52:25 -0500 Subject: [PATCH 10/43] baseline functional --- .../MRI_ingest/output/test_mri_session.json | 40 ++++ scripts/MRI_ingest/scratch.ipynb | 219 ++++++++++++------ 2 files changed, 184 insertions(+), 75 deletions(-) create mode 100644 scripts/MRI_ingest/output/test_mri_session.json diff --git a/scripts/MRI_ingest/output/test_mri_session.json b/scripts/MRI_ingest/output/test_mri_session.json new file mode 100644 index 00000000..973e8f53 --- /dev/null +++ b/scripts/MRI_ingest/output/test_mri_session.json @@ -0,0 +1,40 @@ +{ + "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/mri_session.py", + "schema_version": "0.3.3", + "subject_id": "", + "session_start_time": "2024-03-07T12:51:29.218186", + "session_end_time": "2024-03-07T12:51:29.218186", + "experimenter_full_name": [ + "Mae" + ], + "protocol_id": "", + "iacuc_protocol": "", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "mri_scanner": { + "device_type": "Scanner", + "name": "test_scanner", + "serial_number": null, + "manufacturer": null, + "model": null, + "path_to_cad": null, + "port_index": null, + "additional_settings": {}, + "notes": null, + "scanner_location": "Fred Hutch", + "magnetic_strength": 7, + "magnetic_strength_unit": "T" + }, + "scans": [ + null, + null, + null, + null, + null, + null, + null + ], + "notes": "none" +} \ No newline at end of file diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb index d99e18c7..757354ed 100644 --- a/scripts/MRI_ingest/scratch.ipynb +++ b/scripts/MRI_ingest/scratch.ipynb @@ -195,7 +195,6 @@ "\n", " scans = []\n", " for scan in self.n_scans:\n", - " scan_data = self.metadata.read_scan(scan)\n", " scan_type = \"3D Scan\"\n", " if scan == setup_scan_number:\n", " scan_type = \"Set Up\"\n", @@ -203,6 +202,8 @@ " if scan == primary_scan_number:\n", " primary_scan = True\n", " scans.append(self.make_model_from_scan(scan, scan_type, primary_scan))\n", + " for scan in scans:\n", + " print(scan)\n", "\n", " return MriSession(\n", "\n", @@ -246,22 +247,46 @@ " subj_pos = 'Prone'\n", "\n", " scan_sequence = MriScanSequence.OTHER\n", + " notes = None\n", " if 'RARE' in self.cur_method['Method']:\n", " scan_sequence = MriScanSequence(self.cur_method['Method'])\n", + " else:\n", + " notes = f\"Scan sequence {self.cur_method['Method']} not recognized\"\n", "\n", " rare_factor = None\n", " if 'RareFactor' in self.cur_method.keys():\n", " rare_factor = self.cur_method['RareFactor']\n", "\n", + " if 'EffectiveTE' in self.cur_method.keys():\n", + " eff_echo_time = Decimal(self.cur_method['EffectiveTE'])\n", + " else:\n", + " eff_echo_time = None\n", + "\n", " print(f'orientation: {self.cur_visu_pars[\"VisuCoreOrientation\"]}')\n", " print(f'position: {self.cur_visu_pars[\"VisuCorePosition\"]}')\n", "\n", - " rotation=list(*self.cur_visu_pars['VisuCoreOrientation'])\n", - " if isinstance(rotation, np.ndarray):\n", - " rotation = rotation.tolist()\n", - " translation=list(*self.cur_visu_pars['VisuCorePosition'])\n", - " if isinstance(translation, np.ndarray):\n", - " translation = translation.tolist()\n", + "\n", + "\n", + " rotation=self.cur_visu_pars['VisuCoreOrientation']\n", + " if rotation.shape == (1,9):\n", + " rotation=Rotation3dTransform(rotation=rotation.tolist()[0])\n", + " else:\n", + " rotation = None\n", + " \n", + " \n", + " translation=self.cur_visu_pars['VisuCorePosition']\n", + "\n", + " if translation.shape == (1,3):\n", + " translation=Translation3dTransform(translation=translation.tolist()[0])\n", + " else:\n", + " translation = None\n", + "\n", + "\n", + " print(f'spat res: {self.cur_method[\"SpatResol\"]}')\n", + " scale=self.cur_method['SpatResol'].tolist()\n", + " while len(scale) < 3:\n", + " scale.append(0)\n", + " scale = Scale3dTransform(scale=scale)\n", "\n", " try:\n", " return MRIScan(\n", @@ -271,17 +296,17 @@ " scan_sequence_type=scan_sequence, # method ##$Method=RARE,\n", " rare_factor=rare_factor, # method ##$PVM_RareFactor=8,\n", " echo_time=self.cur_method['EchoTime'], # method ##$PVM_EchoTime=0.01,\n", - " effective_echo_time=Decimal(self.cur_method['EffectiveTE']), # method ##$EffectiveTE=(1)\n", + " effective_echo_time=eff_echo_time, # method ##$EffectiveTE=(1)\n", " # echo_time_unit=TimeUnit(), # what do we want here?\n", " repetition_time=self.cur_method['RepetitionTime'], # method ##$PVM_RepetitionTime=500,\n", " # repetition_time_unit=TimeUnit(), # ditto\n", - " vc_orientation=Rotation3dTransform(rotation=rotation),# visu_pars ##$VisuCoreOrientation=( 1, 9 )\n", - " vc_position=Translation3dTransform(translation=translation), # visu_pars ##$VisuCorePosition=( 1, 3 )\n", + " vc_orientation=rotation,# visu_pars ##$VisuCoreOrientation=( 1, 9 )\n", + " vc_position=translation, # visu_pars ##$VisuCorePosition=( 1, 3 )\n", " subject_position=SubjectPosition(subj_pos), # subject ##$SUBJECT_position=SUBJ_POS_Supine,\n", - " voxel_sizes=Scale3dTransform(scale=self.cur_method['SpatResol']), # method ##$PVM_SpatResol=( 3 )\n", + " voxel_sizes=scale, # method ##$PVM_SpatResol=( 3 )\n", " processing_steps=[],\n", " additional_scan_parameters={},\n", - " notes=\"\", # Where should we pull these?\n", + " notes=notes, # Where should we pull these?\n", " ) \n", " except Exception as e:\n", " print(traceback.format_exc())\n", @@ -303,7 +328,8 @@ "5.33333333333333\n", "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", "position: [[-6.1 -7.1 8.1]]\n", - "scan_index=5 scan_type='3D Scan' primary_scan=True scan_sequence_type='RARE' rare_factor=4 echo_time=Decimal('5.33333333333333') effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125') echo_time_unit= repetition_time=Decimal('500.0') repetition_time_unit= vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]) vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('8.1')]) subject_position='Supine' voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]) processing_steps=[] additional_scan_parameters=AindGeneric() notes=''\n" + "spat res: [0.5 0.4375 0.52 ]\n", + "scan_index=5 scan_type='3D Scan' primary_scan=True scan_sequence_type='RARE' rare_factor=4 echo_time=Decimal('5.33333333333333') effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125') echo_time_unit= repetition_time=Decimal('500.0') repetition_time_unit= vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]) vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('8.1')]) subject_position='Supine' voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]) processing_steps=[] additional_scan_parameters=AindGeneric() notes=None\n" ] } ], @@ -317,52 +343,6 @@ "cell_type": "code", "execution_count": 9, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "probes1\n" - ] - }, - { - "ename": "TypeError", - "evalue": "'str' object does not support item assignment", - "output_type": "error", - "traceback": [ - "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", - "\u001b[1;31mTypeError\u001b[0m Traceback (most recent call last)", - "Cell \u001b[1;32mIn[9], line 16\u001b[0m\n\u001b[0;32m 14\u001b[0m \u001b[38;5;28;01mfor\u001b[39;00m probe \u001b[38;5;129;01min\u001b[39;00m stuff:\n\u001b[0;32m 15\u001b[0m \u001b[38;5;28mprint\u001b[39m(probe)\n\u001b[1;32m---> 16\u001b[0m probe[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mto_replace\u001b[39m\u001b[38;5;124m'\u001b[39m] \u001b[38;5;241m=\u001b[39m \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mreplaced\u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 18\u001b[0m \u001b[38;5;28mprint\u001b[39m(stuff)\n", - "\u001b[1;31mTypeError\u001b[0m: 'str' object does not support item assignment" - ] - } - ], - "source": [ - "stuff = {\n", - " 'probes1': {\n", - " 'name': \"name\",\n", - " 'item_type': \"type\",\n", - " 'to_replace': \"to_replace\",\n", - " },\n", - " 'probes2': {\n", - " 'name': \"name\",\n", - " 'item_type': \"type\",\n", - " 'to_replace': \"to_replace\",\n", - " } \n", - "}\n", - "\n", - "for probe in stuff:\n", - " print(probe)\n", - " probe['to_replace'] = \"replaced\"\n", - "\n", - "print(stuff)\n", - "\n" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, "outputs": [ { "name": "stdout", @@ -377,20 +357,107 @@ " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", "position: [[-15. -15. 0.]\n", " [ 0. -15. 15.]\n", - " [-15. 0. 15.]]\n" - ] - }, - { - "ename": "TypeError", - "evalue": "list expected at most 1 argument, got 3", - "output_type": "error", - "traceback": [ - "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", - "\u001b[1;31mTypeError\u001b[0m Traceback (most recent call last)", - "Cell \u001b[1;32mIn[10], line 1\u001b[0m\n\u001b[1;32m----> 1\u001b[0m session \u001b[38;5;241m=\u001b[39m loader\u001b[38;5;241m.\u001b[39mload_mri_session([\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mMae\u001b[39m\u001b[38;5;124m\"\u001b[39m], \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m7\u001b[39m\u001b[38;5;124m\"\u001b[39m, \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m1\u001b[39m\u001b[38;5;124m\"\u001b[39m, ScannerLocation\u001b[38;5;241m.\u001b[39mFRED_HUTCH, MagneticStrength\u001b[38;5;241m.\u001b[39mMRI_7T)\n", - "Cell \u001b[1;32mIn[7], line 32\u001b[0m, in \u001b[0;36mMRILoader.load_mri_session\u001b[1;34m(self, experimenter, primary_scan_number, setup_scan_number, scan_location, magnet_strength)\u001b[0m\n\u001b[0;32m 30\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m scan \u001b[38;5;241m==\u001b[39m primary_scan_number:\n\u001b[0;32m 31\u001b[0m primary_scan \u001b[38;5;241m=\u001b[39m \u001b[38;5;28;01mTrue\u001b[39;00m\n\u001b[1;32m---> 32\u001b[0m scans\u001b[38;5;241m.\u001b[39mappend(\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mmake_model_from_scan(scan, scan_type, primary_scan))\n\u001b[0;32m 34\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m MriSession(\n\u001b[0;32m 35\u001b[0m \n\u001b[0;32m 36\u001b[0m subject_id\u001b[38;5;241m=\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m\"\u001b[39m,\n\u001b[1;32m (...)\u001b[0m\n\u001b[0;32m 53\u001b[0m notes\u001b[38;5;241m=\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mnone\u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 54\u001b[0m )\n", - "Cell \u001b[1;32mIn[7], line 86\u001b[0m, in \u001b[0;36mMRILoader.make_model_from_scan\u001b[1;34m(self, scan_index, scan_type, primary_scan)\u001b[0m\n\u001b[0;32m 83\u001b[0m \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124mf\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124morientation: \u001b[39m\u001b[38;5;132;01m{\u001b[39;00m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mcur_visu_pars[\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mVisuCoreOrientation\u001b[39m\u001b[38;5;124m\"\u001b[39m]\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m'\u001b[39m)\n\u001b[0;32m 84\u001b[0m \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124mf\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mposition: \u001b[39m\u001b[38;5;132;01m{\u001b[39;00m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mcur_visu_pars[\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mVisuCorePosition\u001b[39m\u001b[38;5;124m\"\u001b[39m]\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m'\u001b[39m)\n\u001b[1;32m---> 86\u001b[0m rotation\u001b[38;5;241m=\u001b[39m\u001b[38;5;28mlist\u001b[39m(\u001b[38;5;241m*\u001b[39m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mcur_visu_pars[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mVisuCoreOrientation\u001b[39m\u001b[38;5;124m'\u001b[39m])\n\u001b[0;32m 87\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28misinstance\u001b[39m(rotation, np\u001b[38;5;241m.\u001b[39mndarray):\n\u001b[0;32m 88\u001b[0m rotation \u001b[38;5;241m=\u001b[39m rotation\u001b[38;5;241m.\u001b[39mtolist()\n", - "\u001b[1;31mTypeError\u001b[0m: list expected at most 1 argument, got 3" + " [-15. 0. 15.]]\n", + "spat res: [0.234375 0.234375]\n", + "loading scan 2\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "5.49333333333333\n", + "orientation: [[1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", + " [1. 0. 0. 0. 1. 0. 0. 0. 1.]]\n", + "position: [[-11.1 -11. -7.2]\n", + " [-11.1 -11. -6.2]\n", + " [-11.1 -11. -5.2]\n", + " [-11.1 -11. -4.2]\n", + " [-11.1 -11. -3.2]\n", + " [-11.1 -11. -2.2]\n", + " [-11.1 -11. -1.2]\n", + " [-11.1 -11. -0.2]\n", + " [-11.1 -11. 0.8]\n", + " [-11.1 -11. 1.8]\n", + " [-11.1 -11. 2.8]\n", + " [-11.1 -11. 3.8]\n", + " [-11.1 -11. 4.8]\n", + " [-11.1 -11. 5.8]\n", + " [-11.1 -11. 6.8]]\n", + "spat res: [0.09765625 0.1953125 ]\n", + "loading scan 3\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "5.49333333333333\n", + "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", + " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", + "position: [[-11.3 5.4 12.5]\n", + " [-11.3 4.4 12.5]\n", + " [-11.3 3.4 12.5]\n", + " [-11.3 2.4 12.5]\n", + " [-11.3 1.4 12.5]\n", + " [-11.3 0.4 12.5]\n", + " [-11.3 -0.6 12.5]\n", + " [-11.3 -1.6 12.5]\n", + " [-11.3 -2.6 12.5]\n", + " [-11.3 -3.6 12.5]\n", + " [-11.3 -4.6 12.5]\n", + " [-11.3 -5.6 12.5]\n", + " [-11.3 -6.6 12.5]\n", + " [-11.3 -7.6 12.5]\n", + " [-11.3 -8.6 12.5]]\n", + "spat res: [0.09765625 0.1953125 ]\n", + "loading scan 4\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "5.33333333333333\n", + "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", + "position: [[-6.1 -7.1 8.4]]\n", + "spat res: [0.5 0.4375 0.52 ]\n", + "loading scan 5\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "5.33333333333333\n", + "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", + "position: [[-6.1 -7.1 8.1]]\n", + "spat res: [0.5 0.4375 0.52 ]\n", + "loading scan 6\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "5.33333333333333\n", + "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", + "position: [[-6.1 -7.1 7.9]]\n", + "spat res: [0.5 0.4375 0.52 ]\n", + "loading scan 7\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "dict_keys(['acqp', 'method', 'recons'])\n", + "5.33333333333333\n", + "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", + "position: [[-6.1 -7. 7.9]]\n", + "spat res: [0.1 0.1 0.1]\n", + "[MRIScan(scan_index=1, scan_type='Set Up', primary_scan=False, scan_sequence_type='Other', rare_factor=None, echo_time=Decimal('3.42'), effective_echo_time=None, echo_time_unit=, repetition_time=Decimal('100.0'), repetition_time_unit=, vc_orientation=None, vc_position=None, subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.234375'), Decimal('0.234375'), Decimal('0')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes='Scan sequence FLASH not recognized'), MRIScan(scan_index=2, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=8, echo_time=Decimal('5.49333333333333'), effective_echo_time=Decimal('5.49333333333332962666872845147736370563507080078125'), echo_time_unit=, repetition_time=Decimal('2000.0'), repetition_time_unit=, vc_orientation=None, vc_position=None, subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.09765625'), Decimal('0.1953125'), Decimal('0')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=3, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=8, echo_time=Decimal('5.49333333333333'), effective_echo_time=Decimal('5.49333333333332962666872845147736370563507080078125'), echo_time_unit=, repetition_time=Decimal('2000.0'), repetition_time_unit=, vc_orientation=None, vc_position=None, subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.09765625'), Decimal('0.1953125'), Decimal('0')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=4, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=4, echo_time=Decimal('5.33333333333333'), effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125'), echo_time_unit=, repetition_time=Decimal('500.0'), repetition_time_unit=, vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]), vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('8.4')]), subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=5, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=4, echo_time=Decimal('5.33333333333333'), effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125'), echo_time_unit=, repetition_time=Decimal('500.0'), repetition_time_unit=, vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]), vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('8.1')]), subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=6, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=4, echo_time=Decimal('5.33333333333333'), effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125'), echo_time_unit=, repetition_time=Decimal('500.0'), repetition_time_unit=, vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]), vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('7.9')]), subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=7, scan_type='3D Scan', primary_scan=True, scan_sequence_type='RARE', rare_factor=4, echo_time=Decimal('5.33333333333333'), effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125'), echo_time_unit=, repetition_time=Decimal('500.0'), repetition_time_unit=, vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]), vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.0'), Decimal('7.9')]), subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.1'), Decimal('0.1'), Decimal('0.1')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None)]\n" ] } ], @@ -400,10 +467,12 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 10, "metadata": {}, "outputs": [], - "source": [] + "source": [ + "session.write_standard_file(output_directory=Path(\"./output\"), prefix=Path(\"test\"))" + ] }, { "cell_type": "code", From e941bb8c915590b9a57846bc915847c32bc070b4 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Fri, 8 Mar 2024 15:21:58 -0500 Subject: [PATCH 11/43] commit --- .../MRI_ingest/output/test_mri_session.json | 4 +- scripts/MRI_ingest/scratch.ipynb | 151 +----------------- 2 files changed, 9 insertions(+), 146 deletions(-) diff --git a/scripts/MRI_ingest/output/test_mri_session.json b/scripts/MRI_ingest/output/test_mri_session.json index 973e8f53..fc09829e 100644 --- a/scripts/MRI_ingest/output/test_mri_session.json +++ b/scripts/MRI_ingest/output/test_mri_session.json @@ -2,8 +2,8 @@ "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/mri_session.py", "schema_version": "0.3.3", "subject_id": "", - "session_start_time": "2024-03-07T12:51:29.218186", - "session_end_time": "2024-03-07T12:51:29.218186", + "session_start_time": "2024-03-07T13:02:40.967578", + "session_end_time": "2024-03-07T13:02:40.967578", "experimenter_full_name": [ "Mae" ], diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb index 757354ed..7ad26c3a 100644 --- a/scripts/MRI_ingest/scratch.ipynb +++ b/scripts/MRI_ingest/scratch.ipynb @@ -201,9 +201,10 @@ " primary_scan = False\n", " if scan == primary_scan_number:\n", " primary_scan = True\n", - " scans.append(self.make_model_from_scan(scan, scan_type, primary_scan))\n", - " for scan in scans:\n", - " print(scan)\n", + " new_scan = self.make_model_from_scan(scan, scan_type, primary_scan)\n", + " logging.info(f'loaded scan {new_scan}')\n", + " scans.append(new_scan)\n", + "\n", "\n", " return MriSession(\n", "\n", @@ -229,17 +230,11 @@ " \n", "\n", " def make_model_from_scan(self, scan_index: str, scan_type, primary_scan: bool) -> MRIScan:\n", - " print(f'loading scan {scan_index}')\n", - " print(f'{self.metadata.read_scan(scan_index).keys()}')\n", - " \n", + " logging.info(f'loading scan {scan_index}') \n", "\n", - " \n", " self.cur_visu_pars = self.metadata.scan_data[scan_index]['recons']['1']['visu_pars']\n", " self.cur_method = self.metadata.scan_data[scan_index]['method']\n", "\n", - "\n", - " print(self.metadata.scan_data[scan_index].keys())\n", - " print(self.cur_method['EchoTime'])\n", " subj_pos = self.metadata.subject_data[\"SUBJECT_position\"]\n", " if 'supine' in subj_pos.lower():\n", " subj_pos = 'Supine'\n", @@ -262,18 +257,12 @@ " else:\n", " eff_echo_time = None\n", "\n", - " print(f'orientation: {self.cur_visu_pars[\"VisuCoreOrientation\"]}')\n", - " print(f'position: {self.cur_visu_pars[\"VisuCorePosition\"]}')\n", - "\n", - "\n", - "\n", " rotation=self.cur_visu_pars['VisuCoreOrientation']\n", " if rotation.shape == (1,9):\n", " rotation=Rotation3dTransform(rotation=rotation.tolist()[0])\n", " else:\n", " rotation = None\n", " \n", - " \n", " translation=self.cur_visu_pars['VisuCorePosition']\n", "\n", " if translation.shape == (1,3):\n", @@ -281,8 +270,6 @@ " else:\n", " translation = None\n", "\n", - "\n", - " print(f'spat res: {self.cur_method[\"SpatResol\"]}')\n", " scale=self.cur_method['SpatResol'].tolist()\n", " while len(scale) < 3:\n", " scale.append(0)\n", @@ -309,7 +296,7 @@ " notes=notes, # Where should we pull these?\n", " ) \n", " except Exception as e:\n", - " print(traceback.format_exc())\n", + " logging.error(traceback.format_exc())\n", " logging.error(f'Error loading scan {scan_index}: {e}') " ] }, @@ -322,13 +309,6 @@ "name": "stdout", "output_type": "stream", "text": [ - "loading scan 5\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "5.33333333333333\n", - "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", - "position: [[-6.1 -7.1 8.1]]\n", - "spat res: [0.5 0.4375 0.52 ]\n", "scan_index=5 scan_type='3D Scan' primary_scan=True scan_sequence_type='RARE' rare_factor=4 echo_time=Decimal('5.33333333333333') effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125') echo_time_unit= repetition_time=Decimal('500.0') repetition_time_unit= vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]) vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('8.1')]) subject_position='Supine' voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]) processing_steps=[] additional_scan_parameters=AindGeneric() notes=None\n" ] } @@ -343,124 +323,7 @@ "cell_type": "code", "execution_count": 9, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "loading scan 1\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "3.42\n", - "orientation: [[ 1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [ 0. 1. 0. 0. 0. -1. -1. 0. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", - "position: [[-15. -15. 0.]\n", - " [ 0. -15. 15.]\n", - " [-15. 0. 15.]]\n", - "spat res: [0.234375 0.234375]\n", - "loading scan 2\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "5.49333333333333\n", - "orientation: [[1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]\n", - " [1. 0. 0. 0. 1. 0. 0. 0. 1.]]\n", - "position: [[-11.1 -11. -7.2]\n", - " [-11.1 -11. -6.2]\n", - " [-11.1 -11. -5.2]\n", - " [-11.1 -11. -4.2]\n", - " [-11.1 -11. -3.2]\n", - " [-11.1 -11. -2.2]\n", - " [-11.1 -11. -1.2]\n", - " [-11.1 -11. -0.2]\n", - " [-11.1 -11. 0.8]\n", - " [-11.1 -11. 1.8]\n", - " [-11.1 -11. 2.8]\n", - " [-11.1 -11. 3.8]\n", - " [-11.1 -11. 4.8]\n", - " [-11.1 -11. 5.8]\n", - " [-11.1 -11. 6.8]]\n", - "spat res: [0.09765625 0.1953125 ]\n", - "loading scan 3\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "5.49333333333333\n", - "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]\n", - " [ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", - "position: [[-11.3 5.4 12.5]\n", - " [-11.3 4.4 12.5]\n", - " [-11.3 3.4 12.5]\n", - " [-11.3 2.4 12.5]\n", - " [-11.3 1.4 12.5]\n", - " [-11.3 0.4 12.5]\n", - " [-11.3 -0.6 12.5]\n", - " [-11.3 -1.6 12.5]\n", - " [-11.3 -2.6 12.5]\n", - " [-11.3 -3.6 12.5]\n", - " [-11.3 -4.6 12.5]\n", - " [-11.3 -5.6 12.5]\n", - " [-11.3 -6.6 12.5]\n", - " [-11.3 -7.6 12.5]\n", - " [-11.3 -8.6 12.5]]\n", - "spat res: [0.09765625 0.1953125 ]\n", - "loading scan 4\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "5.33333333333333\n", - "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", - "position: [[-6.1 -7.1 8.4]]\n", - "spat res: [0.5 0.4375 0.52 ]\n", - "loading scan 5\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "5.33333333333333\n", - "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", - "position: [[-6.1 -7.1 8.1]]\n", - "spat res: [0.5 0.4375 0.52 ]\n", - "loading scan 6\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "5.33333333333333\n", - "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", - "position: [[-6.1 -7.1 7.9]]\n", - "spat res: [0.5 0.4375 0.52 ]\n", - "loading scan 7\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "dict_keys(['acqp', 'method', 'recons'])\n", - "5.33333333333333\n", - "orientation: [[ 1. 0. 0. 0. 0. -1. 0. 1. 0.]]\n", - "position: [[-6.1 -7. 7.9]]\n", - "spat res: [0.1 0.1 0.1]\n", - "[MRIScan(scan_index=1, scan_type='Set Up', primary_scan=False, scan_sequence_type='Other', rare_factor=None, echo_time=Decimal('3.42'), effective_echo_time=None, echo_time_unit=, repetition_time=Decimal('100.0'), repetition_time_unit=, vc_orientation=None, vc_position=None, subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.234375'), Decimal('0.234375'), Decimal('0')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes='Scan sequence FLASH not recognized'), MRIScan(scan_index=2, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=8, echo_time=Decimal('5.49333333333333'), effective_echo_time=Decimal('5.49333333333332962666872845147736370563507080078125'), echo_time_unit=, repetition_time=Decimal('2000.0'), repetition_time_unit=, vc_orientation=None, vc_position=None, subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.09765625'), Decimal('0.1953125'), Decimal('0')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=3, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=8, echo_time=Decimal('5.49333333333333'), effective_echo_time=Decimal('5.49333333333332962666872845147736370563507080078125'), echo_time_unit=, repetition_time=Decimal('2000.0'), repetition_time_unit=, vc_orientation=None, vc_position=None, subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.09765625'), Decimal('0.1953125'), Decimal('0')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=4, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=4, echo_time=Decimal('5.33333333333333'), effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125'), echo_time_unit=, repetition_time=Decimal('500.0'), repetition_time_unit=, vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]), vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('8.4')]), subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=5, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=4, echo_time=Decimal('5.33333333333333'), effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125'), echo_time_unit=, repetition_time=Decimal('500.0'), repetition_time_unit=, vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]), vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('8.1')]), subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=6, scan_type='3D Scan', primary_scan=False, scan_sequence_type='RARE', rare_factor=4, echo_time=Decimal('5.33333333333333'), effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125'), echo_time_unit=, repetition_time=Decimal('500.0'), repetition_time_unit=, vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]), vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.1'), Decimal('7.9')]), subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.5'), Decimal('0.4375'), Decimal('0.52')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None), MRIScan(scan_index=7, scan_type='3D Scan', primary_scan=True, scan_sequence_type='RARE', rare_factor=4, echo_time=Decimal('5.33333333333333'), effective_echo_time=Decimal('10.6666666666666998253276688046753406524658203125'), echo_time_unit=, repetition_time=Decimal('500.0'), repetition_time_unit=, vc_orientation=Rotation3dTransform(type='rotation', rotation=[Decimal('1.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('0.0'), Decimal('-1.0'), Decimal('0.0'), Decimal('1.0'), Decimal('0.0')]), vc_position=Translation3dTransform(type='translation', translation=[Decimal('-6.1'), Decimal('-7.0'), Decimal('7.9')]), subject_position='Supine', voxel_sizes=Scale3dTransform(type='scale', scale=[Decimal('0.1'), Decimal('0.1'), Decimal('0.1')]), processing_steps=[], additional_scan_parameters=AindGeneric(), notes=None)]\n" - ] - } - ], + "outputs": [], "source": [ "session = loader.load_mri_session([\"Mae\"], \"7\", \"1\", ScannerLocation.FRED_HUTCH, MagneticStrength.MRI_7T)" ] From 514536154938b8b73e42928fe07a28b04706b68e Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Fri, 8 Mar 2024 15:57:13 -0500 Subject: [PATCH 12/43] support optional change --- .../MRI_ingest/output/test_mri_session.json | 4 +-- scripts/MRI_ingest/scratch.ipynb | 29 ++++++++++--------- 2 files changed, 17 insertions(+), 16 deletions(-) diff --git a/scripts/MRI_ingest/output/test_mri_session.json b/scripts/MRI_ingest/output/test_mri_session.json index fc09829e..be03757c 100644 --- a/scripts/MRI_ingest/output/test_mri_session.json +++ b/scripts/MRI_ingest/output/test_mri_session.json @@ -2,8 +2,8 @@ "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/mri_session.py", "schema_version": "0.3.3", "subject_id": "", - "session_start_time": "2024-03-07T13:02:40.967578", - "session_end_time": "2024-03-07T13:02:40.967578", + "session_start_time": "2024-03-08T15:27:22.197628", + "session_end_time": "2024-03-08T15:27:22.197628", "experimenter_full_name": [ "Mae" ], diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb index 7ad26c3a..91a95c31 100644 --- a/scripts/MRI_ingest/scratch.ipynb +++ b/scripts/MRI_ingest/scratch.ipynb @@ -2,7 +2,7 @@ "cells": [ { "cell_type": "code", - "execution_count": 1, + "execution_count": 30, "metadata": {}, "outputs": [], "source": [ @@ -18,7 +18,7 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": 31, "metadata": {}, "outputs": [], "source": [ @@ -38,7 +38,7 @@ }, { "cell_type": "code", - "execution_count": 3, + "execution_count": 32, "metadata": {}, "outputs": [ { @@ -80,7 +80,7 @@ }, { "cell_type": "code", - "execution_count": 4, + "execution_count": 33, "metadata": {}, "outputs": [ { @@ -110,7 +110,7 @@ }, { "cell_type": "code", - "execution_count": 5, + "execution_count": 34, "metadata": {}, "outputs": [ { @@ -137,7 +137,7 @@ }, { "cell_type": "code", - "execution_count": 6, + "execution_count": 35, "metadata": {}, "outputs": [], "source": [ @@ -167,7 +167,7 @@ }, { "cell_type": "code", - "execution_count": 7, + "execution_count": 36, "metadata": {}, "outputs": [], "source": [ @@ -205,7 +205,7 @@ " logging.info(f'loaded scan {new_scan}')\n", " scans.append(new_scan)\n", "\n", - "\n", + " logging.info(f'loaded scans: {scans}')\n", " return MriSession(\n", "\n", " subject_id=\"\",\n", @@ -271,9 +271,10 @@ " translation = None\n", "\n", " scale=self.cur_method['SpatResol'].tolist()\n", - " while len(scale) < 3:\n", - " scale.append(0)\n", - " scale = Scale3dTransform(scale=scale)\n", + " if len(scale) != 3:\n", + " scale = None\n", + " else:\n", + " scale = Scale3dTransform(scale=scale)\n", "\n", " try:\n", " return MRIScan(\n", @@ -302,7 +303,7 @@ }, { "cell_type": "code", - "execution_count": 8, + "execution_count": 37, "metadata": {}, "outputs": [ { @@ -321,7 +322,7 @@ }, { "cell_type": "code", - "execution_count": 9, + "execution_count": 38, "metadata": {}, "outputs": [], "source": [ @@ -330,7 +331,7 @@ }, { "cell_type": "code", - "execution_count": 10, + "execution_count": 39, "metadata": {}, "outputs": [], "source": [ From 8507a282f01a6a7899e7728df02c295d2466cf60 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Mon, 11 Mar 2024 12:38:09 -0400 Subject: [PATCH 13/43] Update scratch.ipynb --- scripts/MRI_ingest/scratch.ipynb | 1 - 1 file changed, 1 deletion(-) diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb index 91a95c31..f2ea810f 100644 --- a/scripts/MRI_ingest/scratch.ipynb +++ b/scripts/MRI_ingest/scratch.ipynb @@ -207,7 +207,6 @@ "\n", " logging.info(f'loaded scans: {scans}')\n", " return MriSession(\n", - "\n", " subject_id=\"\",\n", " session_start_time=datetime.now(), \n", " session_end_time=datetime.now(),\n", From 332c3fbb1a31a01ed3181bc10897648bca601880 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Mon, 11 Mar 2024 14:34:25 -0400 Subject: [PATCH 14/43] tests --- .../MRI_ingest/output/test_mri_session.json | 4 +- scripts/MRI_ingest/scratch.ipynb | 46 +++++++++++++++---- 2 files changed, 38 insertions(+), 12 deletions(-) diff --git a/scripts/MRI_ingest/output/test_mri_session.json b/scripts/MRI_ingest/output/test_mri_session.json index be03757c..58ccef97 100644 --- a/scripts/MRI_ingest/output/test_mri_session.json +++ b/scripts/MRI_ingest/output/test_mri_session.json @@ -2,8 +2,8 @@ "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/mri_session.py", "schema_version": "0.3.3", "subject_id": "", - "session_start_time": "2024-03-08T15:27:22.197628", - "session_end_time": "2024-03-08T15:27:22.197628", + "session_start_time": "2024-03-11T14:32:10.066700", + "session_end_time": "2024-03-11T14:32:10.066700", "experimenter_full_name": [ "Mae" ], diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb index f2ea810f..43b55dc7 100644 --- a/scripts/MRI_ingest/scratch.ipynb +++ b/scripts/MRI_ingest/scratch.ipynb @@ -2,7 +2,7 @@ "cells": [ { "cell_type": "code", - "execution_count": 30, + "execution_count": 1, "metadata": {}, "outputs": [], "source": [ @@ -18,7 +18,7 @@ }, { "cell_type": "code", - "execution_count": 31, + "execution_count": 2, "metadata": {}, "outputs": [], "source": [ @@ -38,7 +38,7 @@ }, { "cell_type": "code", - "execution_count": 32, + "execution_count": 3, "metadata": {}, "outputs": [ { @@ -80,7 +80,7 @@ }, { "cell_type": "code", - "execution_count": 33, + "execution_count": 4, "metadata": {}, "outputs": [ { @@ -110,7 +110,7 @@ }, { "cell_type": "code", - "execution_count": 34, + "execution_count": 5, "metadata": {}, "outputs": [ { @@ -137,7 +137,7 @@ }, { "cell_type": "code", - "execution_count": 35, + "execution_count": 6, "metadata": {}, "outputs": [], "source": [ @@ -167,7 +167,7 @@ }, { "cell_type": "code", - "execution_count": 36, + "execution_count": 7, "metadata": {}, "outputs": [], "source": [ @@ -205,7 +205,33 @@ " logging.info(f'loaded scan {new_scan}')\n", " scans.append(new_scan)\n", "\n", + " # scanner_dict = {\n", + " # \"name\":\"test_scanner\",\n", + " # \"scanner_location\":scan_location,\n", + " # \"magnetic_strength\":magnet_strength, \n", + " # \"magnetic_strength_unit\":\"T\", \n", + " # }\n", + "\n", + " # session_dict = {\n", + " # \"subject_id\":\"\",\n", + " # \"session_start_time\":datetime.now(), \n", + " # \"session_end_time\":datetime.now(),\n", + " # \"experimenter_full_name\":experimenter, \n", + " # \"protocol_id\":\"\",\n", + " # \"iacuc_protocol\":\"\",\n", + " # # animal_weight_prior=,\n", + " # # animal_weight_post=,\n", + " # # weight_unit=, \n", + " # # anaesthesia=,\n", + " # \"mri_scanner\": scanner_dict,\n", + " # \"scans\":scans,\n", + " # \"notes\":\"none\"\n", + " # }\n", + "\n", + "\n", + " # logging.info(f'loaded session: {session_dict}')\n", " logging.info(f'loaded scans: {scans}')\n", + " # return MriSession.model_validate(session_dict)\n", " return MriSession(\n", " subject_id=\"\",\n", " session_start_time=datetime.now(), \n", @@ -302,7 +328,7 @@ }, { "cell_type": "code", - "execution_count": 37, + "execution_count": 8, "metadata": {}, "outputs": [ { @@ -321,7 +347,7 @@ }, { "cell_type": "code", - "execution_count": 38, + "execution_count": 9, "metadata": {}, "outputs": [], "source": [ @@ -330,7 +356,7 @@ }, { "cell_type": "code", - "execution_count": 39, + "execution_count": 11, "metadata": {}, "outputs": [], "source": [ From aacd2d57ac85a59d6c1a27120191f366edb5b74b Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Tue, 12 Mar 2024 15:22:22 -0400 Subject: 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scripts/Exaspim_ingest/ingest_exaspim.ipynb | 1516 ++++++++++++++----- 1 file changed, 1108 insertions(+), 408 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index 8da161de..8f3f21f5 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -2,9 +2,18 @@ "cells": [ { "cell_type": "code", - "execution_count": 1, + "execution_count": 6, "metadata": {}, - "outputs": [], + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\openpyxl\\styles\\stylesheet.py:226: UserWarning: Workbook contains no default style, apply openpyxl's default\n", + " warn(\"Workbook contains no default style, apply openpyxl's default\")\n" + ] + } + ], "source": [ "import pandas as pd\n", "import requests\n", @@ -17,124 +26,1060 @@ "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, Immunolabeling, HCRSeries\n", "\n", "\n", - "base = pd.read_excel(\"./ExM Sample Tracking.xlsx\", sheet_name=\"ExM Tissue Processing\", header=[0,1,2], converters={})\n" + "base = pd.read_excel(\"./ExM Sample Tracking smartsheet.xlsx\", sheet_name=\"ExM Sample Tracking\", header=[0], converters={})\n" ] }, { "cell_type": "code", - "execution_count": 2, + "execution_count": 9, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - " priority # Status Processed By: \\\n", - " Unnamed: 0_level_1 Unnamed: 1_level_1 Unnamed: 2_level_1 Unnamed: 3_level_1 \n", - " Unnamed: 0_level_2 Unnamed: 1_level_2 Unnamed: 2_level_2 Unnamed: 3_level_2 \n", - "0 NaN 1.0 NaN NDO \n", - "1 NaN 2.0 NaN NDO \n", - "2 NaN 3.0 NaN NDO \n", - "3 NaN 4.0 NaN NDO \n", - "4 NaN 5.0 NaN NDO \n", - "\n", - " Sample Genotype \\\n", - " Unnamed: 4_level_1 Unnamed: 5_level_1 \n", - " Unnamed: 4_level_2 Unnamed: 5_level_2 \n", - "0 576404 Snap25-IRES2-Cre; Slc17a7-IRES2-FlpO-neo-5764... \n", - "1 609105 Slc17a6-IRES-Cre \n", - "2 609107 Slc17a6-IRES-Cre \n", - "3 609281 Slc17a6-IRES-Cre \n", - "4 614978 Slc17a6-IRES-Cre \n", - "\n", - " Label Age of Injection Post-Fix \\\n", - " Unnamed: 6_level_1 Unnamed: 7_level_1 Unnamed: 8_level_1 \n", - " Unnamed: 6_level_2 Unnamed: 7_level_2 Unnamed: 8_level_2 \n", - "0 NaN NaN PBS Azide 0.01% \n", - "1 GFP 31 PBS Azide 0.01% \n", - "2 GFP 31 PBS Azide 0.01% \n", - "3 GFP 33 PBS Azide 0.01% \n", - "4 tdT 32 PBS Azide 0.01% \n", - "\n", - " DCM Delipidation (8-10d) ... Gelation (25d) Gelation (25d) \\\n", - " Unnamed: 9_level_1 ... Gelation + ProK RT Gelation + Add'l ProK 37C \n", - " Date Started ... TIme Date Started \n", - "0 2021-10-01 00:00:00 ... 2 days (hemi) 2021-11-25 \n", - "1 2022-01-21 00:00:00 ... 5 days 2022-05-22 \n", - "2 2022-04-12 00:00:00 ... 6 days 2022-08-08 \n", - "3 2022-04-12 00:00:00 ... 6 days 2022-08-08 \n", - "4 2022-04-12 00:00:00 ... 6 days 2022-08-08 \n", - "\n", - " Gelation (25d) Gelation (25d) Gelation (25d) \\\n", - " Gelation + Add'l ProK 37C Gelation + Add'l ProK 37C PBS Wash \n", - " Date Finished Time Date Started.1 \n", - "0 2021-12-01 6 days 2021-12-01 \n", - "1 2022-05-30 8 days 2022-05-30 \n", - "2 2022-08-15 7 days 2022-08-16 \n", - "3 2022-08-15 7 days 2022-08-16 \n", - "4 2022-08-15 7 days 2022-08-16 \n", - "\n", - " Gelation (25d) Gelation (25d) \\\n", - " PBS Wash PBS Wash \n", - " Date Finished.1 Stored in PBS Azide 0.01% at 4C \n", - "0 2021-12-03 ü \n", - "1 2022-06-02 ü \n", - "2 2022-08-18 ü \n", - "3 2022-08-18 ü \n", - "4 2022-08-18 ü \n", - "\n", - " Gelation (25d) \\\n", - " PBS Wash \n", - " Notes \n", - "0 5.0 mm Height mold \n", - "1 6.0mm H mold. Too large. Imaged, labelling n... \n", - "2 5.5mm H mold \n", - "3 5.5mm H mold \n", - "4 5.5mm H mold \n", - "\n", - " Gelation (25d) \\\n", - " PBS Wash \n", - " Notes.1 \n", - "0 Hemi-Brain \n", - "1 Whole-Brain \n", - "2 Whole-Brain. Started Expansion in 0.05x SSC 8/... \n", - "3 Whole-Brain \n", - "4 Whole-Brain \n", - "\n", - " Gelation (25d) \n", - " PBS Wash \n", - " Notes.2 \n", - "0 NaN \n", - "1 NaN \n", - "2 Stained in Cytrax Orange, in 0.05x SSC: 8/25-9... \n", - "3 NaN \n", - "4 NaN \n", - "\n", - "[5 rows x 35 columns]\n" + "Index(['Auto', 'Submitted Priority', 'TRUE Priority', '#', 'External Sample',\n", + " 'Status', 'Processing Lead', 'Sample', 'Genotype', 'Label',\n", + " 'Age of Injection', 'tTA Virus Dose', 'DCM Delipidation Start',\n", + " 'DCM Delipidation End', 'SBiP Delipidation Start',\n", + " 'SBiP Delipidation End', 'Immuno: Primary Antibody',\n", + " 'Mass of Primary Antibody used per Brain (ug)',\n", + " 'Primary Antibody Catalog #', 'Primary Antibody Lot #',\n", + " 'Primary Antibody RRID', 'Immuno: Primary Ab Start Date',\n", + " 'Immuno Secondary', 'Mass of Secondary Antibody used per Brain (ug)',\n", + " 'Secondary Antibody Catalog #', 'Secondary Antibody Lot #',\n", + " 'Secondary Antibody RRID', 'Fluorophore',\n", + " 'Immuno: Secondary Ab Start Date', 'Gelation: MBS Start',\n", + " 'Gelation: MBS End', 'Gelation: AcX Start', 'Gelation: AcX End',\n", + " 'Gelation: PBS Wash Start', 'Gelation: PBS Wash End',\n", + " 'Gelation: Stock X + VA-044 Equilibration Start',\n", + " 'Gelation: Stock X + VA-044 Equilibration End',\n", + " 'Gelation + ProK RT Start', 'Gelation + ProK RT End',\n", + " 'Duration (days)', 'Gelation + Add'l ProK 37C Start',\n", + " 'Gelation + Add'l ProK 37C End',\n", + " 'Duration (days) Gelation + Add'l ProK 37C', 'PBS Wash Start',\n", + " 'PBS Wash End', 'Date of Storage in PBS Az 0.05% @4C',\n", + " 'Expansion Start Date', 'Expansion End Date', 'Notes', 'Notes II',\n", + " 'Notes III', 'Column34'],\n", + " dtype='object')\n" ] } ], "source": [ "with pd.option_context(\"display.multi_sparse\", False):\n", - " print(base.head())\n", + " print(base.columns)\n", " " ] }, { "cell_type": "code", - "execution_count": 3, + "execution_count": 17, "metadata": {}, - "outputs": [], + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "576404\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'576404'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "609105\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609105'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "609107\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609107'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "609281\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609281'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "614978\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'614978'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "614980\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'614980'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "615296\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'615296'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "603033\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'603033'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "618584\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'618584'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "146\n", + "620631\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'620631'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "620629\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'620629'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648860\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648860'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648861\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648861'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648858\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648858'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648862\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648862'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648077\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648077'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648079\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648079'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648698\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648698'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648699\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648699'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648700\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648700'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648696\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648696'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648695\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648695'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648697\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648697'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "651324\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651324'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "651327\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651327'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "650008\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650008'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "650009\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650009'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "650010\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650010'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "650011\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650011'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "652779\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652779'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "652781\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652781'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648434\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648434'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648435\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648435'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "648436\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648436'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "651305\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651305'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653432\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653432'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "nan\n", + "nan\n", + "653430\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653430'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "nan\n", + "653431\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653431'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "nan\n", + "653980\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653980'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "654727\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654727'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653981\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653981'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653159\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653159'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653158\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653158'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "658734\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658734'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "658735\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658735'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "613814\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'613814'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "618583\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'618583'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "Z13288-QN22-26-036\n", + "659146\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'659146'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "653153\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653153'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660629\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660629'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660630\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660630'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "657676\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'657676'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660950\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660950'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "651895\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651895'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "654306\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654306'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "661300\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'661300'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660949\n", + "There was an error retrieving records from one or more of the databases.\n", + "651897\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651897'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "654308\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654308'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "665470\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665470'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "664761\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'664761'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "665465\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665465'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "665082\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665082'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "665081\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665081'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "652441\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652441'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "652445\n", + "Validation Errors: 5 validation errors for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", + " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", + " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", + " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", + "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", + " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", + "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652445'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660625\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660625'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "660627\n", + "Validation Errors: 1 validation error for Procedures\n", + "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", + " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660627'}}, input_type=dict]\n", + " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", + "516429\n" + ] + }, + { + "ename": "JSONDecodeError", + "evalue": "Expecting value: line 1 column 1 (char 0)", + "output_type": "error", + "traceback": [ + "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", + "\u001b[1;31mJSONDecodeError\u001b[0m Traceback (most recent call last)", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\requests\\models.py:971\u001b[0m, in \u001b[0;36mResponse.json\u001b[1;34m(self, **kwargs)\u001b[0m\n\u001b[0;32m 970\u001b[0m \u001b[38;5;28;01mtry\u001b[39;00m:\n\u001b[1;32m--> 971\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m complexjson\u001b[38;5;241m.\u001b[39mloads(\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mtext, \u001b[38;5;241m*\u001b[39m\u001b[38;5;241m*\u001b[39mkwargs)\n\u001b[0;32m 972\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m JSONDecodeError \u001b[38;5;28;01mas\u001b[39;00m e:\n\u001b[0;32m 973\u001b[0m \u001b[38;5;66;03m# Catch JSON-related errors and raise as requests.JSONDecodeError\u001b[39;00m\n\u001b[0;32m 974\u001b[0m \u001b[38;5;66;03m# This aliases json.JSONDecodeError and simplejson.JSONDecodeError\u001b[39;00m\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\json\\__init__.py:346\u001b[0m, in \u001b[0;36mloads\u001b[1;34m(s, cls, object_hook, parse_float, parse_int, parse_constant, object_pairs_hook, **kw)\u001b[0m\n\u001b[0;32m 343\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m (\u001b[38;5;28mcls\u001b[39m \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m object_hook \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m\n\u001b[0;32m 344\u001b[0m parse_int \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m parse_float \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m\n\u001b[0;32m 345\u001b[0m parse_constant \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m object_pairs_hook \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m \u001b[38;5;129;01mnot\u001b[39;00m kw):\n\u001b[1;32m--> 346\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m _default_decoder\u001b[38;5;241m.\u001b[39mdecode(s)\n\u001b[0;32m 347\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28mcls\u001b[39m \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m:\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\json\\decoder.py:337\u001b[0m, in \u001b[0;36mJSONDecoder.decode\u001b[1;34m(self, s, _w)\u001b[0m\n\u001b[0;32m 333\u001b[0m \u001b[38;5;250m\u001b[39m\u001b[38;5;124;03m\"\"\"Return the Python representation of ``s`` (a ``str`` instance\u001b[39;00m\n\u001b[0;32m 334\u001b[0m \u001b[38;5;124;03mcontaining a JSON document).\u001b[39;00m\n\u001b[0;32m 335\u001b[0m \n\u001b[0;32m 336\u001b[0m \u001b[38;5;124;03m\"\"\"\u001b[39;00m\n\u001b[1;32m--> 337\u001b[0m obj, end \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mraw_decode(s, idx\u001b[38;5;241m=\u001b[39m_w(s, \u001b[38;5;241m0\u001b[39m)\u001b[38;5;241m.\u001b[39mend())\n\u001b[0;32m 338\u001b[0m end \u001b[38;5;241m=\u001b[39m _w(s, end)\u001b[38;5;241m.\u001b[39mend()\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\json\\decoder.py:355\u001b[0m, in \u001b[0;36mJSONDecoder.raw_decode\u001b[1;34m(self, s, idx)\u001b[0m\n\u001b[0;32m 354\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m \u001b[38;5;167;01mStopIteration\u001b[39;00m \u001b[38;5;28;01mas\u001b[39;00m err:\n\u001b[1;32m--> 355\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m JSONDecodeError(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mExpecting value\u001b[39m\u001b[38;5;124m\"\u001b[39m, s, err\u001b[38;5;241m.\u001b[39mvalue) \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m\n\u001b[0;32m 356\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m obj, end\n", + "\u001b[1;31mJSONDecodeError\u001b[0m: Expecting value: line 1 column 1 (char 0)", + "\nDuring handling of the above exception, another exception occurred:\n", + "\u001b[1;31mJSONDecodeError\u001b[0m Traceback (most recent call last)", + "Cell \u001b[1;32mIn[17], line 22\u001b[0m\n\u001b[0;32m 19\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m request\u001b[38;5;241m.\u001b[39mstatus_code \u001b[38;5;241m==\u001b[39m \u001b[38;5;241m404\u001b[39m:\n\u001b[0;32m 20\u001b[0m \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124mf\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;132;01m{\u001b[39;00msample_id\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m model not found\u001b[39m\u001b[38;5;124m\"\u001b[39m)\n\u001b[1;32m---> 22\u001b[0m item \u001b[38;5;241m=\u001b[39m request\u001b[38;5;241m.\u001b[39mjson()\n\u001b[0;32m 23\u001b[0m \u001b[38;5;28mprint\u001b[39m(item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mmessage\u001b[39m\u001b[38;5;124m'\u001b[39m])\n\u001b[0;32m 25\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mmessage\u001b[39m\u001b[38;5;124m'\u001b[39m] \u001b[38;5;241m==\u001b[39m \u001b[38;5;124m'\u001b[39m\u001b[38;5;124mValid Model.\u001b[39m\u001b[38;5;124m'\u001b[39m:\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\requests\\models.py:975\u001b[0m, in \u001b[0;36mResponse.json\u001b[1;34m(self, **kwargs)\u001b[0m\n\u001b[0;32m 971\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m complexjson\u001b[38;5;241m.\u001b[39mloads(\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mtext, \u001b[38;5;241m*\u001b[39m\u001b[38;5;241m*\u001b[39mkwargs)\n\u001b[0;32m 972\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m JSONDecodeError \u001b[38;5;28;01mas\u001b[39;00m e:\n\u001b[0;32m 973\u001b[0m \u001b[38;5;66;03m# Catch JSON-related errors and raise as requests.JSONDecodeError\u001b[39;00m\n\u001b[0;32m 974\u001b[0m \u001b[38;5;66;03m# This aliases json.JSONDecodeError and simplejson.JSONDecodeError\u001b[39;00m\n\u001b[1;32m--> 975\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m RequestsJSONDecodeError(e\u001b[38;5;241m.\u001b[39mmsg, e\u001b[38;5;241m.\u001b[39mdoc, e\u001b[38;5;241m.\u001b[39mpos)\n", + "\u001b[1;31mJSONDecodeError\u001b[0m: Expecting value: line 1 column 1 (char 0)" + ] + } + ], "source": [ "subj_procedures = {}\n", "\n", - "download_files = False\n", + "download_files = True\n", "\n", "\n", "if download_files:\n", " for row_idx, row in base.iterrows(): \n", "\n", - " sample_id = str(row['Sample']['Unnamed: 4_level_1']['Unnamed: 4_level_2'])\n", + " sample_id = str(row['Sample'])\n", " print(sample_id)\n", " \n", " if len(sample_id) != 6:\n", @@ -193,267 +1138,28 @@ "metadata": {}, "outputs": [ { - "name": "stdout", - "output_type": "stream", - "text": [ - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2021-10-01 00:00:00'), 'end_date': Timestamp('2021-10-11 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2021-10-25 00:00:00'), 'end_date': Timestamp('2021-11-03 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2021-11-10 00:00:00'), 'end_date': Timestamp('2021-11-11 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2021-11-12 00:00:00'), 'end_date': Timestamp('2022-11-16 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2021, 11, 16, 0, 0), 'end_date': datetime.datetime(2021, 11, 18, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-11-18 00:00:00'), 'end_date': Timestamp('2021-11-22 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2021-11-23 00:00:00'), 'end_date': Timestamp('2021-11-25 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2021-11-25 00:00:00'), 'end_date': Timestamp('2021-12-01 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2021-12-01 00:00:00'), 'end_date': Timestamp('2021-12-03 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='576404', start_date=datetime.date(2021, 10, 1), end_date=datetime.date(2021, 10, 11), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='576404', start_date=datetime.date(2021, 10, 25), end_date=datetime.date(2021, 11, 3), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='576404', start_date=datetime.date(2021, 11, 10), end_date=datetime.date(2021, 11, 11), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='576404', start_date=datetime.date(2021, 11, 12), end_date=datetime.date(2022, 11, 16), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='576404', start_date=datetime.date(2021, 11, 16), end_date=datetime.date(2021, 11, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='576404', start_date=datetime.date(2022, 11, 18), end_date=datetime.date(2021, 11, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='576404', start_date=datetime.date(2021, 11, 23), end_date=datetime.date(2021, 11, 25), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='576404', start_date=datetime.date(2021, 11, 25), end_date=datetime.date(2021, 12, 1), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='576404', start_date=datetime.date(2021, 12, 1), end_date=datetime.date(2021, 12, 3), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-01-21 00:00:00'), 'end_date': Timestamp('2022-02-02 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-02-03 00:00:00'), 'end_date': Timestamp('2022-02-15 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-05-06 00:00:00'), 'end_date': Timestamp('2022-05-10 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 5, 10, 0, 0), 'end_date': datetime.datetime(2022, 5, 11, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-05-12 00:00:00'), 'end_date': Timestamp('2022-05-16 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-05-17 00:00:00'), 'end_date': Timestamp('2022-05-22 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-05-22 00:00:00'), 'end_date': Timestamp('2022-05-30 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-05-30 00:00:00'), 'end_date': Timestamp('2022-06-02 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='609105', start_date=datetime.date(2022, 1, 21), end_date=datetime.date(2022, 2, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='609105', start_date=datetime.date(2022, 2, 3), end_date=datetime.date(2022, 2, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='609105', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='609105', start_date=datetime.date(2022, 5, 6), end_date=datetime.date(2022, 5, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='609105', start_date=datetime.date(2022, 5, 10), end_date=datetime.date(2022, 5, 11), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='609105', start_date=datetime.date(2022, 5, 12), end_date=datetime.date(2022, 5, 16), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='609105', start_date=datetime.date(2022, 5, 17), end_date=datetime.date(2022, 5, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='609105', start_date=datetime.date(2022, 5, 22), end_date=datetime.date(2022, 5, 30), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='609105', start_date=datetime.date(2022, 5, 30), end_date=datetime.date(2022, 6, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='609107', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='609107', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='609107', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='609107', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='609107', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='609107', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='609107', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='609107', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='609107', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='609281', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='609281', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='609281', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='609281', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='609281', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='609281', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='609281', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='609281', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='609281', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='614978', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='614978', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='614978', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='614978', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='614978', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='614978', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='614978', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='614978', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='614978', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='614980', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='614980', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='614980', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='614980', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='614980', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='614980', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='614980', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='614980', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='614980', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-04-12 00:00:00'), 'end_date': Timestamp('2022-04-29 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-05-05 00:00:00'), 'end_date': Timestamp('2022-05-14 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-07-21 00:00:00'), 'end_date': Timestamp('2022-07-22 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-07-22 00:00:00'), 'end_date': Timestamp('2022-07-26 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 7, 26, 0, 0), 'end_date': datetime.datetime(2022, 7, 28, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-07-28 00:00:00'), 'end_date': Timestamp('2022-07-31 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-08-01 00:00:00'), 'end_date': Timestamp('2022-08-08 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-08-08 00:00:00'), 'end_date': Timestamp('2022-08-15 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-08-16 00:00:00'), 'end_date': Timestamp('2022-08-18 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='615296', start_date=datetime.date(2022, 4, 12), end_date=datetime.date(2022, 4, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='615296', start_date=datetime.date(2022, 5, 5), end_date=datetime.date(2022, 5, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='615296', start_date=datetime.date(2022, 7, 21), end_date=datetime.date(2022, 7, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='615296', start_date=datetime.date(2022, 7, 22), end_date=datetime.date(2022, 7, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='615296', start_date=datetime.date(2022, 7, 26), end_date=datetime.date(2022, 7, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='615296', start_date=datetime.date(2022, 7, 28), end_date=datetime.date(2022, 7, 31), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='615296', start_date=datetime.date(2022, 8, 1), end_date=datetime.date(2022, 8, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='615296', start_date=datetime.date(2022, 8, 8), end_date=datetime.date(2022, 8, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='615296', start_date=datetime.date(2022, 8, 16), end_date=datetime.date(2022, 8, 18), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2021-12-26 00:00:00'), 'end_date': Timestamp('2022-01-05 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-01-05 00:00:00'), 'end_date': Timestamp('2022-01-14 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-06-16 00:00:00'), 'end_date': Timestamp('2022-06-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-06-17 00:00:00'), 'end_date': Timestamp('2022-06-21 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 6, 21, 0, 0), 'end_date': datetime.datetime(2022, 6, 23, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-06-24 00:00:00'), 'end_date': Timestamp('2022-06-28 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-07-01 00:00:00'), 'end_date': Timestamp('2022-07-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-07-06 00:00:00'), 'end_date': Timestamp('2022-07-13 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-07-13 00:00:00'), 'end_date': Timestamp('2022-07-15 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='603033', start_date=datetime.date(2021, 12, 26), end_date=datetime.date(2022, 1, 5), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='603033', start_date=datetime.date(2022, 1, 5), end_date=datetime.date(2022, 1, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='603033', start_date=datetime.date(2022, 6, 16), end_date=datetime.date(2022, 6, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='603033', start_date=datetime.date(2022, 6, 17), end_date=datetime.date(2022, 6, 21), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='603033', start_date=datetime.date(2022, 6, 21), end_date=datetime.date(2022, 6, 23), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='603033', start_date=datetime.date(2022, 6, 24), end_date=datetime.date(2022, 6, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='603033', start_date=datetime.date(2022, 7, 1), end_date=datetime.date(2022, 7, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='603033', start_date=datetime.date(2022, 7, 6), end_date=datetime.date(2022, 7, 13), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='603033', start_date=datetime.date(2022, 7, 13), end_date=datetime.date(2022, 7, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-06-10 00:00:00'), 'end_date': Timestamp('2022-06-23 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-06-27 00:00:00'), 'end_date': Timestamp('2022-07-14 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': Timestamp('2023-09-24 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-09-24 00:00:00'), 'end_date': Timestamp('2023-09-29 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 9, 29, 0, 0), 'end_date': datetime.datetime(2022, 10, 1, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-10-02 00:00:00'), 'end_date': Timestamp('2022-10-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-10-07 00:00:00'), 'end_date': Timestamp('2022-10-12 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-10-12 00:00:00'), 'end_date': Timestamp('2022-10-24 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-10-24 00:00:00'), 'end_date': Timestamp('2022-10-26 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='618584', start_date=datetime.date(2022, 6, 10), end_date=datetime.date(2022, 6, 23), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='618584', start_date=datetime.date(2022, 6, 27), end_date=datetime.date(2022, 7, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='618584', start_date=datetime.date(2023, 9, 24), end_date=datetime.date(2023, 9, 29), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='618584', start_date=datetime.date(2022, 9, 29), end_date=datetime.date(2022, 10, 1), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='618584', start_date=datetime.date(2022, 10, 2), end_date=datetime.date(2022, 10, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='618584', start_date=datetime.date(2022, 10, 7), end_date=datetime.date(2022, 10, 12), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='618584', start_date=datetime.date(2022, 10, 12), end_date=datetime.date(2022, 10, 24), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='618584', start_date=datetime.date(2022, 10, 24), end_date=datetime.date(2022, 10, 26), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': 'Unknown', 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': nan, 'end_date': nan, 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "[]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-06-21 00:00:00'), 'end_date': Timestamp('2022-06-30 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-07-06 00:00:00'), 'end_date': Timestamp('2022-07-12 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-11-08 00:00:00'), 'end_date': Timestamp('2022-11-09 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-11-10 00:00:00'), 'end_date': Timestamp('2022-11-13 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 11, 14, 0, 0), 'end_date': datetime.datetime(2022, 11, 15, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-11-16 00:00:00'), 'end_date': Timestamp('2022-11-20 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-11-21 00:00:00'), 'end_date': Timestamp('2022-11-26 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-11-26 00:00:00'), 'end_date': Timestamp('2022-12-05 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-12-05 00:00:00'), 'end_date': Timestamp('2022-12-07 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='620631', start_date=datetime.date(2022, 6, 21), end_date=datetime.date(2022, 6, 30), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='620631', start_date=datetime.date(2022, 7, 6), end_date=datetime.date(2022, 7, 12), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='620631', start_date=datetime.date(2022, 11, 8), end_date=datetime.date(2022, 11, 9), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='620631', start_date=datetime.date(2022, 11, 10), end_date=datetime.date(2022, 11, 13), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='620631', start_date=datetime.date(2022, 11, 14), end_date=datetime.date(2022, 11, 15), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='620631', start_date=datetime.date(2022, 11, 16), end_date=datetime.date(2022, 11, 20), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='620631', start_date=datetime.date(2022, 11, 21), end_date=datetime.date(2022, 11, 26), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='620631', start_date=datetime.date(2022, 11, 26), end_date=datetime.date(2022, 12, 5), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='620631', start_date=datetime.date(2022, 12, 5), end_date=datetime.date(2022, 12, 7), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-06-21 00:00:00'), 'end_date': Timestamp('2022-06-30 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-07-06 00:00:00'), 'end_date': Timestamp('2022-07-12 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2022-11-08 00:00:00'), 'end_date': Timestamp('2022-11-09 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2022-11-10 00:00:00'), 'end_date': Timestamp('2022-11-13 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2022, 11, 14, 0, 0), 'end_date': datetime.datetime(2022, 11, 15, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2022-11-16 00:00:00'), 'end_date': Timestamp('2022-11-20 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2022-11-21 00:00:00'), 'end_date': Timestamp('2022-11-26 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2022-11-26 00:00:00'), 'end_date': Timestamp('2022-11-29 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2022-11-29 00:00:00'), 'end_date': Timestamp('2021-12-01 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='620629', start_date=datetime.date(2022, 6, 21), end_date=datetime.date(2022, 6, 30), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='620629', start_date=datetime.date(2022, 7, 6), end_date=datetime.date(2022, 7, 12), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='620629', start_date=datetime.date(2022, 11, 8), end_date=datetime.date(2022, 11, 9), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='620629', start_date=datetime.date(2022, 11, 10), end_date=datetime.date(2022, 11, 13), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='620629', start_date=datetime.date(2022, 11, 14), end_date=datetime.date(2022, 11, 15), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='620629', start_date=datetime.date(2022, 11, 16), end_date=datetime.date(2022, 11, 20), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='620629', start_date=datetime.date(2022, 11, 21), end_date=datetime.date(2022, 11, 26), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='620629', start_date=datetime.date(2022, 11, 26), end_date=datetime.date(2022, 11, 29), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='620629', start_date=datetime.date(2022, 11, 29), end_date=datetime.date(2021, 12, 1), experimenter_full_name='JB', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-02-01 00:00:00'), 'end_date': Timestamp('2023-02-02 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-02-02 00:00:00'), 'end_date': Timestamp('2023-02-08 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 2, 8, 0, 0), 'end_date': datetime.datetime(2023, 2, 10, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-02-10 00:00:00'), 'end_date': Timestamp('2023-02-14 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-02-14 00:00:00'), 'end_date': Timestamp('2023-02-20 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-02-20 00:00:00'), 'end_date': Timestamp('2023-02-25 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-02-25 00:00:00'), 'end_date': Timestamp('2023-02-27 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648860', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648860', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648860', start_date=datetime.date(2023, 2, 1), end_date=datetime.date(2023, 2, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648860', start_date=datetime.date(2023, 2, 2), end_date=datetime.date(2023, 2, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648860', start_date=datetime.date(2023, 2, 8), end_date=datetime.date(2023, 2, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648860', start_date=datetime.date(2023, 2, 10), end_date=datetime.date(2023, 2, 14), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648860', start_date=datetime.date(2023, 2, 14), end_date=datetime.date(2023, 2, 20), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648860', start_date=datetime.date(2023, 2, 20), end_date=datetime.date(2023, 2, 25), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648860', start_date=datetime.date(2023, 2, 25), end_date=datetime.date(2023, 2, 27), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648861', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648861', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648858', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648858', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648862', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648862', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-02-09 00:00:00'), 'end_date': Timestamp('2023-02-10 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-02-10 00:00:00'), 'end_date': Timestamp('2023-02-15 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 2, 15, 0, 0), 'end_date': datetime.datetime(2023, 2, 19, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-02-19 00:00:00'), 'end_date': Timestamp('2023-02-23 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-02-23 00:00:00'), 'end_date': Timestamp('2023-02-28 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-02-28 00:00:00'), 'end_date': Timestamp('2023-03-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-03-06 00:00:00'), 'end_date': Timestamp('2023-03-08 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648077', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648077', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648077', start_date=datetime.date(2023, 2, 9), end_date=datetime.date(2023, 2, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648077', start_date=datetime.date(2023, 2, 10), end_date=datetime.date(2023, 2, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648077', start_date=datetime.date(2023, 2, 15), end_date=datetime.date(2023, 2, 19), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648077', start_date=datetime.date(2023, 2, 19), end_date=datetime.date(2023, 2, 23), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648077', start_date=datetime.date(2023, 2, 23), end_date=datetime.date(2023, 2, 28), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648077', start_date=datetime.date(2023, 2, 28), end_date=datetime.date(2023, 3, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648077', start_date=datetime.date(2023, 3, 6), end_date=datetime.date(2023, 3, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-01-06 00:00:00'), 'end_date': Timestamp('2023-01-09 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-01-09 00:00:00'), 'end_date': Timestamp('2023-01-13 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 1, 13, 0, 0), 'end_date': datetime.datetime(2023, 1, 15, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-01-15 00:00:00'), 'end_date': Timestamp('2023-01-20 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-01-20 00:00:00'), 'end_date': Timestamp('2023-01-24 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-01-24 00:00:00'), 'end_date': Timestamp('2023-02-02 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-02-02 00:00:00'), 'end_date': Timestamp('2023-02-06 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648079', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648079', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648079', start_date=datetime.date(2023, 1, 6), end_date=datetime.date(2023, 1, 9), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648079', start_date=datetime.date(2023, 1, 9), end_date=datetime.date(2023, 1, 13), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648079', start_date=datetime.date(2023, 1, 13), end_date=datetime.date(2023, 1, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648079', start_date=datetime.date(2023, 1, 15), end_date=datetime.date(2023, 1, 20), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648079', start_date=datetime.date(2023, 1, 20), end_date=datetime.date(2023, 1, 24), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648079', start_date=datetime.date(2023, 1, 24), end_date=datetime.date(2023, 2, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648079', start_date=datetime.date(2023, 2, 2), end_date=datetime.date(2023, 2, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-01-06 00:00:00'), 'end_date': Timestamp('2023-01-09 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-01-09 00:00:00'), 'end_date': Timestamp('2023-01-13 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 1, 13, 0, 0), 'end_date': datetime.datetime(2023, 1, 15, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-01-15 00:00:00'), 'end_date': Timestamp('2023-01-20 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-01-20 00:00:00'), 'end_date': Timestamp('2023-01-24 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-01-24 00:00:00'), 'end_date': Timestamp('2023-02-02 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-02-02 00:00:00'), 'end_date': Timestamp('2023-02-06 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648698', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648698', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648698', start_date=datetime.date(2023, 1, 6), end_date=datetime.date(2023, 1, 9), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648698', start_date=datetime.date(2023, 1, 9), end_date=datetime.date(2023, 1, 13), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648698', start_date=datetime.date(2023, 1, 13), end_date=datetime.date(2023, 1, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648698', start_date=datetime.date(2023, 1, 15), end_date=datetime.date(2023, 1, 20), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648698', start_date=datetime.date(2023, 1, 20), end_date=datetime.date(2023, 1, 24), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648698', start_date=datetime.date(2023, 1, 24), end_date=datetime.date(2023, 2, 2), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648698', start_date=datetime.date(2023, 2, 2), end_date=datetime.date(2023, 2, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648699', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648699', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648700', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648700', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-04-28 00:00:00'), 'end_date': Timestamp('2023-05-04 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-05-04 00:00:00'), 'end_date': Timestamp('2023-05-08 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 5, 8, 0, 0), 'end_date': datetime.datetime(2023, 5, 10, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-05-11 00:00:00'), 'end_date': Timestamp('2023-05-15 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-05-17 00:00:00'), 'end_date': Timestamp('2023-05-22 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-05-22 00:00:00'), 'end_date': Timestamp('2023-06-01 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-06-01 00:00:00'), 'end_date': Timestamp('2023-06-03 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648696', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648696', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648696', start_date=datetime.date(2023, 4, 28), end_date=datetime.date(2023, 5, 4), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648696', start_date=datetime.date(2023, 5, 4), end_date=datetime.date(2023, 5, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648696', start_date=datetime.date(2023, 5, 8), end_date=datetime.date(2023, 5, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648696', start_date=datetime.date(2023, 5, 11), end_date=datetime.date(2023, 5, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648696', start_date=datetime.date(2023, 5, 17), end_date=datetime.date(2023, 5, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648696', start_date=datetime.date(2023, 5, 22), end_date=datetime.date(2023, 6, 1), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648696', start_date=datetime.date(2023, 6, 1), end_date=datetime.date(2023, 6, 3), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': NaT, 'end_date': NaT, 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648695', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648695', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-07 00:00:00'), 'end_date': Timestamp('2022-11-17 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2022-11-22 00:00:00'), 'end_date': Timestamp('2023-12-06 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-04-28 00:00:00'), 'end_date': Timestamp('2023-05-04 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-05-04 00:00:00'), 'end_date': Timestamp('2023-05-08 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': datetime.datetime(2023, 5, 8, 0, 0), 'end_date': datetime.datetime(2023, 5, 10, 0, 0), 'procedure_type': }\n", - "{'procedure_name': 'Stock X + VA-044 Equilibration', 'start_date': Timestamp('2023-05-11 00:00:00'), 'end_date': Timestamp('2023-05-15 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'Gelation + ProK RT', 'start_date': Timestamp('2023-05-17 00:00:00'), 'end_date': Timestamp('2023-05-22 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': \"Gelation + Add'l ProK 37C\", 'start_date': Timestamp('2023-05-22 00:00:00'), 'end_date': Timestamp('2023-06-01 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash 2', 'start_date': Timestamp('2023-06-01 00:00:00'), 'end_date': Timestamp('2023-06-03 00:00:00'), 'procedure_type': }\n", - "[SpecimenProcedure(procedure_type='Delipidation', procedure_name='DCM Delipidation (8-10d)', specimen_id='648697', start_date=datetime.date(2022, 11, 7), end_date=datetime.date(2022, 11, 17), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Delipidation', procedure_name='SBiP Delipidation (7-9d)', specimen_id='648697', start_date=datetime.date(2022, 11, 22), end_date=datetime.date(2023, 12, 6), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='MBS Gelation', specimen_id='648697', start_date=datetime.date(2023, 4, 28), end_date=datetime.date(2023, 5, 4), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='AcX Gelation', specimen_id='648697', start_date=datetime.date(2023, 5, 4), end_date=datetime.date(2023, 5, 8), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash', specimen_id='648697', start_date=datetime.date(2023, 5, 8), end_date=datetime.date(2023, 5, 10), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Stock X + VA-044 Equilibration', specimen_id='648697', start_date=datetime.date(2023, 5, 11), end_date=datetime.date(2023, 5, 15), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='Gelation + ProK RT', specimen_id='648697', start_date=datetime.date(2023, 5, 17), end_date=datetime.date(2023, 5, 22), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name=\"Gelation + Add'l ProK 37C\", specimen_id='648697', start_date=datetime.date(2023, 5, 22), end_date=datetime.date(2023, 6, 1), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None), SpecimenProcedure(procedure_type='Gelation', procedure_name='PBS Wash 2', specimen_id='648697', start_date=datetime.date(2023, 6, 1), end_date=datetime.date(2023, 6, 3), experimenter_full_name='NDO', protocol_id='unknown', reagents=[], hcr_series=None, immunolabeling=None, notes=None)]\n", - "{'procedure_name': 'DCM Delipidation (8-10d)', 'start_date': Timestamp('2022-11-21 00:00:00'), 'end_date': Timestamp('2022-12-05 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'SBiP Delipidation (7-9d)', 'start_date': Timestamp('2023-12-06 00:00:00'), 'end_date': Timestamp('2022-12-18 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'MBS Gelation', 'start_date': Timestamp('2023-01-23 00:00:00'), 'end_date': Timestamp('2023-01-24 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'AcX Gelation', 'start_date': Timestamp('2023-01-24 00:00:00'), 'end_date': Timestamp('2023-01-28 00:00:00'), 'procedure_type': }\n", - "{'procedure_name': 'PBS Wash', 'start_date': '1/28/.2023', 'end_date': datetime.datetime(2023, 1, 31, 0, 0), 'procedure_type': }\n" - ] - }, - { - "ename": "ValidationError", - "evalue": "1 validation error for SpecimenProcedure\nstart_date\n Input should be a valid date or datetime, invalid character in year [type=date_from_datetime_parsing, input_value='1/28/.2023', input_type=str]\n For further information visit https://errors.pydantic.dev/2.6/v/date_from_datetime_parsing", + "ename": "KeyError", + "evalue": "'Processed By:'", "output_type": "error", "traceback": [ "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", - "\u001b[1;31mValidationError\u001b[0m Traceback (most recent call last)", - "Cell \u001b[1;32mIn[5], line 92\u001b[0m\n\u001b[0;32m 90\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m pd\u001b[38;5;241m.\u001b[39misna(item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mstart_date\u001b[39m\u001b[38;5;124m'\u001b[39m]) \u001b[38;5;129;01mor\u001b[39;00m pd\u001b[38;5;241m.\u001b[39misna(item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mend_date\u001b[39m\u001b[38;5;124m'\u001b[39m]):\n\u001b[0;32m 91\u001b[0m \u001b[38;5;28;01mcontinue\u001b[39;00m\n\u001b[1;32m---> 92\u001b[0m specimen_procedures\u001b[38;5;241m.\u001b[39mappend(spec_maker\u001b[38;5;241m.\u001b[39mmake_spec_procedure(item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mstart_date\u001b[39m\u001b[38;5;124m'\u001b[39m], item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mend_date\u001b[39m\u001b[38;5;124m'\u001b[39m], item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mprocedure_type\u001b[39m\u001b[38;5;124m'\u001b[39m], item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mprocedure_name\u001b[39m\u001b[38;5;124m'\u001b[39m]))\n\u001b[0;32m 94\u001b[0m \u001b[38;5;28mprint\u001b[39m(specimen_procedures)\n", - "Cell \u001b[1;32mIn[4], line 8\u001b[0m, in \u001b[0;36mSpecMaker.make_spec_procedure\u001b[1;34m(self, start, end, procedure_type, procedure_name, notes, protocol_id, reagent, immunolabeling, hcr_series)\u001b[0m\n\u001b[0;32m 7\u001b[0m \u001b[38;5;28;01mdef\u001b[39;00m \u001b[38;5;21mmake_spec_procedure\u001b[39m(\u001b[38;5;28mself\u001b[39m, start, end, procedure_type, procedure_name, notes\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mNone\u001b[39;00m, protocol_id\u001b[38;5;241m=\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124munknown\u001b[39m\u001b[38;5;124m\"\u001b[39m, reagent\u001b[38;5;241m=\u001b[39m[], immunolabeling:Immunolabeling\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mNone\u001b[39;00m, hcr_series:HCRSeries\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mNone\u001b[39;00m):\n\u001b[1;32m----> 8\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m SpecimenProcedure(\n\u001b[0;32m 9\u001b[0m procedure_type\u001b[38;5;241m=\u001b[39mprocedure_type,\n\u001b[0;32m 10\u001b[0m procedure_name\u001b[38;5;241m=\u001b[39mprocedure_name,\n\u001b[0;32m 11\u001b[0m specimen_id\u001b[38;5;241m=\u001b[39m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39msample_id,\n\u001b[0;32m 12\u001b[0m start_date\u001b[38;5;241m=\u001b[39mstart,\n\u001b[0;32m 13\u001b[0m end_date\u001b[38;5;241m=\u001b[39mend,\n\u001b[0;32m 14\u001b[0m experimenter_full_name\u001b[38;5;241m=\u001b[39m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mexperimenter,\n\u001b[0;32m 15\u001b[0m protocol_id\u001b[38;5;241m=\u001b[39mprotocol_id,\n\u001b[0;32m 16\u001b[0m reagents\u001b[38;5;241m=\u001b[39mreagent,\n\u001b[0;32m 17\u001b[0m hcr_series\u001b[38;5;241m=\u001b[39mhcr_series,\n\u001b[0;32m 18\u001b[0m immunolabeling\u001b[38;5;241m=\u001b[39mimmunolabeling,\n\u001b[0;32m 19\u001b[0m notes\u001b[38;5;241m=\u001b[39mnotes,\n\u001b[0;32m 20\u001b[0m )\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pydantic\\main.py:171\u001b[0m, in \u001b[0;36mBaseModel.__init__\u001b[1;34m(self, **data)\u001b[0m\n\u001b[0;32m 169\u001b[0m \u001b[38;5;66;03m# `__tracebackhide__` tells pytest and some other tools to omit this function from tracebacks\u001b[39;00m\n\u001b[0;32m 170\u001b[0m __tracebackhide__ \u001b[38;5;241m=\u001b[39m \u001b[38;5;28;01mTrue\u001b[39;00m\n\u001b[1;32m--> 171\u001b[0m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m__pydantic_validator__\u001b[38;5;241m.\u001b[39mvalidate_python(data, self_instance\u001b[38;5;241m=\u001b[39m\u001b[38;5;28mself\u001b[39m)\n", - "\u001b[1;31mValidationError\u001b[0m: 1 validation error for SpecimenProcedure\nstart_date\n Input should be a valid date or datetime, invalid character in year [type=date_from_datetime_parsing, input_value='1/28/.2023', input_type=str]\n For further information visit https://errors.pydantic.dev/2.6/v/date_from_datetime_parsing" + "\u001b[1;31mKeyError\u001b[0m Traceback (most recent call last)", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\base.py:3652\u001b[0m, in \u001b[0;36mIndex.get_loc\u001b[1;34m(self, key)\u001b[0m\n\u001b[0;32m 3651\u001b[0m \u001b[38;5;28;01mtry\u001b[39;00m:\n\u001b[1;32m-> 3652\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_engine\u001b[38;5;241m.\u001b[39mget_loc(casted_key)\n\u001b[0;32m 3653\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m \u001b[38;5;167;01mKeyError\u001b[39;00m \u001b[38;5;28;01mas\u001b[39;00m err:\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\_libs\\index.pyx:147\u001b[0m, in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[1;34m()\u001b[0m\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\_libs\\index.pyx:176\u001b[0m, in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[1;34m()\u001b[0m\n", + "File \u001b[1;32mpandas\\_libs\\hashtable_class_helper.pxi:7080\u001b[0m, in \u001b[0;36mpandas._libs.hashtable.PyObjectHashTable.get_item\u001b[1;34m()\u001b[0m\n", + "File \u001b[1;32mpandas\\_libs\\hashtable_class_helper.pxi:7088\u001b[0m, in \u001b[0;36mpandas._libs.hashtable.PyObjectHashTable.get_item\u001b[1;34m()\u001b[0m\n", + "\u001b[1;31mKeyError\u001b[0m: 'Processed By:'", + "\nThe above exception was the direct cause of the following exception:\n", + "\u001b[1;31mKeyError\u001b[0m Traceback (most recent call last)", + "Cell \u001b[1;32mIn[5], line 15\u001b[0m\n\u001b[0;32m 11\u001b[0m items \u001b[38;5;241m=\u001b[39m []\n\u001b[0;32m 14\u001b[0m \u001b[38;5;66;03m# general info\u001b[39;00m\n\u001b[1;32m---> 15\u001b[0m processor \u001b[38;5;241m=\u001b[39m row[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mProcessed By:\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 3_level_1\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 3_level_2\u001b[39m\u001b[38;5;124m'\u001b[39m]\n\u001b[0;32m 16\u001b[0m sample_id \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mstr\u001b[39m(row[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mSample\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 4_level_1\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 4_level_2\u001b[39m\u001b[38;5;124m'\u001b[39m])\n\u001b[0;32m 17\u001b[0m genotype \u001b[38;5;241m=\u001b[39m row[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mGenotype\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 5_level_1\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 5_level_2\u001b[39m\u001b[38;5;124m'\u001b[39m]\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\series.py:1007\u001b[0m, in \u001b[0;36mSeries.__getitem__\u001b[1;34m(self, key)\u001b[0m\n\u001b[0;32m 1004\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_values[key]\n\u001b[0;32m 1006\u001b[0m \u001b[38;5;28;01melif\u001b[39;00m key_is_scalar:\n\u001b[1;32m-> 1007\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_get_value(key)\n\u001b[0;32m 1009\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m is_hashable(key):\n\u001b[0;32m 1010\u001b[0m \u001b[38;5;66;03m# Otherwise index.get_value will raise InvalidIndexError\u001b[39;00m\n\u001b[0;32m 1011\u001b[0m \u001b[38;5;28;01mtry\u001b[39;00m:\n\u001b[0;32m 1012\u001b[0m \u001b[38;5;66;03m# For labels that don't resolve as scalars like tuples and frozensets\u001b[39;00m\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\series.py:1116\u001b[0m, in \u001b[0;36mSeries._get_value\u001b[1;34m(self, label, takeable)\u001b[0m\n\u001b[0;32m 1113\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_values[label]\n\u001b[0;32m 1115\u001b[0m \u001b[38;5;66;03m# Similar to Index.get_value, but we do not fall back to positional\u001b[39;00m\n\u001b[1;32m-> 1116\u001b[0m loc \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mindex\u001b[38;5;241m.\u001b[39mget_loc(label)\n\u001b[0;32m 1118\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m is_integer(loc):\n\u001b[0;32m 1119\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_values[loc]\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\multi.py:2812\u001b[0m, in \u001b[0;36mMultiIndex.get_loc\u001b[1;34m(self, key)\u001b[0m\n\u001b[0;32m 2809\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m mask\n\u001b[0;32m 2811\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;129;01mnot\u001b[39;00m \u001b[38;5;28misinstance\u001b[39m(key, \u001b[38;5;28mtuple\u001b[39m):\n\u001b[1;32m-> 2812\u001b[0m loc \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_get_level_indexer(key, level\u001b[38;5;241m=\u001b[39m\u001b[38;5;241m0\u001b[39m)\n\u001b[0;32m 2813\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m _maybe_to_slice(loc)\n\u001b[0;32m 2815\u001b[0m keylen \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mlen\u001b[39m(key)\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\multi.py:3160\u001b[0m, in \u001b[0;36mMultiIndex._get_level_indexer\u001b[1;34m(self, key, level, indexer)\u001b[0m\n\u001b[0;32m 3157\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mslice\u001b[39m(i, j, step)\n\u001b[0;32m 3159\u001b[0m \u001b[38;5;28;01melse\u001b[39;00m:\n\u001b[1;32m-> 3160\u001b[0m idx \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_get_loc_single_level_index(level_index, key)\n\u001b[0;32m 3162\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m level \u001b[38;5;241m>\u001b[39m \u001b[38;5;241m0\u001b[39m \u001b[38;5;129;01mor\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_lexsort_depth \u001b[38;5;241m==\u001b[39m \u001b[38;5;241m0\u001b[39m:\n\u001b[0;32m 3163\u001b[0m \u001b[38;5;66;03m# Desired level is not sorted\u001b[39;00m\n\u001b[0;32m 3164\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28misinstance\u001b[39m(idx, \u001b[38;5;28mslice\u001b[39m):\n\u001b[0;32m 3165\u001b[0m \u001b[38;5;66;03m# test_get_loc_partial_timestamp_multiindex\u001b[39;00m\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\multi.py:2752\u001b[0m, in \u001b[0;36mMultiIndex._get_loc_single_level_index\u001b[1;34m(self, level_index, key)\u001b[0m\n\u001b[0;32m 2750\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;241m-\u001b[39m\u001b[38;5;241m1\u001b[39m\n\u001b[0;32m 2751\u001b[0m \u001b[38;5;28;01melse\u001b[39;00m:\n\u001b[1;32m-> 2752\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m level_index\u001b[38;5;241m.\u001b[39mget_loc(key)\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\base.py:3654\u001b[0m, in \u001b[0;36mIndex.get_loc\u001b[1;34m(self, key)\u001b[0m\n\u001b[0;32m 3652\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_engine\u001b[38;5;241m.\u001b[39mget_loc(casted_key)\n\u001b[0;32m 3653\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m \u001b[38;5;167;01mKeyError\u001b[39;00m \u001b[38;5;28;01mas\u001b[39;00m err:\n\u001b[1;32m-> 3654\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m \u001b[38;5;167;01mKeyError\u001b[39;00m(key) \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01merr\u001b[39;00m\n\u001b[0;32m 3655\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m \u001b[38;5;167;01mTypeError\u001b[39;00m:\n\u001b[0;32m 3656\u001b[0m \u001b[38;5;66;03m# If we have a listlike key, _check_indexing_error will raise\u001b[39;00m\n\u001b[0;32m 3657\u001b[0m \u001b[38;5;66;03m# InvalidIndexError. Otherwise we fall through and re-raise\u001b[39;00m\n\u001b[0;32m 3658\u001b[0m \u001b[38;5;66;03m# the TypeError.\u001b[39;00m\n\u001b[0;32m 3659\u001b[0m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_check_indexing_error(key)\n", + "\u001b[1;31mKeyError\u001b[0m: 'Processed By:'" ] } ], @@ -474,76 +1180,70 @@ "\n", " \n", " # general info\n", - " processor = row['Processed By:']['Unnamed: 3_level_1']['Unnamed: 3_level_2']\n", - " sample_id = str(row['Sample']['Unnamed: 4_level_1']['Unnamed: 4_level_2'])\n", - " genotype = row['Genotype']['Unnamed: 5_level_1']['Unnamed: 5_level_2']\n", - " label = row['Label']['Unnamed: 6_level_1']['Unnamed: 6_level_2']\n", - " inj_age = row['Age of Injection']['Unnamed: 7_level_1']['Unnamed: 7_level_2']\n", - " post_fix = row['Post-Fix']['Unnamed: 8_level_1']['Unnamed: 8_level_2']\n", + " processor = row['Processing Lead']\n", + " sample_id = str(row['Sample'])\n", + " genotype = row['Genotype']\n", + " label = row['Label']\n", + " inj_age = row['Age of Injection']\n", + " tta_virus_dose = row['tTA Virus Dose']\n", "\n", " spec_maker = SpecMaker(processor, sample_id)\n", "\n", + " \n", + " \n", + " \n", + " mbs_start = row['Gelation: MBS Start']\n", + " mbs_end = row['Gelation: MBS End']\n", + " acx_start = row['Gelation: AcX Start']\n", + " acx_end = row['Gelation: AcX End']\n", + " pbs_start = row['Gelation: PBS Wash Start']\n", + " pbs_end = row['Gelation: PBS Wash End']\n", + " stock_start = row['Gelation: Stock X + VA-044 Equilibration Start']\n", + " stock_end = row['Gelation: Stock X + VA-044 Equilibration End']\n", + " prok_rt_start = row['Gelation + ProK RT Start']\n", + " prok_rt_end = row['Gelation + ProK RT End']\n", + " prok_rt_time = row['Duration (days)']\n", + " prok_37c_start = row['Gelation + Add\\'l ProK 37C Start']\n", + " prok_37c_end = row['Gelation + Add\\'l ProK 37C End']\n", + " prok_37c_time = row['Duration (days) Gelation + Add\\'l ProK 37C 37C']\n", + " pbs2_start = row['PBS Wash Start']\n", + " pbs2_end = row['PBS Wash End']\n", + " pbs_stored = row['Date of Storage in PBS Az 0.05% @4C']\n", + " expansion_start = row['Expansion Start Date']\n", + " expansion_end = row['Expansion End Date']\n", + " notes1 = row['Notes']\n", + " notes2 = row['Notes II']\n", + " notes3 = row['Notes III']\n", + "\n", " # delipidation\n", - " dcm_delip_name = 'DCM Delipidation (8-10d)'\n", - " dcm_delip_start = row['DCM Delipidation (8-10d)']['Unnamed: 9_level_1']['Date Started']\n", - " dcm_delip_end = row['DCM Delipidation (8-10d)']['Unnamed: 10_level_1']['Date Finished']\n", + " dcm_delip_name = 'DCM Delipidation'\n", + " dcm_delip_start = row['DCM Delipidation Start']\n", + " dcm_delip_end = row['DCM Delipidation End']\n", " items.append(basic_dict(dcm_delip_name, dcm_delip_start, dcm_delip_end, SpecimenProcedureType.DELIPIDATION))\n", "\n", "\n", - " sbip_delip_name = 'SBiP Delipidation (7-9d)'\n", - " sbip_delip_start = row['SBiP Delipidation (7-9d)']['Unnamed: 11_level_1']['Date Started']\n", - " sbip_delip_end = row['SBiP Delipidation (7-9d)']['Unnamed: 12_level_1']['Date Finished']\n", + " sbip_delip_name = 'SBiP Delipidation'\n", + " sbip_delip_start = row['SBiP Delipidation Start']\n", + " sbip_delip_end = row['SBiP Delipidation End']\n", " items.append(basic_dict(sbip_delip_name, sbip_delip_start, sbip_delip_end, SpecimenProcedureType.DELIPIDATION))\n", "\n", " # immunolabeling\n", - " immunolabeling_name = 'Immunolabeling (31-33d)'\n", - " immunolabeling_primary = row['Immunolabeling (31-33d)']['Unnamed: 13_level_1']['Primary (10ug, 20ug for primary Conjugate)']\n", - " immunolabeling_secondary = row['Immunolabeling (31-33d)']['Unnamed: 14_level_1']['Secondary (20ug)']\n", + " immunolabeling_name = 'Immunolabeling'\n", + " immuno_primary_antibody = row['Immuno: Primary Antibody']\n", + " immuno_secondary_antibody = row['Immunolabeling (31-33d)']['Unnamed: 14_level_1']['Secondary (20ug)']\n", " # items.append(basic_dict(immunolabeling_name, immunolabeling_primary, immunolabeling_secondary, SpecimenProcedureType.IMMUNOLABELING))\n", - "\n", - " # gelation\n", - " mbs_gel_name = 'MBS Gelation'\n", - " mbs_gel_start = row['Gelation (25d)']['MBS ']['Date Started']\n", - " mbs_gel_end = row['Gelation (25d)']['MBS ']['Date Finished']\n", - " items.append(basic_dict(mbs_gel_name, mbs_gel_start, mbs_gel_end, SpecimenProcedureType.GELATION))\n", - "\n", - " acx_gel_name = 'AcX Gelation'\n", - " acx_gel_start = row['Gelation (25d)']['AcX']['Date Started']\n", - " acx_gel_end = row['Gelation (25d)']['AcX']['Date Finished']\n", - " items.append(basic_dict(acx_gel_name, acx_gel_start, acx_gel_end, SpecimenProcedureType.GELATION))\n", - "\n", - " pbs_gel_name = 'PBS Wash'\n", - " pbs_gel_start = row['Gelation (25d)']['PBS Wash']['Date Started']\n", - " pbs_gel_end = row['Gelation (25d)']['PBS Wash']['Date Finished']\n", - " items.append(basic_dict(pbs_gel_name, pbs_gel_start, pbs_gel_end, SpecimenProcedureType.GELATION))\n", - "\n", - " stock_gel_name = 'Stock X + VA-044 Equilibration'\n", - " stock_gel_start = row['Gelation (25d)']['Stock X + VA-044 Equilibration']['Date Started']\n", - " stock_gel_end = row['Gelation (25d)']['Stock X + VA-044 Equilibration']['Date Finished']\n", - " items.append(basic_dict(stock_gel_name, stock_gel_start, stock_gel_end, SpecimenProcedureType.GELATION))\n", - "\n", - " prok_gel_name = 'Gelation + ProK RT'\n", - " prok_gel_start = row['Gelation (25d)']['Gelation + ProK RT']['Date Started']\n", - " prok_gel_end = row['Gelation (25d)']['Gelation + ProK RT']['Date Finished']\n", - " items.append(basic_dict(prok_gel_name, prok_gel_start, prok_gel_end, SpecimenProcedureType.GELATION))\n", - " prok_rt_gel_time = row['Gelation (25d)']['Gelation + ProK RT']['TIme']\n", - "\n", - " prok_37c_gel_name = 'Gelation + Add\\'l ProK 37C'\n", - " prok_37c_gel_start = row['Gelation (25d)'][\"Gelation + Add'l ProK 37C\"]['Date Started']\n", - " prok_37c_gel_end = row['Gelation (25d)'][\"Gelation + Add'l ProK 37C\"]['Date Finished']\n", - " items.append(basic_dict(prok_37c_gel_name, prok_37c_gel_start, prok_37c_gel_end, SpecimenProcedureType.GELATION))\n", - " prok_37c_gel_time = row['Gelation (25d)'][\"Gelation + Add'l ProK 37C\"]['Time']\n", - "\n", - " pbs2_gel_name = 'PBS Wash 2'\n", - " pbs2_gel_start = row['Gelation (25d)']['PBS Wash']['Date Started.1']\n", - " pbs2_gel_end = row['Gelation (25d)']['PBS Wash']['Date Finished.1']\n", - " items.append(basic_dict(pbs2_gel_name, pbs2_gel_start, pbs2_gel_end, SpecimenProcedureType.GELATION))\n", - " pbs_stored_bool = row['Gelation (25d)']['PBS Wash']['Stored in PBS Azide 0.01% at 4C']\n", - "\n", - "\n", - " notes1 = row['Gelation (25d)']['PBS Wash']['Notes']\n", - " notes2 = row['Gelation (25d)']['PBS Wash']['Notes.1']\n", - " notes3 = row['Gelation (25d)']['PBS Wash']['Notes.2']\n", + " immuno_primary_mass = row['Mass of Primary Antibody used per Brain (ug)']\n", + " immuno_primary_catalogue = row['Primary Antibody Catalog #']\n", + " immuno_primary_lot = row['Primary Antibody Lot #']\n", + " immuno_primary_rrid = row['Primary Antibody RRID']\n", + " immuno_primary_start = row['Immuno: Primary Ab Start Date']\n", + " immuno_secondary_antibody = row['Immuno Secondary']\n", + " immuno_secondary_mass = row['Mass of Secondary Antibody used per Brain (ug)']\n", + " immuno_secondary_catalogue = row['Secondary Antibody Catalog #']\n", + " immuno_secondary_lot = row['Secondary Antibody Lot #']\n", + " immuno_secondary_rrid = row['Secondary Antibody RRID']\n", + " fluorophore = row['Fluorophore']\n", + " immuno_secondary_start = row['Immuno: Secondary Ab Start Date']\n", "\n", "\n", " specimen_procedures = []\n", From c2934d76e1b9cc1ed6e09324a4cdbfeb0f392b0e Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Tue, 12 Mar 2024 15:22:27 -0400 Subject: [PATCH 17/43] Delete 634173_invalid.json --- scripts/Exaspim_ingest/original_spec_files/634173_invalid.json | 1 - 1 file changed, 1 deletion(-) delete mode 100644 scripts/Exaspim_ingest/original_spec_files/634173_invalid.json diff --git a/scripts/Exaspim_ingest/original_spec_files/634173_invalid.json b/scripts/Exaspim_ingest/original_spec_files/634173_invalid.json deleted file mode 100644 index 1d917884..00000000 --- a/scripts/Exaspim_ingest/original_spec_files/634173_invalid.json +++ /dev/null @@ -1 +0,0 @@ -{"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", "schema_version": "0.11.5", "subject_id": "634173", "subject_procedures": [{"procedure_type": "Surgery", "start_date": "2022-07-07", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"procedure_type": "Perfusion", "output_specimen_ids": ["634173"]}], "notes": null}], "specimen_procedures": [], "notes": null} \ No newline at end of file From 700dbfa3679b8b84efb4b4cfd3a78440853214cb Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 14 Mar 2024 12:26:11 -0400 Subject: [PATCH 18/43] updates --- .../MRI_ingest/output/test_mri_session.json | 273 +++++++++++++++++- scripts/MRI_ingest/scratch.ipynb | 98 ++++++- 2 files changed, 354 insertions(+), 17 deletions(-) diff --git a/scripts/MRI_ingest/output/test_mri_session.json b/scripts/MRI_ingest/output/test_mri_session.json index 58ccef97..ae966260 100644 --- a/scripts/MRI_ingest/output/test_mri_session.json +++ b/scripts/MRI_ingest/output/test_mri_session.json @@ -2,8 +2,8 @@ "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/mri_session.py", "schema_version": "0.3.3", "subject_id": "", - "session_start_time": "2024-03-11T14:32:10.066700", - "session_end_time": "2024-03-11T14:32:10.066700", + "session_start_time": "2024-03-12T16:27:55.584892", + "session_end_time": "2024-03-12T16:27:55.584892", "experimenter_full_name": [ "Mae" ], @@ -28,13 +28,268 @@ "magnetic_strength_unit": "T" }, "scans": [ - null, - null, - null, - null, - null, - null, - null + { + "scan_index": 1, + "scan_type": "Set Up", + "primary_scan": false, + "scan_sequence_type": "Other", + "rare_factor": null, + "echo_time": "3.42", + "effective_echo_time": null, + "echo_time_unit": "millisecond", + "repetition_time": "100.0", + "repetition_time_unit": "millisecond", + "vc_orientation": null, + "vc_position": null, + "subject_position": "Supine", + "voxel_sizes": { + "type": "scale", + "scale": [ + "0.234375", + "0.234375", + "0" + ] + }, + "processing_steps": [], + "additional_scan_parameters": {}, + "notes": "Scan sequence FLASH not recognized" + }, + { + "scan_index": 2, + "scan_type": "3D Scan", + "primary_scan": false, + "scan_sequence_type": "RARE", + "rare_factor": 8, + "echo_time": "5.49333333333333", + "effective_echo_time": "5.49333333333332962666872845147736370563507080078125", + "echo_time_unit": "millisecond", + "repetition_time": "2000.0", + "repetition_time_unit": "millisecond", + "vc_orientation": null, + "vc_position": null, + "subject_position": "Supine", + "voxel_sizes": { + "type": "scale", + "scale": [ + "0.09765625", + "0.1953125", + "0" + ] + }, + "processing_steps": [], + "additional_scan_parameters": {}, + "notes": null + }, + { + "scan_index": 3, + "scan_type": "3D Scan", + "primary_scan": false, + "scan_sequence_type": "RARE", + "rare_factor": 8, + "echo_time": "5.49333333333333", + "effective_echo_time": "5.49333333333332962666872845147736370563507080078125", + "echo_time_unit": "millisecond", + "repetition_time": "2000.0", + "repetition_time_unit": "millisecond", + "vc_orientation": null, + "vc_position": null, + "subject_position": "Supine", + "voxel_sizes": { + "type": "scale", + "scale": [ + "0.09765625", + "0.1953125", + "0" + ] + }, + "processing_steps": [], + "additional_scan_parameters": {}, + "notes": null + }, + { + "scan_index": 4, + "scan_type": "3D Scan", + "primary_scan": false, + "scan_sequence_type": "RARE", + "rare_factor": 4, + "echo_time": "5.33333333333333", + "effective_echo_time": "10.6666666666666998253276688046753406524658203125", + "echo_time_unit": "millisecond", + "repetition_time": "500.0", + "repetition_time_unit": "millisecond", + "vc_orientation": { + "type": "rotation", + "rotation": [ + "1.0", + "0.0", + "0.0", + "0.0", + "0.0", + "-1.0", + "0.0", + "1.0", + "0.0" + ] + }, + "vc_position": { + "type": "translation", + "translation": [ + "-6.1", + "-7.1", + "8.4" + ] + }, + "subject_position": "Supine", + "voxel_sizes": { + "type": "scale", + "scale": [ + "0.5", + "0.4375", + "0.52" + ] + }, + "processing_steps": [], + "additional_scan_parameters": {}, + "notes": null + }, + { + "scan_index": 5, + "scan_type": "3D Scan", + "primary_scan": false, + "scan_sequence_type": "RARE", + "rare_factor": 4, + "echo_time": "5.33333333333333", + "effective_echo_time": "10.6666666666666998253276688046753406524658203125", + "echo_time_unit": "millisecond", + "repetition_time": "500.0", + "repetition_time_unit": "millisecond", + "vc_orientation": { + "type": "rotation", + "rotation": [ + "1.0", + "0.0", + "0.0", + "0.0", + "0.0", + "-1.0", + "0.0", + "1.0", + "0.0" + ] + }, + "vc_position": { + "type": "translation", + "translation": [ + "-6.1", + "-7.1", + "8.1" + ] + }, + "subject_position": "Supine", + "voxel_sizes": { + "type": "scale", + "scale": [ + "0.5", + "0.4375", + "0.52" + ] + }, + "processing_steps": [], + "additional_scan_parameters": {}, + "notes": null + }, + { + "scan_index": 6, + "scan_type": "3D Scan", + "primary_scan": false, + "scan_sequence_type": "RARE", + "rare_factor": 4, + "echo_time": "5.33333333333333", + "effective_echo_time": "10.6666666666666998253276688046753406524658203125", + "echo_time_unit": "millisecond", + "repetition_time": "500.0", + "repetition_time_unit": "millisecond", + "vc_orientation": { + "type": "rotation", + "rotation": [ + "1.0", + "0.0", + "0.0", + "0.0", + "0.0", + "-1.0", + "0.0", + "1.0", + "0.0" + ] + }, + "vc_position": { + "type": "translation", + "translation": [ + "-6.1", + "-7.1", + "7.9" + ] + }, + "subject_position": "Supine", + "voxel_sizes": { + "type": "scale", + "scale": [ + "0.5", + "0.4375", + "0.52" + ] + }, + "processing_steps": [], + "additional_scan_parameters": {}, + "notes": null + }, + { + "scan_index": 7, + "scan_type": "3D Scan", + "primary_scan": true, + "scan_sequence_type": "RARE", + "rare_factor": 4, + "echo_time": "5.33333333333333", + "effective_echo_time": "10.6666666666666998253276688046753406524658203125", + "echo_time_unit": "millisecond", + "repetition_time": "500.0", + "repetition_time_unit": "millisecond", + "vc_orientation": { + "type": "rotation", + "rotation": [ + "1.0", + "0.0", + "0.0", + "0.0", + "0.0", + "-1.0", + "0.0", + "1.0", + "0.0" + ] + }, + "vc_position": { + "type": "translation", + "translation": [ + "-6.1", + "-7.0", + "7.9" + ] + }, + "subject_position": "Supine", + "voxel_sizes": { + "type": "scale", + "scale": [ + "0.1", + "0.1", + "0.1" + ] + }, + "processing_steps": [], + "additional_scan_parameters": {}, + "notes": null + } ], "notes": "none" } \ No newline at end of file diff --git a/scripts/MRI_ingest/scratch.ipynb b/scripts/MRI_ingest/scratch.ipynb index 43b55dc7..c8cabffb 100644 --- a/scripts/MRI_ingest/scratch.ipynb +++ b/scripts/MRI_ingest/scratch.ipynb @@ -141,7 +141,7 @@ "metadata": {}, "outputs": [], "source": [ - "from aind_data_schema.core.mri_session import MRIScan, MriScanSequence, ScanType, SubjectPosition\n", + "from aind_data_schema.core.mri_session import MriScanSequence, ScanType, SubjectPosition\n", "from decimal import Decimal\n", "from aind_data_schema.models.units import MassUnit, TimeUnit\n", "\n", @@ -170,6 +170,71 @@ "execution_count": 7, "metadata": {}, "outputs": [], + "source": [ + "from pydantic import Field, ValidationInfo, field_validator, model_validator\n", + "from aind_data_schema.base import AindCoreModel, AindGenericType, AindModel\n", + "from typing import List, Literal, Optional\n", + "from aind_data_schema.models.process_names import ProcessName\n", + "\n", + "\n", + "class MRIScan(AindModel):\n", + " \"\"\"Description of a 3D scan\"\"\"\n", + "\n", + " scan_index: int = Field(..., title=\"Scan index\")\n", + " scan_type: ScanType = Field(..., title=\"Scan type\")\n", + " primary_scan: bool = Field(\n", + " ..., title=\"Primary scan\", description=\"Indicates the primary scan used for downstream analysis\"\n", + " )\n", + " scan_sequence_type: MriScanSequence = Field(..., title=\"Scan sequence\")\n", + " rare_factor: Optional[int] = Field(None, title=\"RARE factor\")\n", + " echo_time: Decimal = Field(..., title=\"Echo time (ms)\")\n", + " effective_echo_time: Optional[Decimal] = Field(None, title=\"Effective echo time (ms)\")\n", + " echo_time_unit: TimeUnit = Field(TimeUnit.MS, title=\"Echo time unit\")\n", + " repetition_time: Decimal = Field(..., title=\"Repetition time (ms)\")\n", + " repetition_time_unit: TimeUnit = Field(TimeUnit.MS, title=\"Repetition time unit\")\n", + " # fields required to get correct orientation\n", + " vc_orientation: Optional[Rotation3dTransform] = Field(None, title=\"Scan orientation\")\n", + " vc_position: Optional[Translation3dTransform] = Field(None, title=\"Scan position\")\n", + " subject_position: SubjectPosition = Field(..., title=\"Subject position\")\n", + " # other fields\n", + " voxel_sizes: Scale3dTransform = Field(..., title=\"Voxel sizes\", description=\"Resolution\")\n", + " processing_steps: List[\n", + " Literal[\n", + " ProcessName.FIDUCIAL_SEGMENTATION,\n", + " ProcessName.REGISTRATION_TO_TEMPLATE,\n", + " ProcessName.SKULL_STRIPPING,\n", + " ]\n", + " ] = Field([])\n", + " additional_scan_parameters: AindGenericType = Field(..., title=\"Parameters\")\n", + " notes: Optional[str] = Field(None, title=\"Notes\", validate_default=True)\n", + "\n", + " @field_validator(\"notes\", mode=\"after\")\n", + " def validate_other(cls, value: Optional[str], info: ValidationInfo) -> Optional[str]:\n", + " \"\"\"Validator for other/notes\"\"\"\n", + "\n", + " if info.data.get(\"scan_sequence_type\") == MriScanSequence.OTHER and not value:\n", + " raise ValueError(\n", + " \"Notes cannot be empty if scan_sequence_type is Other.\"\n", + " \" Describe the scan_sequence_type in the notes field.\"\n", + " )\n", + " return value\n", + "\n", + " @model_validator(mode=\"after\")\n", + " def validate_primary_scan(self):\n", + " \"\"\"Validate that primary scan has vc_orientation and vc_position fields\"\"\"\n", + "\n", + " if self.primary_scan:\n", + " if not self.vc_orientation or not self.vc_position:\n", + " raise ValueError(\"Primary scan must have vc_orientation and vc_position\")\n", + " \n", + " return self" + ] + }, + { + "cell_type": "code", + "execution_count": 8, + "metadata": {}, + "outputs": [], "source": [ "from bruker2nifti._metadata import BrukerMetadata\n", "from pathlib import Path\n", @@ -203,6 +268,8 @@ " primary_scan = True\n", " new_scan = self.make_model_from_scan(scan, scan_type, primary_scan)\n", " logging.info(f'loaded scan {new_scan}')\n", + "\n", + " print(\"dumped: \", new_scan.model_dump_json())\n", " scans.append(new_scan)\n", "\n", " # scanner_dict = {\n", @@ -296,10 +363,11 @@ " translation = None\n", "\n", " scale=self.cur_method['SpatResol'].tolist()\n", - " if len(scale) != 3:\n", - " scale = None\n", - " else:\n", - " scale = Scale3dTransform(scale=scale)\n", + " while len(scale) < 3:\n", + " scale.append(0)\n", + " # scale = None\n", + " \n", + " scale = Scale3dTransform(scale=scale)\n", "\n", " try:\n", " return MRIScan(\n", @@ -328,7 +396,7 @@ }, { "cell_type": "code", - "execution_count": 8, + "execution_count": 9, "metadata": {}, "outputs": [ { @@ -347,9 +415,23 @@ }, { "cell_type": "code", - "execution_count": 9, + "execution_count": 10, "metadata": {}, - "outputs": [], + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "dumped: {\"scan_index\":1,\"scan_type\":\"Set Up\",\"primary_scan\":false,\"scan_sequence_type\":\"Other\",\"rare_factor\":null,\"echo_time\":\"3.42\",\"effective_echo_time\":null,\"echo_time_unit\":\"millisecond\",\"repetition_time\":\"100.0\",\"repetition_time_unit\":\"millisecond\",\"vc_orientation\":null,\"vc_position\":null,\"subject_position\":\"Supine\",\"voxel_sizes\":{\"type\":\"scale\",\"scale\":[\"0.234375\",\"0.234375\",\"0\"]},\"processing_steps\":[],\"additional_scan_parameters\":{},\"notes\":\"Scan sequence FLASH not recognized\"}\n", + "dumped: {\"scan_index\":2,\"scan_type\":\"3D Scan\",\"primary_scan\":false,\"scan_sequence_type\":\"RARE\",\"rare_factor\":8,\"echo_time\":\"5.49333333333333\",\"effective_echo_time\":\"5.49333333333332962666872845147736370563507080078125\",\"echo_time_unit\":\"millisecond\",\"repetition_time\":\"2000.0\",\"repetition_time_unit\":\"millisecond\",\"vc_orientation\":null,\"vc_position\":null,\"subject_position\":\"Supine\",\"voxel_sizes\":{\"type\":\"scale\",\"scale\":[\"0.09765625\",\"0.1953125\",\"0\"]},\"processing_steps\":[],\"additional_scan_parameters\":{},\"notes\":null}\n", + "dumped: {\"scan_index\":3,\"scan_type\":\"3D Scan\",\"primary_scan\":false,\"scan_sequence_type\":\"RARE\",\"rare_factor\":8,\"echo_time\":\"5.49333333333333\",\"effective_echo_time\":\"5.49333333333332962666872845147736370563507080078125\",\"echo_time_unit\":\"millisecond\",\"repetition_time\":\"2000.0\",\"repetition_time_unit\":\"millisecond\",\"vc_orientation\":null,\"vc_position\":null,\"subject_position\":\"Supine\",\"voxel_sizes\":{\"type\":\"scale\",\"scale\":[\"0.09765625\",\"0.1953125\",\"0\"]},\"processing_steps\":[],\"additional_scan_parameters\":{},\"notes\":null}\n", + "dumped: {\"scan_index\":4,\"scan_type\":\"3D Scan\",\"primary_scan\":false,\"scan_sequence_type\":\"RARE\",\"rare_factor\":4,\"echo_time\":\"5.33333333333333\",\"effective_echo_time\":\"10.6666666666666998253276688046753406524658203125\",\"echo_time_unit\":\"millisecond\",\"repetition_time\":\"500.0\",\"repetition_time_unit\":\"millisecond\",\"vc_orientation\":{\"type\":\"rotation\",\"rotation\":[\"1.0\",\"0.0\",\"0.0\",\"0.0\",\"0.0\",\"-1.0\",\"0.0\",\"1.0\",\"0.0\"]},\"vc_position\":{\"type\":\"translation\",\"translation\":[\"-6.1\",\"-7.1\",\"8.4\"]},\"subject_position\":\"Supine\",\"voxel_sizes\":{\"type\":\"scale\",\"scale\":[\"0.5\",\"0.4375\",\"0.52\"]},\"processing_steps\":[],\"additional_scan_parameters\":{},\"notes\":null}\n", + "dumped: {\"scan_index\":5,\"scan_type\":\"3D Scan\",\"primary_scan\":false,\"scan_sequence_type\":\"RARE\",\"rare_factor\":4,\"echo_time\":\"5.33333333333333\",\"effective_echo_time\":\"10.6666666666666998253276688046753406524658203125\",\"echo_time_unit\":\"millisecond\",\"repetition_time\":\"500.0\",\"repetition_time_unit\":\"millisecond\",\"vc_orientation\":{\"type\":\"rotation\",\"rotation\":[\"1.0\",\"0.0\",\"0.0\",\"0.0\",\"0.0\",\"-1.0\",\"0.0\",\"1.0\",\"0.0\"]},\"vc_position\":{\"type\":\"translation\",\"translation\":[\"-6.1\",\"-7.1\",\"8.1\"]},\"subject_position\":\"Supine\",\"voxel_sizes\":{\"type\":\"scale\",\"scale\":[\"0.5\",\"0.4375\",\"0.52\"]},\"processing_steps\":[],\"additional_scan_parameters\":{},\"notes\":null}\n", + "dumped: {\"scan_index\":6,\"scan_type\":\"3D Scan\",\"primary_scan\":false,\"scan_sequence_type\":\"RARE\",\"rare_factor\":4,\"echo_time\":\"5.33333333333333\",\"effective_echo_time\":\"10.6666666666666998253276688046753406524658203125\",\"echo_time_unit\":\"millisecond\",\"repetition_time\":\"500.0\",\"repetition_time_unit\":\"millisecond\",\"vc_orientation\":{\"type\":\"rotation\",\"rotation\":[\"1.0\",\"0.0\",\"0.0\",\"0.0\",\"0.0\",\"-1.0\",\"0.0\",\"1.0\",\"0.0\"]},\"vc_position\":{\"type\":\"translation\",\"translation\":[\"-6.1\",\"-7.1\",\"7.9\"]},\"subject_position\":\"Supine\",\"voxel_sizes\":{\"type\":\"scale\",\"scale\":[\"0.5\",\"0.4375\",\"0.52\"]},\"processing_steps\":[],\"additional_scan_parameters\":{},\"notes\":null}\n", + "dumped: {\"scan_index\":7,\"scan_type\":\"3D Scan\",\"primary_scan\":true,\"scan_sequence_type\":\"RARE\",\"rare_factor\":4,\"echo_time\":\"5.33333333333333\",\"effective_echo_time\":\"10.6666666666666998253276688046753406524658203125\",\"echo_time_unit\":\"millisecond\",\"repetition_time\":\"500.0\",\"repetition_time_unit\":\"millisecond\",\"vc_orientation\":{\"type\":\"rotation\",\"rotation\":[\"1.0\",\"0.0\",\"0.0\",\"0.0\",\"0.0\",\"-1.0\",\"0.0\",\"1.0\",\"0.0\"]},\"vc_position\":{\"type\":\"translation\",\"translation\":[\"-6.1\",\"-7.0\",\"7.9\"]},\"subject_position\":\"Supine\",\"voxel_sizes\":{\"type\":\"scale\",\"scale\":[\"0.1\",\"0.1\",\"0.1\"]},\"processing_steps\":[],\"additional_scan_parameters\":{},\"notes\":null}\n" + ] + } + ], "source": [ "session = loader.load_mri_session([\"Mae\"], \"7\", \"1\", ScannerLocation.FRED_HUTCH, MagneticStrength.MRI_7T)" ] From 4180ffb3aa1ad75d7e039c2e03d80ce5b30374d7 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Wed, 20 Mar 2024 15:42:08 -0400 Subject: [PATCH 19/43] updates for changes to smartsheet --- .gitignore | 1 + scripts/Exaspim_ingest/ingest_exaspim.ipynb | 1157 ++----------------- 2 files changed, 103 insertions(+), 1055 deletions(-) diff --git a/.gitignore b/.gitignore index 11115364..9d0f5c8d 100644 --- a/.gitignore +++ b/.gitignore @@ -27,6 +27,7 @@ share/python-wheels/ *.egg MANIFEST scripts/MRI_ingest +scripts/Exaspim_ingest/original_spec_files # PyInstaller # Usually these files are written by a python script from a template diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index 8f3f21f5..936369ad 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -2,14 +2,14 @@ "cells": [ { "cell_type": "code", - "execution_count": 6, + "execution_count": 1, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\openpyxl\\styles\\stylesheet.py:226: UserWarning: Workbook contains no default style, apply openpyxl's default\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\openpyxl\\styles\\stylesheet.py:226: UserWarning: Workbook contains no default style, apply openpyxl's default\n", " warn(\"Workbook contains no default style, apply openpyxl's default\")\n" ] } @@ -23,7 +23,7 @@ "import glob\n", "from enum import Enum\n", "\n", - "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, Immunolabeling, HCRSeries\n", + "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, Immunolabeling, ImmunolabelClass, HCRSeries, Antibody\n", "\n", "\n", "base = pd.read_excel(\"./ExM Sample Tracking smartsheet.xlsx\", sheet_name=\"ExM Sample Tracking\", header=[0], converters={})\n" @@ -31,7 +31,7 @@ }, { "cell_type": "code", - "execution_count": 9, + "execution_count": 2, "metadata": {}, "outputs": [ { @@ -73,1007 +73,13 @@ }, { "cell_type": "code", - "execution_count": 17, + "execution_count": 3, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "576404\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'576404'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "609105\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609105'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "609107\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609107'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "609281\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'609281'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "614978\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'614978'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "614980\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'614980'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "615296\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'615296'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "603033\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'603033'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "618584\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'618584'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "146\n", - "620631\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'620631'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "620629\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'620629'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648860\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648860'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648861\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648861'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648858\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648858'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648862\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648862'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648077\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648077'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648079\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648079'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648698\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648698'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648699\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648699'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648700\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648700'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648696\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648696'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648695\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648695'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648697\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648697'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "651324\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651324'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "651327\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651327'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "650008\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650008'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "650009\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650009'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "650010\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650010'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "650011\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'650011'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "652779\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652779'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "652781\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652781'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648434\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648434'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648435\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648435'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "648436\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'648436'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "651305\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651305'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653432\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653432'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "nan\n", - "nan\n", - "653430\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653430'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "nan\n", - "653431\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653431'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "nan\n", - "653980\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653980'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "654727\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654727'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653981\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653981'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653159\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653159'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653158\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653158'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "658734\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658734'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "658735\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'658735'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "613814\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'613814'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "618583\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'618583'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "Z13288-QN22-26-036\n", - "659146\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'659146'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "653153\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'653153'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660629\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660629'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660630\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660630'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "657676\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'657676'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660950\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660950'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "651895\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651895'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "654306\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654306'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "661300\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'661300'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660949\n", - "There was an error retrieving records from one or more of the databases.\n", - "651897\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'651897'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "654308\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'654308'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "665470\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665470'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.1.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "664761\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'664761'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "665465\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665465'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "665082\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665082'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "665081\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'665081'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "652441\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652441'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "652445\n", - "Validation Errors: 5 validation errors for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_materials\n", - " List should have at least 1 item after validation, not 0 [type=too_short, input_value=[], input_type=list]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/too_short\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.protocol_id\n", - " Field required [type=missing, input_value={'injection_materials': [..., 'injection_eye': None}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_volume\n", - " Decimal input should be an integer, float, string or Decimal object [type=decimal_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/decimal_type\n", - "subject_procedures.0.Surgery.procedures.0.Retro-orbital injection.injection_eye\n", - " Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/string_type\n", - "subject_procedures.1.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'652445'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660625\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660625'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "660627\n", - "Validation Errors: 1 validation error for Procedures\n", - "subject_procedures.0.Surgery.procedures.0.Perfusion.protocol_id\n", - " Field required [type=missing, input_value={'procedure_type': 'Perfu...ecimen_ids': {'660627'}}, input_type=dict]\n", - " For further information visit https://errors.pydantic.dev/2.6/v/missing\n", - "516429\n" - ] - }, - { - "ename": "JSONDecodeError", - "evalue": "Expecting value: line 1 column 1 (char 0)", - "output_type": "error", - "traceback": [ - "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", - "\u001b[1;31mJSONDecodeError\u001b[0m Traceback (most recent call last)", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\requests\\models.py:971\u001b[0m, in \u001b[0;36mResponse.json\u001b[1;34m(self, **kwargs)\u001b[0m\n\u001b[0;32m 970\u001b[0m \u001b[38;5;28;01mtry\u001b[39;00m:\n\u001b[1;32m--> 971\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m complexjson\u001b[38;5;241m.\u001b[39mloads(\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mtext, \u001b[38;5;241m*\u001b[39m\u001b[38;5;241m*\u001b[39mkwargs)\n\u001b[0;32m 972\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m JSONDecodeError \u001b[38;5;28;01mas\u001b[39;00m e:\n\u001b[0;32m 973\u001b[0m \u001b[38;5;66;03m# Catch JSON-related errors and raise as requests.JSONDecodeError\u001b[39;00m\n\u001b[0;32m 974\u001b[0m \u001b[38;5;66;03m# This aliases json.JSONDecodeError and simplejson.JSONDecodeError\u001b[39;00m\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\json\\__init__.py:346\u001b[0m, in \u001b[0;36mloads\u001b[1;34m(s, cls, object_hook, parse_float, parse_int, parse_constant, object_pairs_hook, **kw)\u001b[0m\n\u001b[0;32m 343\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m (\u001b[38;5;28mcls\u001b[39m \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m object_hook \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m\n\u001b[0;32m 344\u001b[0m parse_int \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m parse_float \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m\n\u001b[0;32m 345\u001b[0m parse_constant \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m object_pairs_hook \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m \u001b[38;5;129;01mand\u001b[39;00m \u001b[38;5;129;01mnot\u001b[39;00m kw):\n\u001b[1;32m--> 346\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m _default_decoder\u001b[38;5;241m.\u001b[39mdecode(s)\n\u001b[0;32m 347\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28mcls\u001b[39m \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m:\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\json\\decoder.py:337\u001b[0m, in \u001b[0;36mJSONDecoder.decode\u001b[1;34m(self, s, _w)\u001b[0m\n\u001b[0;32m 333\u001b[0m \u001b[38;5;250m\u001b[39m\u001b[38;5;124;03m\"\"\"Return the Python representation of ``s`` (a ``str`` instance\u001b[39;00m\n\u001b[0;32m 334\u001b[0m \u001b[38;5;124;03mcontaining a JSON document).\u001b[39;00m\n\u001b[0;32m 335\u001b[0m \n\u001b[0;32m 336\u001b[0m \u001b[38;5;124;03m\"\"\"\u001b[39;00m\n\u001b[1;32m--> 337\u001b[0m obj, end \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mraw_decode(s, idx\u001b[38;5;241m=\u001b[39m_w(s, \u001b[38;5;241m0\u001b[39m)\u001b[38;5;241m.\u001b[39mend())\n\u001b[0;32m 338\u001b[0m end \u001b[38;5;241m=\u001b[39m _w(s, end)\u001b[38;5;241m.\u001b[39mend()\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\json\\decoder.py:355\u001b[0m, in \u001b[0;36mJSONDecoder.raw_decode\u001b[1;34m(self, s, idx)\u001b[0m\n\u001b[0;32m 354\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m \u001b[38;5;167;01mStopIteration\u001b[39;00m \u001b[38;5;28;01mas\u001b[39;00m err:\n\u001b[1;32m--> 355\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m JSONDecodeError(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mExpecting value\u001b[39m\u001b[38;5;124m\"\u001b[39m, s, err\u001b[38;5;241m.\u001b[39mvalue) \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m\n\u001b[0;32m 356\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m obj, end\n", - "\u001b[1;31mJSONDecodeError\u001b[0m: Expecting value: line 1 column 1 (char 0)", - "\nDuring handling of the above exception, another exception occurred:\n", - "\u001b[1;31mJSONDecodeError\u001b[0m Traceback (most recent call last)", - "Cell \u001b[1;32mIn[17], line 22\u001b[0m\n\u001b[0;32m 19\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m request\u001b[38;5;241m.\u001b[39mstatus_code \u001b[38;5;241m==\u001b[39m \u001b[38;5;241m404\u001b[39m:\n\u001b[0;32m 20\u001b[0m \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124mf\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;132;01m{\u001b[39;00msample_id\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m model not found\u001b[39m\u001b[38;5;124m\"\u001b[39m)\n\u001b[1;32m---> 22\u001b[0m item \u001b[38;5;241m=\u001b[39m request\u001b[38;5;241m.\u001b[39mjson()\n\u001b[0;32m 23\u001b[0m \u001b[38;5;28mprint\u001b[39m(item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mmessage\u001b[39m\u001b[38;5;124m'\u001b[39m])\n\u001b[0;32m 25\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m item[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mmessage\u001b[39m\u001b[38;5;124m'\u001b[39m] \u001b[38;5;241m==\u001b[39m \u001b[38;5;124m'\u001b[39m\u001b[38;5;124mValid Model.\u001b[39m\u001b[38;5;124m'\u001b[39m:\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\requests\\models.py:975\u001b[0m, in \u001b[0;36mResponse.json\u001b[1;34m(self, **kwargs)\u001b[0m\n\u001b[0;32m 971\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m complexjson\u001b[38;5;241m.\u001b[39mloads(\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mtext, \u001b[38;5;241m*\u001b[39m\u001b[38;5;241m*\u001b[39mkwargs)\n\u001b[0;32m 972\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m JSONDecodeError \u001b[38;5;28;01mas\u001b[39;00m e:\n\u001b[0;32m 973\u001b[0m \u001b[38;5;66;03m# Catch JSON-related errors and raise as requests.JSONDecodeError\u001b[39;00m\n\u001b[0;32m 974\u001b[0m \u001b[38;5;66;03m# This aliases json.JSONDecodeError and simplejson.JSONDecodeError\u001b[39;00m\n\u001b[1;32m--> 975\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m RequestsJSONDecodeError(e\u001b[38;5;241m.\u001b[39mmsg, e\u001b[38;5;241m.\u001b[39mdoc, e\u001b[38;5;241m.\u001b[39mpos)\n", - "\u001b[1;31mJSONDecodeError\u001b[0m: Expecting value: line 1 column 1 (char 0)" - ] - } - ], + "outputs": [], "source": [ "subj_procedures = {}\n", "\n", - "download_files = True\n", + "download_files = False\n", "\n", "\n", "if download_files:\n", @@ -1089,11 +95,17 @@ " request = requests.get(f\"http://aind-metadata-service/procedures/{sample_id}\")\n", " #TODO: check for invalid/missing models\n", "\n", - " if request.status_code == 404:\n", + " if request.status_code == 404 or request.status_code == 500:\n", " print(f\"{sample_id} model not found\")\n", + " continue\n", + "\n", + " print(f\"code: {request.status_code}\")\n", "\n", + " \n", " item = request.json()\n", - " print(item['message'])\n", + " # print(item['message'])\n", + " if not item or not item['data']:\n", + " continue\n", "\n", " if item['message'] == 'Valid Model.':\n", " with open(f'./original_spec_files/{sample_id}.json', 'w') as outfile:\n", @@ -1138,28 +150,11 @@ "metadata": {}, "outputs": [ { - "ename": "KeyError", - "evalue": "'Processed By:'", + "ename": "SyntaxError", + "evalue": "invalid syntax (598424608.py, line 48)", "output_type": "error", "traceback": [ - "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", - "\u001b[1;31mKeyError\u001b[0m Traceback (most recent call last)", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\base.py:3652\u001b[0m, in \u001b[0;36mIndex.get_loc\u001b[1;34m(self, key)\u001b[0m\n\u001b[0;32m 3651\u001b[0m \u001b[38;5;28;01mtry\u001b[39;00m:\n\u001b[1;32m-> 3652\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_engine\u001b[38;5;241m.\u001b[39mget_loc(casted_key)\n\u001b[0;32m 3653\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m \u001b[38;5;167;01mKeyError\u001b[39;00m \u001b[38;5;28;01mas\u001b[39;00m err:\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\_libs\\index.pyx:147\u001b[0m, in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[1;34m()\u001b[0m\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\_libs\\index.pyx:176\u001b[0m, in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[1;34m()\u001b[0m\n", - "File \u001b[1;32mpandas\\_libs\\hashtable_class_helper.pxi:7080\u001b[0m, in \u001b[0;36mpandas._libs.hashtable.PyObjectHashTable.get_item\u001b[1;34m()\u001b[0m\n", - "File \u001b[1;32mpandas\\_libs\\hashtable_class_helper.pxi:7088\u001b[0m, in \u001b[0;36mpandas._libs.hashtable.PyObjectHashTable.get_item\u001b[1;34m()\u001b[0m\n", - "\u001b[1;31mKeyError\u001b[0m: 'Processed By:'", - "\nThe above exception was the direct cause of the following exception:\n", - "\u001b[1;31mKeyError\u001b[0m Traceback (most recent call last)", - "Cell \u001b[1;32mIn[5], line 15\u001b[0m\n\u001b[0;32m 11\u001b[0m items \u001b[38;5;241m=\u001b[39m []\n\u001b[0;32m 14\u001b[0m \u001b[38;5;66;03m# general info\u001b[39;00m\n\u001b[1;32m---> 15\u001b[0m processor \u001b[38;5;241m=\u001b[39m row[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mProcessed By:\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 3_level_1\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 3_level_2\u001b[39m\u001b[38;5;124m'\u001b[39m]\n\u001b[0;32m 16\u001b[0m sample_id \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mstr\u001b[39m(row[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mSample\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 4_level_1\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 4_level_2\u001b[39m\u001b[38;5;124m'\u001b[39m])\n\u001b[0;32m 17\u001b[0m genotype \u001b[38;5;241m=\u001b[39m row[\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mGenotype\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 5_level_1\u001b[39m\u001b[38;5;124m'\u001b[39m][\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mUnnamed: 5_level_2\u001b[39m\u001b[38;5;124m'\u001b[39m]\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\series.py:1007\u001b[0m, in \u001b[0;36mSeries.__getitem__\u001b[1;34m(self, key)\u001b[0m\n\u001b[0;32m 1004\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_values[key]\n\u001b[0;32m 1006\u001b[0m \u001b[38;5;28;01melif\u001b[39;00m key_is_scalar:\n\u001b[1;32m-> 1007\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_get_value(key)\n\u001b[0;32m 1009\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m is_hashable(key):\n\u001b[0;32m 1010\u001b[0m \u001b[38;5;66;03m# Otherwise index.get_value will raise InvalidIndexError\u001b[39;00m\n\u001b[0;32m 1011\u001b[0m \u001b[38;5;28;01mtry\u001b[39;00m:\n\u001b[0;32m 1012\u001b[0m \u001b[38;5;66;03m# For labels that don't resolve as scalars like tuples and frozensets\u001b[39;00m\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\series.py:1116\u001b[0m, in \u001b[0;36mSeries._get_value\u001b[1;34m(self, label, takeable)\u001b[0m\n\u001b[0;32m 1113\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_values[label]\n\u001b[0;32m 1115\u001b[0m \u001b[38;5;66;03m# Similar to Index.get_value, but we do not fall back to positional\u001b[39;00m\n\u001b[1;32m-> 1116\u001b[0m loc \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mindex\u001b[38;5;241m.\u001b[39mget_loc(label)\n\u001b[0;32m 1118\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m is_integer(loc):\n\u001b[0;32m 1119\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_values[loc]\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\multi.py:2812\u001b[0m, in \u001b[0;36mMultiIndex.get_loc\u001b[1;34m(self, key)\u001b[0m\n\u001b[0;32m 2809\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m mask\n\u001b[0;32m 2811\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;129;01mnot\u001b[39;00m \u001b[38;5;28misinstance\u001b[39m(key, \u001b[38;5;28mtuple\u001b[39m):\n\u001b[1;32m-> 2812\u001b[0m loc \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_get_level_indexer(key, level\u001b[38;5;241m=\u001b[39m\u001b[38;5;241m0\u001b[39m)\n\u001b[0;32m 2813\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m _maybe_to_slice(loc)\n\u001b[0;32m 2815\u001b[0m keylen \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mlen\u001b[39m(key)\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\multi.py:3160\u001b[0m, in \u001b[0;36mMultiIndex._get_level_indexer\u001b[1;34m(self, key, level, indexer)\u001b[0m\n\u001b[0;32m 3157\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mslice\u001b[39m(i, j, step)\n\u001b[0;32m 3159\u001b[0m \u001b[38;5;28;01melse\u001b[39;00m:\n\u001b[1;32m-> 3160\u001b[0m idx \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_get_loc_single_level_index(level_index, key)\n\u001b[0;32m 3162\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m level \u001b[38;5;241m>\u001b[39m \u001b[38;5;241m0\u001b[39m \u001b[38;5;129;01mor\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_lexsort_depth \u001b[38;5;241m==\u001b[39m \u001b[38;5;241m0\u001b[39m:\n\u001b[0;32m 3163\u001b[0m \u001b[38;5;66;03m# Desired level is not sorted\u001b[39;00m\n\u001b[0;32m 3164\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28misinstance\u001b[39m(idx, \u001b[38;5;28mslice\u001b[39m):\n\u001b[0;32m 3165\u001b[0m \u001b[38;5;66;03m# test_get_loc_partial_timestamp_multiindex\u001b[39;00m\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\multi.py:2752\u001b[0m, in \u001b[0;36mMultiIndex._get_loc_single_level_index\u001b[1;34m(self, level_index, key)\u001b[0m\n\u001b[0;32m 2750\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;241m-\u001b[39m\u001b[38;5;241m1\u001b[39m\n\u001b[0;32m 2751\u001b[0m \u001b[38;5;28;01melse\u001b[39;00m:\n\u001b[1;32m-> 2752\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m level_index\u001b[38;5;241m.\u001b[39mget_loc(key)\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\aind_data_migration_scripts\\Lib\\site-packages\\pandas\\core\\indexes\\base.py:3654\u001b[0m, in \u001b[0;36mIndex.get_loc\u001b[1;34m(self, key)\u001b[0m\n\u001b[0;32m 3652\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_engine\u001b[38;5;241m.\u001b[39mget_loc(casted_key)\n\u001b[0;32m 3653\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m \u001b[38;5;167;01mKeyError\u001b[39;00m \u001b[38;5;28;01mas\u001b[39;00m err:\n\u001b[1;32m-> 3654\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m \u001b[38;5;167;01mKeyError\u001b[39;00m(key) \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01merr\u001b[39;00m\n\u001b[0;32m 3655\u001b[0m \u001b[38;5;28;01mexcept\u001b[39;00m \u001b[38;5;167;01mTypeError\u001b[39;00m:\n\u001b[0;32m 3656\u001b[0m \u001b[38;5;66;03m# If we have a listlike key, _check_indexing_error will raise\u001b[39;00m\n\u001b[0;32m 3657\u001b[0m \u001b[38;5;66;03m# InvalidIndexError. Otherwise we fall through and re-raise\u001b[39;00m\n\u001b[0;32m 3658\u001b[0m \u001b[38;5;66;03m# the TypeError.\u001b[39;00m\n\u001b[0;32m 3659\u001b[0m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_check_indexing_error(key)\n", - "\u001b[1;31mKeyError\u001b[0m: 'Processed By:'" + "\u001b[1;36m Cell \u001b[1;32mIn[5], line 48\u001b[1;36m\u001b[0m\n\u001b[1;33m pbs2_end =\u001b[0m\n\u001b[1;37m ^\u001b[0m\n\u001b[1;31mSyntaxError\u001b[0m\u001b[1;31m:\u001b[0m invalid syntax\n" ] } ], @@ -1178,6 +173,8 @@ "\n", " items = []\n", "\n", + " new_procedures = []\n", + "\n", " \n", " # general info\n", " processor = row['Processing Lead']\n", @@ -1189,49 +186,54 @@ "\n", " spec_maker = SpecMaker(processor, sample_id)\n", "\n", - " \n", - " \n", " \n", - " mbs_start = row['Gelation: MBS Start']\n", - " mbs_end = row['Gelation: MBS End']\n", - " acx_start = row['Gelation: AcX Start']\n", - " acx_end = row['Gelation: AcX End']\n", - " pbs_start = row['Gelation: PBS Wash Start']\n", - " pbs_end = row['Gelation: PBS Wash End']\n", - " stock_start = row['Gelation: Stock X + VA-044 Equilibration Start']\n", - " stock_end = row['Gelation: Stock X + VA-044 Equilibration End']\n", - " prok_rt_start = row['Gelation + ProK RT Start']\n", - " prok_rt_end = row['Gelation + ProK RT End']\n", - " prok_rt_time = row['Duration (days)']\n", - " prok_37c_start = row['Gelation + Add\\'l ProK 37C Start']\n", - " prok_37c_end = row['Gelation + Add\\'l ProK 37C End']\n", - " prok_37c_time = row['Duration (days) Gelation + Add\\'l ProK 37C 37C']\n", - " pbs2_start = row['PBS Wash Start']\n", - " pbs2_end = row['PBS Wash End']\n", - " pbs_stored = row['Date of Storage in PBS Az 0.05% @4C']\n", - " expansion_start = row['Expansion Start Date']\n", - " expansion_end = row['Expansion End Date']\n", - " notes1 = row['Notes']\n", - " notes2 = row['Notes II']\n", - " notes3 = row['Notes III']\n", + " gelation_start = row['Gelation: MBS Start']\n", + " gelation_end = row['PBS Wash End']\n", + "\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=gelation_start, \n", + " end=gelation_end, \n", + " procedure_type=SpecimenProcedureType.GELATION, \n", + " procedure_name=\"Gelation\",\n", + " protocol_id=\"unknown\",\n", + " reagent=[],\n", + " )\n", + " )\n", "\n", " # delipidation\n", - " dcm_delip_name = 'DCM Delipidation'\n", " dcm_delip_start = row['DCM Delipidation Start']\n", " dcm_delip_end = row['DCM Delipidation End']\n", - " items.append(basic_dict(dcm_delip_name, dcm_delip_start, dcm_delip_end, SpecimenProcedureType.DELIPIDATION))\n", + "\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=dcm_delip_start, \n", + " end=dcm_delip_end, \n", + " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", + " procedure_name=\"DCM Delipidation\",\n", + " protocol_id=\"unknown\",\n", + " reagent=[],\n", + " )\n", + " )\n", "\n", "\n", - " sbip_delip_name = 'SBiP Delipidation'\n", " sbip_delip_start = row['SBiP Delipidation Start']\n", " sbip_delip_end = row['SBiP Delipidation End']\n", - " items.append(basic_dict(sbip_delip_name, sbip_delip_start, sbip_delip_end, SpecimenProcedureType.DELIPIDATION))\n", + "\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=sbip_delip_start, \n", + " end=sbip_delip_end, \n", + " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", + " procedure_name=\"SBiP Delipidation\",\n", + " protocol_id=\"unknown\",\n", + " reagent=[],\n", + " )\n", + " )\n", + "\n", "\n", " # immunolabeling\n", - " immunolabeling_name = 'Immunolabeling'\n", " immuno_primary_antibody = row['Immuno: Primary Antibody']\n", - " immuno_secondary_antibody = row['Immunolabeling (31-33d)']['Unnamed: 14_level_1']['Secondary (20ug)']\n", - " # items.append(basic_dict(immunolabeling_name, immunolabeling_primary, immunolabeling_secondary, SpecimenProcedureType.IMMUNOLABELING))\n", " immuno_primary_mass = row['Mass of Primary Antibody used per Brain (ug)']\n", " immuno_primary_catalogue = row['Primary Antibody Catalog #']\n", " immuno_primary_lot = row['Primary Antibody Lot #']\n", @@ -1245,6 +247,27 @@ " fluorophore = row['Fluorophore']\n", " immuno_secondary_start = row['Immuno: Secondary Ab Start Date']\n", "\n", + " primary_fluorophore = None \n", + " if pd.isna(immuno_secondary_mass) or 'n/a' in immuno_secondary_mass: \n", + " primary_fluorophore = fluorophore\n", + "\n", + " immuno_primary = Immunolabeling(\n", + " antibody=Antibody(\n", + " immunolabel_class=ImmunolabelClass.PRIMARY,\n", + " fluorophore=primary_fluorophore\n", + " ),\n", + " concentration=,\n", + "\n", + " )\n", + "\n", + " \n", + " immuno_secondary = Immunolabeling(\n", + " antibody=Antibody(\n", + " immunolabel_class=ImmunolabelClass.SECONDARY,\n", + " fluorophore=fluorophore\n", + " )\n", + " )\n", + "\n", "\n", " specimen_procedures = []\n", " for item in items:\n", @@ -1262,7 +285,31 @@ "execution_count": null, "metadata": {}, "outputs": [], - "source": [] + "source": [ + "\n", + " # Gelation intermediary steps\n", + " mbs_end = row['Gelation: MBS End']\n", + " acx_start = row['Gelation: AcX Start']\n", + " acx_end = row['Gelation: AcX End']\n", + " pbs_start = row['Gelation: PBS Wash Start']\n", + " pbs_end = row['Gelation: PBS Wash End']\n", + " stock_start = row['Gelation: Stock X + VA-044 Equilibration Start']\n", + " stock_end = row['Gelation: Stock X + VA-044 Equilibration End']\n", + " prok_rt_start = row['Gelation + ProK RT Start']\n", + " prok_rt_end = row['Gelation + ProK RT End']\n", + " prok_rt_time = row['Duration (days)']\n", + " prok_37c_start = row['Gelation + Add\\'l ProK 37C Start']\n", + " prok_37c_end = row['Gelation + Add\\'l ProK 37C End']\n", + " prok_37c_time = row['Duration (days) Gelation + Add\\'l ProK 37C 37C']\n", + " pbs2_start = row['PBS Wash Start']\n", + " pbs2_end = \n", + " pbs_stored = row['Date of Storage in PBS Az 0.05% @4C']\n", + " expansion_start = row['Expansion Start Date']\n", + " expansion_end = row['Expansion End Date']\n", + " notes1 = row['Notes']\n", + " notes2 = row['Notes II']\n", + " notes3 = row['Notes III']" + ] }, { "cell_type": "code", From 017fd0234227e22ac5e6dc844a0b57eb0435a748 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Fri, 22 Mar 2024 17:02:51 -0400 Subject: [PATCH 20/43] Update .gitignore --- .gitignore | 1 + 1 file changed, 1 insertion(+) diff --git a/.gitignore b/.gitignore index 9d0f5c8d..3c73021f 100644 --- a/.gitignore +++ b/.gitignore @@ -28,6 +28,7 @@ share/python-wheels/ MANIFEST scripts/MRI_ingest scripts/Exaspim_ingest/original_spec_files +scripts/Exaspim_ingest/ExM Sample Tracking smartsheet.xlsx # PyInstaller # Usually these files are written by a python script from a template From 18daf056996e45deab0b3c8d95d878123fbf24e3 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Wed, 27 Mar 2024 13:10:31 -0400 Subject: [PATCH 21/43] index on feat-237-ingest-script-for-MRI: 700dbfa updates --- scripts/Exaspim_ingest/original_spec_files/652440_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/655145_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/655146_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/655147_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/659142_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/659145_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/661293_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/663410_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/663412_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/664762_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/665083_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/667352_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/667354_invalid.json | 1 + scripts/Exaspim_ingest/original_spec_files/667996_invalid.json | 1 + 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"anaesthesia": null, "workstation_id": null, "procedures": [{"injection_materials": [], "recovery_time": null, "recovery_time_unit": "minute", "injection_duration": null, "injection_duration_unit": "minute", "instrument_id": null, "procedure_type": "Retro-orbital injection", "injection_volume": null, "injection_volume_unit": "microliter", "injection_eye": null}], "notes": null}, {"procedure_type": "Surgery", "start_date": "2024-02-12", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"procedure_type": "Perfusion", "output_specimen_ids": ["715347"]}], "notes": null}], "specimen_procedures": [], "notes": null} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/original_spec_files/717444_invalid.json b/scripts/Exaspim_ingest/original_spec_files/717444_invalid.json new file mode 100644 index 00000000..f3061299 --- /dev/null +++ b/scripts/Exaspim_ingest/original_spec_files/717444_invalid.json @@ -0,0 +1 @@ +{"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", "schema_version": "0.11.5", "subject_id": "717444", "subject_procedures": [{"procedure_type": "Surgery", "start_date": "2024-01-02", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"injection_materials": [], "recovery_time": null, "recovery_time_unit": "minute", "injection_duration": null, "injection_duration_unit": "minute", "instrument_id": null, "procedure_type": "Retro-orbital injection", "injection_volume": null, "injection_volume_unit": "microliter", "injection_eye": null}], "notes": null}, {"procedure_type": "Surgery", "start_date": "2024-02-07", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"procedure_type": "Perfusion", "output_specimen_ids": ["717444"]}], "notes": null}], "specimen_procedures": [], "notes": null} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/original_spec_files/717445_invalid.json b/scripts/Exaspim_ingest/original_spec_files/717445_invalid.json new file mode 100644 index 00000000..5b823fce --- /dev/null +++ b/scripts/Exaspim_ingest/original_spec_files/717445_invalid.json @@ -0,0 +1 @@ +{"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", "schema_version": "0.11.5", "subject_id": "717445", "subject_procedures": [{"procedure_type": "Surgery", "start_date": "2024-01-02", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"injection_materials": [], "recovery_time": null, "recovery_time_unit": "minute", "injection_duration": null, "injection_duration_unit": "minute", "instrument_id": null, "procedure_type": "Retro-orbital injection", "injection_volume": null, "injection_volume_unit": "microliter", "injection_eye": null}], "notes": null}, {"procedure_type": "Surgery", "start_date": "2024-02-07", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"procedure_type": "Perfusion", "output_specimen_ids": ["717445"]}], "notes": null}], "specimen_procedures": [], "notes": null} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/original_spec_files/719652_invalid.json b/scripts/Exaspim_ingest/original_spec_files/719652_invalid.json new file mode 100644 index 00000000..8fcbf9eb --- /dev/null +++ b/scripts/Exaspim_ingest/original_spec_files/719652_invalid.json @@ -0,0 +1 @@ +{"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", "schema_version": "0.11.5", "subject_id": "719652", "subject_procedures": [{"procedure_type": "Surgery", "start_date": "2024-01-10", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"injection_materials": [], "recovery_time": null, "recovery_time_unit": "minute", "injection_duration": null, "injection_duration_unit": "minute", "instrument_id": null, "procedure_type": "Retro-orbital injection", "injection_volume": null, "injection_volume_unit": "microliter", "injection_eye": null}], "notes": null}, {"procedure_type": "Surgery", "start_date": "2024-02-14", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"procedure_type": "Perfusion", "output_specimen_ids": ["719652"]}], "notes": null}], "specimen_procedures": [], "notes": null} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/original_spec_files/719654_invalid.json b/scripts/Exaspim_ingest/original_spec_files/719654_invalid.json new file mode 100644 index 00000000..d4749863 --- /dev/null +++ b/scripts/Exaspim_ingest/original_spec_files/719654_invalid.json @@ -0,0 +1 @@ +{"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", "schema_version": "0.11.5", "subject_id": "719654", "subject_procedures": [{"procedure_type": "Surgery", "start_date": "2024-01-10", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"injection_materials": [], "recovery_time": null, "recovery_time_unit": "minute", "injection_duration": null, "injection_duration_unit": "minute", "instrument_id": null, "procedure_type": "Retro-orbital injection", "injection_volume": null, "injection_volume_unit": "microliter", "injection_eye": null}], "notes": null}, {"procedure_type": "Surgery", "start_date": "2024-02-14", "experimenter_full_name": "13040", "iacuc_protocol": "2109", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": null, "procedures": [{"procedure_type": "Perfusion", "output_specimen_ids": ["719654"]}], "notes": null}], "specimen_procedures": [], "notes": null} \ No newline at end of file From f833397c069541dd38cbff97e445115375c20691 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Wed, 27 Mar 2024 18:44:18 -0400 Subject: [PATCH 22/43] Update ingest_exaspim.ipynb --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index 936369ad..d104db7f 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -233,7 +233,7 @@ "\n", "\n", " # immunolabeling\n", - " immuno_primary_antibody = row['Immuno: Primary Antibody']\n", + " immuno_primary_antibody = row['Immuno: Primary Antibody1']\n", " immuno_primary_mass = row['Mass of Primary Antibody used per Brain (ug)']\n", " immuno_primary_catalogue = row['Primary Antibody Catalog #']\n", " immuno_primary_lot = row['Primary Antibody Lot #']\n", From e247efa0d2d8f9c483d70d3e491a92c43b17b0c7 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Wed, 3 Apr 2024 17:44:07 -0400 Subject: [PATCH 23/43] Update ingest_exaspim.ipynb --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 51 +++++++++++++++++++-- 1 file changed, 46 insertions(+), 5 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index d104db7f..0ae7d213 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -2,7 +2,7 @@ "cells": [ { "cell_type": "code", - "execution_count": 1, + "execution_count": 2, "metadata": {}, "outputs": [ { @@ -23,7 +23,7 @@ "import glob\n", "from enum import Enum\n", "\n", - "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, Immunolabeling, ImmunolabelClass, HCRSeries, Antibody\n", + "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody\n", "\n", "\n", "base = pd.read_excel(\"./ExM Sample Tracking smartsheet.xlsx\", sheet_name=\"ExM Sample Tracking\", header=[0], converters={})\n" @@ -233,9 +233,50 @@ "\n", "\n", " # immunolabeling\n", - " immuno_primary_antibody = row['Immuno: Primary Antibody1']\n", - " immuno_primary_mass = row['Mass of Primary Antibody used per Brain (ug)']\n", - " immuno_primary_catalogue = row['Primary Antibody Catalog #']\n", + "\n", + " immuno_primary_start = row[f'Immuno: Primary Ab Start Date']\n", + "\n", + " antibody_courses = {}\n", + " \n", + " for which in ['Primary', 'Secondary']\n", + " antibodies = []\n", + " for i in range(1, 4):\n", + " immuno_primary_antibody = row[f'Immuno: {which} Antibody{i}']\n", + " immuno_primary_mass = row[f'Mass of {which} Antibody{i} used per Brain (ug)']\n", + " immuno_primary_catalogue = row[f'{which} Antibody{i} Catalog #']\n", + " immuno_primary_lot = row[f'{which} Antibody{i} Lot #']\n", + "\n", + " antibodies.append(\n", + " Antibody(\n", + " \n", + " \n", + " )\n", + " )\n", + " \n", + "\n", + " if pd.isna(immuno_primary_antibody) or pd.isna(immuno_primary_start):\n", + " continue\n", + "\n", + "\n", + " antibody=Antibody(\n", + " immunolabel_class=ImmunolabelClass.PRIMARY,\n", + " fluorophore=None\n", + " ),\n", + " concentration=None,\n", + " )\n", + "\n", + " items.append(basic_dict(immuno_primary_antibody, immuno_primary_start, None, SpecimenProcedureType.IMMUNOLABELING))\n", + "\n", + "\n", + " immuno_primary_antibody1 = row['Immuno: Primary Antibody1']\n", + " immuno_primary_antibody2 = row['Immuno: Primary Antibody2']\n", + " immuno_primary_antibody2 = row['Immuno: Primary Antibody3']\n", + " immuno_primary_mass1 = row['Mass of Primary Antibody1 used per Brain (ug)']\n", + " immuno_primary_mass2 = row['Mass of Primary Antibody2 used per Brain (ug)']\n", + " immuno_primary_mass2 = row['Mass of Primary Antibody3 used per Brain (ug)']\n", + " immuno_primary_catalogue = row['Primary Antibody1 Catalog #']\n", + " immuno_primary_catalogue = row['Primary Antibody2 Catalog #']\n", + " immuno_primary_catalogue = row['Primary Antibody3 Catalog #']\n", " immuno_primary_lot = row['Primary Antibody Lot #']\n", " immuno_primary_rrid = row['Primary Antibody RRID']\n", " immuno_primary_start = row['Immuno: Primary Ab Start Date']\n", From 953065bb452d52ec02811d5cfd2b33b6dc814f83 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 4 Apr 2024 17:46:09 -0400 Subject: [PATCH 24/43] Update ingest_exaspim.ipynb --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 85 ++++++--------------- 1 file changed, 22 insertions(+), 63 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index 0ae7d213..dc1d64a9 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -238,76 +238,35 @@ "\n", " antibody_courses = {}\n", " \n", - " for which in ['Primary', 'Secondary']\n", + " for which in ['Primary', 'Secondary']:\n", " antibodies = []\n", " for i in range(1, 4):\n", - " immuno_primary_antibody = row[f'Immuno: {which} Antibody{i}']\n", - " immuno_primary_mass = row[f'Mass of {which} Antibody{i} used per Brain (ug)']\n", - " immuno_primary_catalogue = row[f'{which} Antibody{i} Catalog #']\n", - " immuno_primary_lot = row[f'{which} Antibody{i} Lot #']\n", + " immuno_antibody = row[f'Immuno: {which} Antibody{i}']\n", + " immuno_mass = row[f'Mass of {which} Antibody{i} used per Brain (ug)']\n", + " immuno_catalogue = row[f'{which} Antibody{i} Catalog #']\n", + " immuno_lot = row[f'{which} Antibody{i} Lot #']\n", + " fluorophore = None\n", + " if which == 'Secondary':\n", + " fluorophore = row[f'Fluorophore{i}']\n", "\n", - " antibodies.append(\n", - " Antibody(\n", - " \n", - " \n", - " )\n", - " )\n", - " \n", - "\n", - " if pd.isna(immuno_primary_antibody) or pd.isna(immuno_primary_start):\n", - " continue\n", - "\n", - "\n", - " antibody=Antibody(\n", - " immunolabel_class=ImmunolabelClass.PRIMARY,\n", - " fluorophore=None\n", - " ),\n", - " concentration=None,\n", - " )\n", + " info_row = antibody_df.loc[df['Lot#'] == immuno_lot]\n", "\n", - " items.append(basic_dict(immuno_primary_antibody, immuno_primary_start, None, SpecimenProcedureType.IMMUNOLABELING))\n", - "\n", - "\n", - " immuno_primary_antibody1 = row['Immuno: Primary Antibody1']\n", - " immuno_primary_antibody2 = row['Immuno: Primary Antibody2']\n", - " immuno_primary_antibody2 = row['Immuno: Primary Antibody3']\n", - " immuno_primary_mass1 = row['Mass of Primary Antibody1 used per Brain (ug)']\n", - " immuno_primary_mass2 = row['Mass of Primary Antibody2 used per Brain (ug)']\n", - " immuno_primary_mass2 = row['Mass of Primary Antibody3 used per Brain (ug)']\n", - " immuno_primary_catalogue = row['Primary Antibody1 Catalog #']\n", - " immuno_primary_catalogue = row['Primary Antibody2 Catalog #']\n", - " immuno_primary_catalogue = row['Primary Antibody3 Catalog #']\n", - " immuno_primary_lot = row['Primary Antibody Lot #']\n", - " immuno_primary_rrid = row['Primary Antibody RRID']\n", - " immuno_primary_start = row['Immuno: Primary Ab Start Date']\n", - " immuno_secondary_antibody = row['Immuno Secondary']\n", - " immuno_secondary_mass = row['Mass of Secondary Antibody used per Brain (ug)']\n", - " immuno_secondary_catalogue = row['Secondary Antibody Catalog #']\n", - " immuno_secondary_lot = row['Secondary Antibody Lot #']\n", - " immuno_secondary_rrid = row['Secondary Antibody RRID']\n", - " fluorophore = row['Fluorophore']\n", - " immuno_secondary_start = row['Immuno: Secondary Ab Start Date']\n", - "\n", - " primary_fluorophore = None \n", - " if pd.isna(immuno_secondary_mass) or 'n/a' in immuno_secondary_mass: \n", - " primary_fluorophore = fluorophore\n", - "\n", - " immuno_primary = Immunolabeling(\n", - " antibody=Antibody(\n", - " immunolabel_class=ImmunolabelClass.PRIMARY,\n", - " fluorophore=primary_fluorophore\n", - " ),\n", - " concentration=,\n", + " source = info_row['Company']\n", + " rrid = info_row['RRID']\n", "\n", - " )\n", + " # look up: source, RRID, concentration from aind_antibody masterlist\n", "\n", - " \n", - " immuno_secondary = Immunolabeling(\n", - " antibody=Antibody(\n", - " immunolabel_class=ImmunolabelClass.SECONDARY,\n", - " fluorophore=fluorophore\n", + " antibodies.append(\n", + " Antibody(\n", + " name=immuno_antibody,\n", + " source=source,\n", + " rrid=rrid,\n", + " lot_number=immuno_lot,\n", + " immunolabel_class=which,\n", + " fluorophore=fluorophore,\n", + " concentration=immuno_mass,\n", + " )\n", " )\n", - " )\n", "\n", "\n", " specimen_procedures = []\n", From e37a855056a9ab4bbd6e7be70ceb7119170f4445 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Fri, 12 Apr 2024 19:28:01 -0400 Subject: [PATCH 25/43] outputting rudimentary models --- .gitignore | 3 ++- .../AIND_AntibodyMasterList.xlsx | Bin 0 -> 20486 bytes .../ExM Sample Tracking smartsheet.xlsx | Bin 51134 -> 0 bytes .../Exaspim_ingest/ExM Sample Tracking.xlsx | Bin 48230 -> 80545 bytes tests/test_basic_job.py | 2 +- 5 files changed, 3 insertions(+), 2 deletions(-) create mode 100644 scripts/Exaspim_ingest/AIND_AntibodyMasterList.xlsx delete mode 100644 scripts/Exaspim_ingest/ExM Sample Tracking smartsheet.xlsx diff --git a/.gitignore b/.gitignore index 3c73021f..60178112 100644 --- a/.gitignore +++ b/.gitignore @@ -28,7 +28,8 @@ share/python-wheels/ MANIFEST scripts/MRI_ingest scripts/Exaspim_ingest/original_spec_files -scripts/Exaspim_ingest/ExM Sample Tracking smartsheet.xlsx +scripts/Exaspim_ingest/ExM Sample Tracking.xlsx +scripts/Exaspim_ingest/output # PyInstaller # Usually these files are written by a python script from a template diff --git a/scripts/Exaspim_ingest/AIND_AntibodyMasterList.xlsx b/scripts/Exaspim_ingest/AIND_AntibodyMasterList.xlsx new file mode 100644 index 0000000000000000000000000000000000000000..9ceec933bfc417b38539cc1b29b185895862d69b GIT binary patch literal 20486 zcmaHRb97|w(r;`#9ox2T+Y{TiZ95a&w(VqMPMl0Uv6GwkoO{>({`k)6)z$s%y>{2G z`c*w$wW~@|1{4ep2nq@c=)NXI6X<`uP`}qYBKCGJrgkp+s-6y}&U*A7wl*`WQg$Fr zNbi&5s}?r9NMgvK;k095RENNE+e4Zj$(u;ez8j#p!V#h&2~M}l%WBJXQwOJ`>sIj4 za)04*Zh@=%tMX&@SucD)b$1$In(nnXb_)!31lfPaoNPjAD%FgIxpIwp6DhjxlHMW> 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zi$#-|~JEBxhNf3KlkS1qa$silRk2t&ZTQUJ@28WQ8wl=`UhhRMm3O z^h)Bz%}gt*?W2gDobPok;X*qe0!T1yLy2Sx;rB81J?P>?z(Yzx!*&Zq`1vB7Qv%Q1 z_}4KH;=BC>b~@1-^UpuLB1SY9|P|Pj#v0Q^Ev?2t+|Zp!n-|1cYr2 z=u1HWJCzD8#%I~b2na&L^iGLk)l@nx;$LY=QJ^Y906eO{ za%u#q;0fMkA^j<-8FQOL>3`uQL0bd? zzC%&@SIUZtA^?#Ct|2PIJ-GaRgu9f7KcJ%t{{)5nI}zrV0dW`gpG%g1FyTpNQxX1c z0rM`vKUWQJ0e+=p{&lFO-9`Abhl7Tkv7szYE@8+gpmEiXsZ?F9{0xivXSj KQM}>T*?$44x#E`q diff --git a/tests/test_basic_job.py b/tests/test_basic_job.py index 42fe2b4d..a95afdc9 100644 --- a/tests/test_basic_job.py +++ b/tests/test_basic_job.py @@ -300,7 +300,7 @@ def test_add_processing_to_metadata( mock_datetime: MagicMock, mock_copyfile: MagicMock, mock_json_write: MagicMock, - mock_write_standard_file: MagicMock, + mock_dard_file: MagicMock, ): """Tests that the processing metadata files are compiled correctly.""" mock_datetime.now.return_value = datetime(2023, 4, 9) From acab98849ae778943c7a16b8634ed68e2d67475a Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Fri, 12 Apr 2024 19:28:27 -0400 Subject: [PATCH 26/43] Update ingest_exaspim.ipynb --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 1335 ++++++++++++++++++- 1 file changed, 1267 insertions(+), 68 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index dc1d64a9..6adb8623 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -2,9 +2,68 @@ "cells": [ { "cell_type": "code", - "execution_count": 2, + "execution_count": 1, "metadata": {}, "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + " Name Target Fluorophore \\\n", + "0 NaN Primaries NaN \n", + "1 NaN PRIMARY CONJUGATED NaN \n", + "2 Rabbit anti-GFP AF 488 Anti-GFP AlexaFluor 488 \n", + "3 Rabbit Anti-GFP AF 488 Anti-GFP AlexaFluor 488 \n", + "4 X Anti-tdT AF 568 Anti-tdT AlexaFluor 568 \n", + ".. ... ... ... \n", + "124 NaN Anti-Rabbit IgG (H+L) NaN \n", + "125 NaN Anti-Chicken IgY (H+L) NaN \n", + "126 NaN NaN NaN \n", + "127 NaN Anti-chicken IgY (H+L) NaN \n", + "128 Rabbit Anti-GFP Anti-GFP NaN \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# \\\n", + "0 NaN NaN NaN NaN NaN NaN \n", + "1 NaN NaN NaN NaN NaN NaN \n", + "2 Rabbit Polyclonal Invitrogen A-21311 AB_221477 2406548 \n", + "3 Rabbit Polyclonal Invitrogen A-21311 AB_221477 2413728 \n", + "4 X NaN Janelia NaN NaN NaN \n", + ".. ... ... ... ... ... ... \n", + "124 Donkey NaN Invitrogen A-21206 NaN 2330673 \n", + "125 Goat NaN Invitrogen A-21449 NaN 2420700 \n", + "126 Goat NaN Invitrogen A-11041 NaN 1622573 \n", + "127 Goat NaN Invitrogen A-11041 NaN 2335730 \n", + "128 Rabbit Polyclonal Abcam AB290 AB_303395 1037873-6 \n", + "\n", + " Amount Concentration # of vials Location Dilution \\\n", + "0 NaN NaN NaN NaN NaN \n", + "1 NaN NaN NaN NaN NaN \n", + "2 100 uL 2 mg/mL 1.0 4C NaN \n", + "3 100 uL 2 mg/mL 1.0 4C NaN \n", + "4 NaN 0.315ug/ul 1.0 -20C NaN \n", + ".. ... ... ... ... ... \n", + "124 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "125 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "126 500 uL NaN NaN NaN NaN \n", + "127 500 uL NaN NaN NaN NaN \n", + "128 50ul (0mg/ml) NaN 1.0 4C NaN \n", + "\n", + " Notes \n", + "0 NaN \n", + "1 NaN \n", + "2 primary conjugate \n", + "3 primary conjugate \n", + "4 Primary Conjugate From janelia. \"house-made\" \n", + ".. ... \n", + "124 NaN \n", + "125 NaN \n", + "126 NaN \n", + "127 NaN \n", + "128 Concentration : 5mg/mL \n", + "\n", + "[129 rows x 15 columns]\n" + ] + }, { "name": "stderr", "output_type": "stream", @@ -22,11 +81,17 @@ "from datetime import datetime\n", "import glob\n", "from enum import Enum\n", + "from pathlib import Path\n", "\n", - "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody\n", + "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures\n", "\n", + "from aind_data_schema.models.organizations import Organization\n", "\n", - "base = pd.read_excel(\"./ExM Sample Tracking smartsheet.xlsx\", sheet_name=\"ExM Sample Tracking\", header=[0], converters={})\n" + "\n", + "sample_sheet = pd.read_excel(\"./ExM Sample Tracking.xlsx\", sheet_name=\"ExM Sample Tracking\", header=[0], converters={})\n", + "\n", + "antibody_sheet = pd.read_excel(\"./AIND_AntibodyMasterList.xlsx\", sheet_name=\"AIND_AntibodyMasterList\", header=[0], converters={})\n", + "print(antibody_sheet)\n" ] }, { @@ -38,20 +103,34 @@ "name": "stdout", "output_type": "stream", "text": [ - "Index(['Auto', 'Submitted Priority', 'TRUE Priority', '#', 'External Sample',\n", + "Index(['Auto', 'TRUE Priority', 'Submitted Priority', '#', 'External Sample',\n", " 'Status', 'Processing Lead', 'Sample', 'Genotype', 'Label',\n", " 'Age of Injection', 'tTA Virus Dose', 'DCM Delipidation Start',\n", " 'DCM Delipidation End', 'SBiP Delipidation Start',\n", - " 'SBiP Delipidation End', 'Immuno: Primary Antibody',\n", - " 'Mass of Primary Antibody used per Brain (ug)',\n", - " 'Primary Antibody Catalog #', 'Primary Antibody Lot #',\n", - " 'Primary Antibody RRID', 'Immuno: Primary Ab Start Date',\n", - " 'Immuno Secondary', 'Mass of Secondary Antibody used per Brain (ug)',\n", - " 'Secondary Antibody Catalog #', 'Secondary Antibody Lot #',\n", - " 'Secondary Antibody RRID', 'Fluorophore',\n", - " 'Immuno: Secondary Ab Start Date', 'Gelation: MBS Start',\n", - " 'Gelation: MBS End', 'Gelation: AcX Start', 'Gelation: AcX End',\n", - " 'Gelation: PBS Wash Start', 'Gelation: PBS Wash End',\n", + " 'SBiP Delipidation End', 'Immuno: Primary Ab Start Date',\n", + " 'Immuno: Primary Antibody1',\n", + " 'Mass of Primary Antibody1 used per Brain (ug)',\n", + " 'Primary Antibody1 Catalog #', 'Primary Antibody1 Lot #',\n", + " 'Immuno: Primary Antibody2',\n", + " 'Mass of Primary Antibody2 used per Brain (ug)',\n", + " 'Primary Antibody2 Catalog #', 'Primary Antibody2 Lot #',\n", + " 'Immuno: Primary Antibody3',\n", + " 'Mass of Primary Antibody3 used per Brain (ug)',\n", + " 'Primary Antibody3 Catalog #', 'Primary Antibody3 Lot #',\n", + " 'Primary Antibody RRID', 'Immuno: Secondary Ab Start Date',\n", + " 'Immuno: Secondary Antibody1',\n", + " 'Mass of Secondary Antibody1 used per Brain (ug)',\n", + " 'Secondary Antibody1 Catalog #', 'Secondary Antibody1 Lot #',\n", + " 'Immuno: Secondary Antibody2',\n", + " 'Mass of Secondary Antibody2 used per Brain (ug)',\n", + " 'Secondary Antibody2 Catalog #', 'Secondary Antibody2 Lot #',\n", + " 'Immuno: Secondary Antibody3',\n", + " 'Mass of Secondary Antibody3 used per Brain (ug)',\n", + " 'Secondary Antibody3 Catalog #', 'Secondary Antibody3 Lot #',\n", + " 'Secondary Antibody RRID', 'Fluorophore1', 'Fluorophore2',\n", + " 'Fluorophore3', 'Gelation: MBS Start', 'Gelation: MBS End',\n", + " 'Gelation: AcX Start', 'Gelation: AcX End', 'Gelation: PBS Wash Start',\n", + " 'Gelation: PBS Wash End',\n", " 'Gelation: Stock X + VA-044 Equilibration Start',\n", " 'Gelation: Stock X + VA-044 Equilibration End',\n", " 'Gelation + ProK RT Start', 'Gelation + ProK RT End',\n", @@ -67,7 +146,7 @@ ], "source": [ "with pd.option_context(\"display.multi_sparse\", False):\n", - " print(base.columns)\n", + " print(sample_sheet.columns)\n", " " ] }, @@ -83,7 +162,7 @@ "\n", "\n", "if download_files:\n", - " for row_idx, row in base.iterrows(): \n", + " for row_idx, row in sample_sheet.iterrows(): \n", "\n", " sample_id = str(row['Sample'])\n", " print(sample_id)\n", @@ -121,13 +200,19 @@ "metadata": {}, "outputs": [], "source": [ + "from typing import List\n", + "\n", + "\n", "class SpecMaker():\n", " def __init__(self, experimenter, sample_id, existing_procedure:dict=None) -> None:\n", " self.experimenter = experimenter\n", " self.sample_id = sample_id\n", " self.existing_procedure = existing_procedure\n", " \n", - " def make_spec_procedure(self, start, end, procedure_type, procedure_name, notes=None, protocol_id=\"unknown\", reagent=[], immunolabeling:Immunolabeling=None, hcr_series:HCRSeries=None):\n", + " def make_spec_procedure(self, start, end, procedure_type, procedure_name, notes=None, protocol_id=[\"unknown\"], reagent=[], antibodies:List[Antibody]=None, hcr_series:HCRSeries=None):\n", + " print(start, end, self.sample_id, procedure_type, procedure_name, notes, protocol_id, antibodies)\n", + " if pd.isna(end):\n", + " end = start\n", " return SpecimenProcedure(\n", " procedure_type=procedure_type,\n", " procedure_name=procedure_name,\n", @@ -138,9 +223,31 @@ " protocol_id=protocol_id,\n", " reagents=reagent,\n", " hcr_series=hcr_series,\n", - " immunolabeling=immunolabeling,\n", + " antibodies=antibodies,\n", " notes=notes,\n", " )\n", + " \n", + " def load_spec_models(self, spec_models):\n", + " print(f'EXISTING PROCEDURE: {self.existing_procedure}')\n", + " print(f'SPEC MODELS: {spec_models}')\n", + " if len(self.existing_procedure.specimen_procedures) < 1:\n", + " self.existing_procedure.specimen_procedures = spec_models\n", + " else:\n", + " for model in spec_models:\n", + " self.existing_procedure.specimen_procedures.append(model)\n", + "\n", + " def make_procedures(self, path, spec_models):\n", + "\n", + " Procedures(\n", + " subject_id=self.sample_id,\n", + " subject_procedures=[],\n", + " specimen_procedures=spec_models,\n", + " notes=\"test build model\"\n", + " ).write_standard_file(\n", + " output_directory=path,\n", + " prefix=self.sample_id\n", + " )\n", + "\n", " " ] }, @@ -150,26 +257,1048 @@ "metadata": {}, "outputs": [ { - "ename": "SyntaxError", - "evalue": "invalid syntax (598424608.py, line 48)", + "name": "stdout", + "output_type": "stream", + "text": [ + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2021-11-10 00:00:00 2021-12-03 00:00:00 576404 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2021-10-01 00:00:00 2021-10-11 00:00:00 576404 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2021-10-25 00:00:00 2021-11-03 00:00:00 576404 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-05-05 00:00:00 2022-06-02 00:00:00 609105 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-01-21 00:00:00 2022-02-02 00:00:00 609105 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-02-03 00:00:00 2022-02-15 00:00:00 609105 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-07-21 00:00:00 2022-08-18 00:00:00 609107 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-04-12 00:00:00 2022-04-29 00:00:00 609107 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-05-05 00:00:00 2022-05-14 00:00:00 609107 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-07-21 00:00:00 2022-08-18 00:00:00 609281 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-04-12 00:00:00 2022-04-29 00:00:00 609281 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-05-05 00:00:00 2022-05-14 00:00:00 609281 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-07-21 00:00:00 2022-08-18 00:00:00 614978 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-04-12 00:00:00 2022-04-29 00:00:00 614978 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-05-05 00:00:00 2022-05-14 00:00:00 614978 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-07-21 00:00:00 2022-08-18 00:00:00 614980 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-04-12 00:00:00 2022-04-29 00:00:00 614980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-05-05 00:00:00 2022-05-14 00:00:00 614980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-07-21 00:00:00 2022-08-18 00:00:00 615296 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-04-12 00:00:00 2022-04-29 00:00:00 615296 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-05-05 00:00:00 2022-05-14 00:00:00 615296 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-06-16 00:00:00 2022-07-15 00:00:00 603033 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2021-12-26 00:00:00 2022-01-05 00:00:00 603033 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-01-05 00:00:00 2022-01-14 00:00:00 603033 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-09-23 00:00:00 2022-10-26 00:00:00 618584 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-06-10 00:00:00 2022-06-23 00:00:00 618584 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-06-27 00:00:00 2022-07-14 00:00:00 618584 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-11-08 00:00:00 2022-12-07 00:00:00 620631 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-06-21 00:00:00 2022-06-30 00:00:00 620631 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-07-06 00:00:00 2022-07-12 00:00:00 620631 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-11-09 00:00:00 2022-12-01 00:00:00 620629 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-06-21 00:00:00 2022-06-30 00:00:00 620629 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-07-06 00:00:00 2022-07-12 00:00:00 620629 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-02-01 00:00:00 2023-02-27 00:00:00 648860 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648860 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648860 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_1 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "62 0.257mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648861 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648861 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 648861 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648858 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648858 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 648858 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648862 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648862 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 648862 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-02-09 00:00:00 2023-03-08 00:00:00 648077 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648077 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648077 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-08 00:00:00 2023-02-06 00:00:00 648079 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648079 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648079 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 648079 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-08 00:00:00 2023-02-06 00:00:00 648698 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648698 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648698 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tdT ATTO 565\n", + "lot number AIAB_0003_1 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone \\\n", + "5 Goat Anti-tdT ATTO 565 Anti-tdTomato ATTO 565 Goat NaN \n", + "\n", + " Company Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "5 AIND AIAB_0003 NaN AIAB_0003_1 NaN .252 ug/ul 1.0 \n", + "\n", + " Location Dilution Notes \n", + "5 -20C NaN DOL = 5.2 Conjugated at AIND by KC / Tube is ... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 648698 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648699 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648699 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648700 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648700 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 648700 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-28 00:00:00 2023-06-03 00:00:00 648696 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648696 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648696 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-21 00:00:00 2023-03-21 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_2 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "63 0.234mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-05 00:00:00 2023-04-05 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648695 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648695 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-28 00:00:00 2023-06-03 00:00:00 648697 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-07 00:00:00 2022-11-17 00:00:00 648697 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-11-22 00:00:00 2022-12-06 00:00:00 648697 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-21 00:00:00 2023-03-21 00:00:00 648697 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_2 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "63 0.234mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-05 00:00:00 2023-04-05 00:00:00 648697 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-23 00:00:00 2023-02-20 00:00:00 651324 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-21 00:00:00 2022-12-05 00:00:00 651324 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-12-06 00:00:00 2022-12-18 00:00:00 651324 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 651324 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 651324 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-02-01 00:00:00 2023-02-27 00:00:00 651327 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-21 00:00:00 2022-12-05 00:00:00 651327 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-12-06 00:00:00 2022-12-18 00:00:00 651327 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-08 00:00:00 2023-02-05 00:00:00 650008 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-21 00:00:00 2022-12-05 00:00:00 650008 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-12-06 00:00:00 2022-12-18 00:00:00 650008 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tdT ATTO 565\n", + "lot number AIAB_0003_1 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone \\\n", + "5 Goat Anti-tdT ATTO 565 Anti-tdTomato ATTO 565 Goat NaN \n", + "\n", + " Company Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "5 AIND AIAB_0003 NaN AIAB_0003_1 NaN .252 ug/ul 1.0 \n", + "\n", + " Location Dilution Notes \n", + "5 -20C NaN DOL = 5.2 Conjugated at AIND by KC / Tube is ... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 650008 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-08 00:00:00 2023-02-04 00:00:00 650009 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-21 00:00:00 2022-12-05 00:00:00 650009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-12-06 00:00:00 2022-12-18 00:00:00 650009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tdT ATTO 565\n", + "lot number AIAB_0003_1 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone \\\n", + "5 Goat Anti-tdT ATTO 565 Anti-tdTomato ATTO 565 Goat NaN \n", + "\n", + " Company Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "5 AIND AIAB_0003 NaN AIAB_0003_1 NaN .252 ug/ul 1.0 \n", + "\n", + " Location Dilution Notes \n", + "5 -20C NaN DOL = 5.2 Conjugated at AIND by KC / Tube is ... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 650009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-02-09 00:00:00 2023-03-08 00:00:00 650010 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-21 00:00:00 2022-12-05 00:00:00 650010 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-12-06 00:00:00 2022-12-18 00:00:00 650010 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_1 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "62 0.257mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-23 00:00:00 2023-02-20 00:00:00 650011 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-11-21 00:00:00 2022-12-05 00:00:00 650011 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-12-06 00:00:00 2022-12-18 00:00:00 650011 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_1 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "62 0.257mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-12-15 00:00:00 2023-01-04 00:00:00 652779 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-04 00:00:00 2023-01-16 00:00:00 652779 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 652779 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-12-15 00:00:00 2023-01-04 00:00:00 652781 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-04 00:00:00 2023-01-16 00:00:00 652781 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 652781 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-21 00:00:00 2023-05-22 00:00:00 648434 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-12-15 00:00:00 2023-01-04 00:00:00 648434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-04 00:00:00 2023-01-16 00:00:00 648434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_2 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "63 0.234mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-30 00:00:00 2023-03-30 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-21 00:00:00 2023-05-17 00:00:00 648435 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-12-15 00:00:00 2023-01-04 00:00:00 648435 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-04 00:00:00 2023-01-16 00:00:00 648435 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_2 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "63 0.234mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-30 00:00:00 2023-03-30 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2022-12-15 00:00:00 2023-01-04 00:00:00 648436 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-04 00:00:00 2023-01-16 00:00:00 648436 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 648436 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-23 00:00:00 2023-05-25 00:00:00 651305 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-12-15 00:00:00 2023-01-04 00:00:00 651305 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-04 00:00:00 2023-01-16 00:00:00 651305 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 651305 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_1 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "62 0.257mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 651305 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 653432 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 653432 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rat anti-mTFP\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: Goat Anti-tDT\n", + "[Antibody(name='Rat anti-mTFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-30 00:00:00 2023-01-30 00:00:00 653432 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rat anti-mTFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Goat anti-Rat IgG (H+L) AF 647\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "[Antibody(name='Goat anti-Rat IgG (H+L) AF 647', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 647', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-02-15 00:00:00 2023-02-15 00:00:00 653432 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat anti-Rat IgG (H+L) AF 647', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 647', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-03-13 00:00:00 2023-04-17 00:00:00 653430 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 653430 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 653430 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-30 00:00:00 2023-01-30 00:00:00 653430 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-02-15 00:00:00 2023-02-15 00:00:00 653430 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-03-13 00:00:00 2023-04-17 00:00:00 653431 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 653431 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 653431 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-30 00:00:00 2023-01-30 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-02-15 00:00:00 2023-02-15 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-23 00:00:00 2023-05-25 00:00:00 653980 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 653980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 653980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 654727 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 654727 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 654727 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-23 00:00:00 2023-05-25 00:00:00 653981 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 653981 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 653981 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-23 00:00:00 2023-05-25 00:00:00 653159 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 653159 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 653159 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_1 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "62 0.257mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-21 00:00:00 2023-05-17 00:00:00 653158 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 653158 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 653158 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 653158 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_2 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "63 0.234mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-30 00:00:00 2023-03-30 00:00:00 653158 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658734', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-23 00:00:00 2023-05-25 00:00:00 658734 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 658734 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 658734 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 658734 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 658734 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-04-23 00:00:00 2023-05-25 00:00:00 658735 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-01-13 00:00:00 2023-01-21 00:00:00 658735 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-01-21 00:00:00 2023-01-28 00:00:00 658735 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-26 00:00:00 2023-02-16 00:00:00 613814 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-12-05 00:00:00 2022-12-14 00:00:00 613814 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-12-15 00:00:00 2022-12-23 00:00:00 613814 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_1 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "62 0.257mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-21 00:00:00 2023-01-21 00:00:00 613814 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-01-26 00:00:00 2023-02-16 00:00:00 618583 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2022-12-05 00:00:00 2022-12-14 00:00:00 618583 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2022-12-15 00:00:00 2022-12-23 00:00:00 618583 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_1 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "62 0.257mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-01-21 00:00:00 2023-01-21 00:00:00 618583 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-05-15 00:00:00 2023-06-19 00:00:00 659146 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 659146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 659146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-25 00:00:00 2023-04-25 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-05-10 00:00:00 2023-06-20 00:00:00 653153 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 653153 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 653153 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 653153 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_2 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "63 0.234mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-19 00:00:00 2023-04-19 00:00:00 653153 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-07-11 00:00:00 2023-08-09 00:00:00 660629 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 660629 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 660629 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 660629 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 660629 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-07-11 00:00:00 2023-08-09 00:00:00 660630 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 660630 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 660630 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-05-15 00:00:00 2023-06-19 00:00:00 657676 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 657676 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 657676 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-25 00:00:00 2023-04-25 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-05-15 00:00:00 2023-06-19 00:00:00 660950 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 660950 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 660950 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-25 00:00:00 2023-04-25 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-05-15 00:00:00 2023-06-19 00:00:00 651895 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 651895 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 651895 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-25 00:00:00 2023-04-25 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-05-10 00:00:00 2023-06-20 00:00:00 654306 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 654306 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 654306 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_2 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "63 0.234mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-19 00:00:00 2023-04-19 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-07-01 00:00:00 2023-08-09 00:00:00 661300 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 661300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 661300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-07-01 00:00:00 2023-08-09 00:00:00 660949 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 660949 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 660949 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-07-01 00:00:00 2023-08-09 00:00:00 651897 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 651897 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 651897 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-05-10 00:00:00 2023-06-20 00:00:00 654308 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-03-02 00:00:00 2023-03-14 00:00:00 654308 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "2023-03-14 00:00:00 2023-03-26 00:00:00 654308 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_2 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "63 0.234mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-19 00:00:00 2023-04-19 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-06-23 00:00:00 2023-07-21 00:00:00 665470 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-04-03 00:00:00 NaT 665470 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-06-23 00:00:00 2023-07-21 00:00:00 664761 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-04-03 00:00:00 NaT 664761 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-06-23 00:00:00 2023-07-21 00:00:00 665465 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-04-03 00:00:00 NaT 665465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_4 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "65 0.728mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 665465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-06-23 00:00:00 2023-07-21 00:00:00 665082 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-04-03 00:00:00 NaT 665082 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_4 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "65 0.728mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 665082 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-06-23 00:00:00 2023-07-21 00:00:00 665081 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-04-03 00:00:00 NaT 665081 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_4 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "65 0.728mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-06-23 00:00:00 2023-07-21 00:00:00 652441 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-04-03 00:00:00 NaT 652441 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_4 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "65 0.728mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-06-23 00:00:00 2023-07-21 00:00:00 652445 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-04-03 00:00:00 NaT 652445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "immuno anti: Goat Anti-tDT\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_4 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "65 0.728mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 652445 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-06-23 00:00:00 2023-07-21 00:00:00 660625 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-04-03 00:00:00 NaT 660625 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 660625 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['unknown'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 660625 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "2023-06-23 00:00:00 2023-07-21 00:00:00 660627 SpecimenProcedureType.GELATION Gelation None ['unknown'] None\n", + "2023-04-03 00:00:00 NaT 660627 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['unknown'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 660627 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['unknown'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='Unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n" + ] + }, + { + "ename": "FileNotFoundError", + "evalue": "[Errno 2] No such file or directory: './original_spec_files/516429_invalid.json'", "output_type": "error", "traceback": [ - "\u001b[1;36m Cell \u001b[1;32mIn[5], line 48\u001b[1;36m\u001b[0m\n\u001b[1;33m pbs2_end =\u001b[0m\n\u001b[1;37m ^\u001b[0m\n\u001b[1;31mSyntaxError\u001b[0m\u001b[1;31m:\u001b[0m invalid syntax\n" + "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", + "\u001b[1;31mFileNotFoundError\u001b[0m Traceback (most recent call last)", + "Cell \u001b[1;32mIn[5], line 22\u001b[0m\n\u001b[0;32m 19\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28mlen\u001b[39m(sample_id) \u001b[38;5;241m!=\u001b[39m \u001b[38;5;241m6\u001b[39m:\n\u001b[0;32m 20\u001b[0m \u001b[38;5;28;01mcontinue\u001b[39;00m \n\u001b[1;32m---> 22\u001b[0m \u001b[38;5;28;01mwith\u001b[39;00m \u001b[38;5;28mopen\u001b[39m(\u001b[38;5;124mf\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124m./original_spec_files/\u001b[39m\u001b[38;5;132;01m{\u001b[39;00msample_id\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m_invalid.json\u001b[39m\u001b[38;5;124m'\u001b[39m, \u001b[38;5;124m'\u001b[39m\u001b[38;5;124mr\u001b[39m\u001b[38;5;124m'\u001b[39m) \u001b[38;5;28;01mas\u001b[39;00m infile:\n\u001b[0;32m 23\u001b[0m data \u001b[38;5;241m=\u001b[39m json\u001b[38;5;241m.\u001b[39mload(infile)\n\u001b[0;32m 25\u001b[0m \u001b[38;5;28mprint\u001b[39m(data)\n", + "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\IPython\\core\\interactiveshell.py:286\u001b[0m, in \u001b[0;36m_modified_open\u001b[1;34m(file, *args, **kwargs)\u001b[0m\n\u001b[0;32m 279\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m file \u001b[38;5;129;01min\u001b[39;00m {\u001b[38;5;241m0\u001b[39m, \u001b[38;5;241m1\u001b[39m, \u001b[38;5;241m2\u001b[39m}:\n\u001b[0;32m 280\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m \u001b[38;5;167;01mValueError\u001b[39;00m(\n\u001b[0;32m 281\u001b[0m \u001b[38;5;124mf\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mIPython won\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mt let you open fd=\u001b[39m\u001b[38;5;132;01m{\u001b[39;00mfile\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m by default \u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 282\u001b[0m \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mas it is likely to crash IPython. If you know what you are doing, \u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 283\u001b[0m \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124myou can use builtins\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124m open.\u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 284\u001b[0m )\n\u001b[1;32m--> 286\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m io_open(file, \u001b[38;5;241m*\u001b[39margs, \u001b[38;5;241m*\u001b[39m\u001b[38;5;241m*\u001b[39mkwargs)\n", + "\u001b[1;31mFileNotFoundError\u001b[0m: [Errno 2] No such file or directory: './original_spec_files/516429_invalid.json'" ] } ], "source": [ + "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, Surgery\n", "\n", - "\n", - "def basic_dict(name, start, end, type) -> dict:\n", - " return {\n", - " \"procedure_name\": name,\n", - " \"start_date\": start,\n", - " \"end_date\": end,\n", - " \"procedure_type\": type,\n", - " }\n", - "\n", - "for row_idx, row in base.iterrows():\n", + "for row_idx, row in sample_sheet.iterrows():\n", "\n", " items = []\n", "\n", @@ -184,52 +1313,85 @@ " inj_age = row['Age of Injection']\n", " tta_virus_dose = row['tTA Virus Dose']\n", "\n", + "\n", + " if len(sample_id) != 6:\n", + " continue \n", + "\n", + " with open(f'./original_spec_files/{sample_id}_invalid.json', 'r') as infile:\n", + " data = json.load(infile)\n", + "\n", + " print(data)\n", + "\n", + " if str(data.get('subject_id', None)) != sample_id:\n", + " print(f\"subject_id mismatch: {data.get('subject_id', None)} != {sample_id}.\")\n", + "\n", + " # original_subj_procedures = []\n", + " # for item in data.get('subject_procedures', []):\n", + " # if 'protocol_id' not in item.keys():\n", + " # item['protocol_id'] = \"unknown\"\n", + " \n", + " # for procedure in item['procedures']:\n", + " # if 'protocol_id' not in procedure.keys():\n", + " # procedure['protocol_id'] = \"unknown\"\n", + "\n", + " # original_subj_procedures.append(item)\n", + "\n", + "\n", + " # print(original_subj_procedures)\n", + "\n", + " # original_procedure = Procedures(\n", + " # subject_id=data.get('subject_id', sample_id),\n", + " # subject_procedures=original_subj_procedures,\n", + " # specimen_procedures=data.get('specimen_procedures', []),\n", + " # notes=data.get('notes', None),\n", + " # )\n", + "\n", " spec_maker = SpecMaker(processor, sample_id)\n", "\n", " \n", " gelation_start = row['Gelation: MBS Start']\n", " gelation_end = row['PBS Wash End']\n", "\n", - " new_procedures.append(\n", - " spec_maker.make_spec_procedure(\n", - " start=gelation_start, \n", - " end=gelation_end, \n", - " procedure_type=SpecimenProcedureType.GELATION, \n", - " procedure_name=\"Gelation\",\n", - " protocol_id=\"unknown\",\n", - " reagent=[],\n", + " if not pd.isna(gelation_start):\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=gelation_start, \n", + " end=gelation_end, \n", + " procedure_type=SpecimenProcedureType.GELATION, \n", + " procedure_name=\"Gelation\",\n", + " reagent=[],\n", + " )\n", " )\n", - " )\n", "\n", " # delipidation\n", " dcm_delip_start = row['DCM Delipidation Start']\n", " dcm_delip_end = row['DCM Delipidation End']\n", "\n", - " new_procedures.append(\n", - " spec_maker.make_spec_procedure(\n", - " start=dcm_delip_start, \n", - " end=dcm_delip_end, \n", - " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", - " procedure_name=\"DCM Delipidation\",\n", - " protocol_id=\"unknown\",\n", - " reagent=[],\n", + " if not pd.isna(dcm_delip_start):\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=dcm_delip_start, \n", + " end=dcm_delip_end, \n", + " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", + " procedure_name=\"DCM Delipidation\",\n", + " reagent=[],\n", + " )\n", " )\n", - " )\n", "\n", "\n", " sbip_delip_start = row['SBiP Delipidation Start']\n", " sbip_delip_end = row['SBiP Delipidation End']\n", "\n", - " new_procedures.append(\n", - " spec_maker.make_spec_procedure(\n", - " start=sbip_delip_start, \n", - " end=sbip_delip_end, \n", - " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", - " procedure_name=\"SBiP Delipidation\",\n", - " protocol_id=\"unknown\",\n", - " reagent=[],\n", + " if not pd.isna(sbip_delip_start):\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=sbip_delip_start, \n", + " end=sbip_delip_end, \n", + " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", + " procedure_name=\"SBiP Delipidation\",\n", + " reagent=[],\n", + " )\n", " )\n", - " )\n", "\n", "\n", " # immunolabeling\n", @@ -240,8 +1402,14 @@ " \n", " for which in ['Primary', 'Secondary']:\n", " antibodies = []\n", + " start_date = row[f'Immuno: {which} Ab Start Date']\n", + " if pd.isna(start_date):\n", + " continue\n", " for i in range(1, 4):\n", " immuno_antibody = row[f'Immuno: {which} Antibody{i}']\n", + " print(f'immuno anti: {immuno_antibody}')\n", + " if pd.isna(immuno_antibody):\n", + " continue\n", " immuno_mass = row[f'Mass of {which} Antibody{i} used per Brain (ug)']\n", " immuno_catalogue = row[f'{which} Antibody{i} Catalog #']\n", " immuno_lot = row[f'{which} Antibody{i} Lot #']\n", @@ -249,13 +1417,32 @@ " if which == 'Secondary':\n", " fluorophore = row[f'Fluorophore{i}']\n", "\n", - " info_row = antibody_df.loc[df['Lot#'] == immuno_lot]\n", + " if not pd.isna(immuno_lot) and immuno_lot in antibody_sheet['Lot#'].tolist():\n", + " print(f'lot number {immuno_lot} found in antibody sheet')\n", + " info_row = antibody_sheet.loc[antibody_sheet['Lot#'] == immuno_lot]\n", "\n", - " source = info_row['Company']\n", - " rrid = info_row['RRID']\n", + " print(f'info row: {info_row}')\n", + "\n", + " source = Organization.from_abbreviation(info_row['Company'].values[0])\n", + " print(f'source: {source}')\n", + " rrid = info_row['RRID'].values[0]\n", + " if pd.isna(rrid):\n", + " rrid = None\n", + " else:\n", + " immuno_lot = 'Unknown'\n", + " source = Organization.OTHER\n", + " rrid = None\n", "\n", " # look up: source, RRID, concentration from aind_antibody masterlist\n", + " \n", + " if not pd.isna(fluorophore):\n", + " fluorophore = fluorophore.replace('AF', 'Alexa Fluor')\n", + " if pd.isna(fluorophore):\n", + " fluorophore = None\n", "\n", + " if pd.isna(immuno_mass):\n", + " continue\n", + " \n", " antibodies.append(\n", " Antibody(\n", " name=immuno_antibody,\n", @@ -267,16 +1454,28 @@ " concentration=immuno_mass,\n", " )\n", " )\n", + " \n", + " if len(antibodies) < 1:\n", + " continue\n", "\n", + " print(antibodies)\n", "\n", - " specimen_procedures = []\n", - " for item in items:\n", - " print(item)\n", - " if pd.isna(item['start_date']) or pd.isna(item['end_date']):\n", - " continue\n", - " specimen_procedures.append(spec_maker.make_spec_procedure(item['start_date'], item['end_date'], item['procedure_type'], item['procedure_name']))\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=start_date, \n", + " end=start_date, \n", + " procedure_type=SpecimenProcedureType.IMMUNOLABELING, \n", + " procedure_name=f\"{which} Antibody Immunolabeling\",\n", + " protocol_id=[\"unknown\"],\n", + " reagent=[],\n", + " antibodies=antibodies,\n", + " )\n", + " )\n", + "\n", + "\n", + " # spec_maker.load_spec_models(new_procedures)\n", + " spec_maker.make_procedures(Path(\"output\"), new_procedures)\n", " \n", - " print(specimen_procedures)\n", "\n" ] }, From 75433f9517cca7830e6b71b4b0c4a652c65f9a39 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Tue, 23 Apr 2024 13:27:51 -0400 Subject: [PATCH 27/43] adding injection materials --- .../Mouse Tracker - RO injections.xlsx | Bin 0 -> 81501 bytes scripts/Exaspim_ingest/ingest_exaspim.ipynb | 4836 +++++++++++++++-- .../ingest_exaspim_materials.ipynb | 255 + 3 files changed, 4614 insertions(+), 477 deletions(-) create mode 100644 scripts/Exaspim_ingest/Mouse Tracker - RO injections.xlsx 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\u001b[38;5;28mopen\u001b[39m(\u001b[38;5;124mf\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124m./original_spec_files/\u001b[39m\u001b[38;5;132;01m{\u001b[39;00msample_id\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m_invalid.json\u001b[39m\u001b[38;5;124m'\u001b[39m, \u001b[38;5;124m'\u001b[39m\u001b[38;5;124mr\u001b[39m\u001b[38;5;124m'\u001b[39m) \u001b[38;5;28;01mas\u001b[39;00m infile:\n\u001b[0;32m 23\u001b[0m data \u001b[38;5;241m=\u001b[39m json\u001b[38;5;241m.\u001b[39mload(infile)\n\u001b[0;32m 25\u001b[0m \u001b[38;5;28mprint\u001b[39m(data)\n", - "File \u001b[1;32mc:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\IPython\\core\\interactiveshell.py:286\u001b[0m, in \u001b[0;36m_modified_open\u001b[1;34m(file, *args, **kwargs)\u001b[0m\n\u001b[0;32m 279\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m file \u001b[38;5;129;01min\u001b[39;00m {\u001b[38;5;241m0\u001b[39m, \u001b[38;5;241m1\u001b[39m, \u001b[38;5;241m2\u001b[39m}:\n\u001b[0;32m 280\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m \u001b[38;5;167;01mValueError\u001b[39;00m(\n\u001b[0;32m 281\u001b[0m \u001b[38;5;124mf\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mIPython won\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mt let you open fd=\u001b[39m\u001b[38;5;132;01m{\u001b[39;00mfile\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m by default \u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 282\u001b[0m \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mas it is likely to crash IPython. If you know what you are doing, \u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 283\u001b[0m \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124myou can use builtins\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124m open.\u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 284\u001b[0m )\n\u001b[1;32m--> 286\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m io_open(file, \u001b[38;5;241m*\u001b[39margs, \u001b[38;5;241m*\u001b[39m\u001b[38;5;241m*\u001b[39mkwargs)\n", - "\u001b[1;31mFileNotFoundError\u001b[0m: [Errno 2] No such file or directory: './original_spec_files/516429_invalid.json'" + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" ] - } - ], - "source": [ - "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, Surgery\n", - "\n", - "for row_idx, row in sample_sheet.iterrows():\n", - "\n", - " items = []\n", - "\n", - " new_procedures = []\n", - "\n", - " \n", - " # general info\n", - " processor = row['Processing Lead']\n", - " sample_id = str(row['Sample'])\n", - " genotype = row['Genotype']\n", - " label = row['Label']\n", - " inj_age = row['Age of Injection']\n", - " tta_virus_dose = row['tTA Virus Dose']\n", - "\n", - "\n", - " if len(sample_id) != 6:\n", - " continue \n", - "\n", - " with open(f'./original_spec_files/{sample_id}_invalid.json', 'r') as infile:\n", - " data = json.load(infile)\n", - "\n", - " print(data)\n", - "\n", - " if str(data.get('subject_id', None)) != sample_id:\n", - " print(f\"subject_id mismatch: {data.get('subject_id', None)} != {sample_id}.\")\n", - "\n", - " # original_subj_procedures = []\n", - " # for item in data.get('subject_procedures', []):\n", - " # if 'protocol_id' not in item.keys():\n", - " # item['protocol_id'] = \"unknown\"\n", - " \n", - " # for procedure in item['procedures']:\n", - " # if 'protocol_id' not in procedure.keys():\n", - " # procedure['protocol_id'] = \"unknown\"\n", - "\n", - " # original_subj_procedures.append(item)\n", - "\n", - "\n", - " # print(original_subj_procedures)\n", - "\n", - " # original_procedure = Procedures(\n", - " # subject_id=data.get('subject_id', sample_id),\n", - " # subject_procedures=original_subj_procedures,\n", - " # specimen_procedures=data.get('specimen_procedures', []),\n", - " # notes=data.get('notes', None),\n", - " # )\n", - "\n", - " spec_maker = SpecMaker(processor, sample_id)\n", - "\n", - " \n", - " gelation_start = row['Gelation: MBS Start']\n", - " gelation_end = row['PBS Wash End']\n", - "\n", - " if not pd.isna(gelation_start):\n", - " new_procedures.append(\n", - " spec_maker.make_spec_procedure(\n", - " start=gelation_start, \n", - " end=gelation_end, \n", - " procedure_type=SpecimenProcedureType.GELATION, \n", - " procedure_name=\"Gelation\",\n", - " reagent=[],\n", - " )\n", - " )\n", - "\n", - " # delipidation\n", - " dcm_delip_start = row['DCM Delipidation Start']\n", - " dcm_delip_end = row['DCM Delipidation End']\n", - "\n", - " if not pd.isna(dcm_delip_start):\n", - " new_procedures.append(\n", - " spec_maker.make_spec_procedure(\n", - " start=dcm_delip_start, \n", - " end=dcm_delip_end, \n", - " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", - " procedure_name=\"DCM Delipidation\",\n", - " reagent=[],\n", - " )\n", - " )\n", - "\n", - "\n", - " sbip_delip_start = row['SBiP Delipidation Start']\n", - " sbip_delip_end = row['SBiP Delipidation End']\n", - "\n", - " if not pd.isna(sbip_delip_start):\n", - " new_procedures.append(\n", - " spec_maker.make_spec_procedure(\n", - " start=sbip_delip_start, \n", - " end=sbip_delip_end, \n", - " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", - " procedure_name=\"SBiP Delipidation\",\n", - " reagent=[],\n", - " )\n", - " )\n", - "\n", - "\n", - " # immunolabeling\n", - "\n", - " immuno_primary_start = row[f'Immuno: Primary Ab Start Date']\n", - "\n", - " antibody_courses = {}\n", - " \n", - " for which in ['Primary', 'Secondary']:\n", - " antibodies = []\n", - " start_date = row[f'Immuno: {which} Ab Start Date']\n", - " if pd.isna(start_date):\n", + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "file not found for 663412\n", + "[]\n", + "2023-11-10 00:00:00 2023-12-14 00:00:00 663412 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-14 00:00:00 2023-07-27 00:00:00 663412 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-07-28 00:00:00 2023-08-08 00:00:00 663412 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 675057\n", + "[]\n", + "2023-11-10 00:00:00 2023-12-14 00:00:00 675057 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-14 00:00:00 2023-07-27 00:00:00 675057 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-07-28 00:00:00 2023-08-08 00:00:00 675057 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 664762\n", + "[]\n", + "2023-10-04 00:00:00 2023-11-02 00:00:00 664762 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-14 00:00:00 2023-07-27 00:00:00 664762 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-07-28 00:00:00 2023-08-08 00:00:00 664762 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 667352\n", + "[]\n", + "2023-10-04 00:00:00 2023-11-02 00:00:00 667352 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-14 00:00:00 2023-07-27 00:00:00 667352 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-07-28 00:00:00 2023-08-08 00:00:00 667352 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 670944\n", + "[]\n", + "2023-10-04 00:00:00 2023-11-02 00:00:00 670944 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-14 00:00:00 2023-07-27 00:00:00 670944 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-07-28 00:00:00 2023-08-08 00:00:00 670944 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 670471\n", + "[]\n", + "2023-10-06 00:00:00 2023-11-08 00:00:00 670471 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 670471 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 670471 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 670339\n", + "[]\n", + "2023-09-27 00:00:00 2023-10-26 00:00:00 670339 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 670339 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 670339 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Chicken Anti-GFP\n", + "lot number GR361051-16 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "13 Chicken Anti-GFP Anti-GFP NaN Chicken NaN Abcam \n", + "123 NaN Anti-GFP NaN Chicken NaN Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration \\\n", + "13 ab13970 AB_300798 GR361051-16 100 uL 10 mg/mL \n", + "123 ab13970 NaN GR361051-16 100 uL (10 mg/mL) NaN \n", + "\n", + " # of vials Location Dilution \\\n", + "13 1.0 4C Dilute 1:5000 \n", + "123 NaN NaN NaN \n", + "\n", + " Notes \n", + "13 1:5000 dilution works well for me (NDO) \n", + "123 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Chicken IgY (H+L) AF 488\n", + "lot number 165794 found in antibody sheet\n", + "info row: Name Target \\\n", + "53 Donkey anti-Chicken IgY (H+L) AF 488 Anti-Chicken IgY (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# \\\n", + "53 Alexa Fluorâ„¢ 488 Donkey NaN Jackson Immuno 703-545-155 \n", + "\n", + " RRID Lot# Amount Concentration # of vials Location Dilution \\\n", + "53 AB_2340375 165794 500 uL 1.5 mg/mL 1.0 -20 1:500 \n", + "\n", + " Notes \n", + "53 1:500 works well for me (NDO); 20ul aliquots d... \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 670344\n", + "[]\n", + "2023-10-02 00:00:00 2023-11-02 00:00:00 670344 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 670344 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 670344 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Chicken Anti-GFP\n", + "lot number GR361051-16 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "13 Chicken Anti-GFP Anti-GFP NaN Chicken NaN Abcam \n", + "123 NaN Anti-GFP NaN Chicken NaN Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration \\\n", + "13 ab13970 AB_300798 GR361051-16 100 uL 10 mg/mL \n", + "123 ab13970 NaN GR361051-16 100 uL (10 mg/mL) NaN \n", + "\n", + " # of vials Location Dilution \\\n", + "13 1.0 4C Dilute 1:5000 \n", + "123 NaN NaN NaN \n", + "\n", + " Notes \n", + "13 1:5000 dilution works well for me (NDO) \n", + "123 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Chicken IgY (H+L) AF 488\n", + "lot number 165794 found in antibody sheet\n", + "info row: Name Target \\\n", + "53 Donkey anti-Chicken IgY (H+L) AF 488 Anti-Chicken IgY (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# \\\n", + "53 Alexa Fluorâ„¢ 488 Donkey NaN Jackson Immuno 703-545-155 \n", + "\n", + " RRID Lot# Amount Concentration # of vials Location Dilution \\\n", + "53 AB_2340375 165794 500 uL 1.5 mg/mL 1.0 -20 1:500 \n", + "\n", + " Notes \n", + "53 1:500 works well for me (NDO); 20ul aliquots d... \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 681465\n", + "[]\n", + "2023-09-27 00:00:00 2023-10-26 00:00:00 681465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 681465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 681465 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 681469\n", + "[]\n", + "2023-10-02 00:00:00 2023-11-02 00:00:00 681469 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 681469 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 681469 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 676009\n", + "[]\n", + "2023-09-27 00:00:00 2023-10-26 00:00:00 676009 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 676009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 676009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 676007\n", + "[]\n", + "2023-10-02 00:00:00 2023-11-02 00:00:00 676007 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 676007 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 676007 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 671477\n", + "[]\n", + "2023-11-09 00:00:00 2023-12-14 00:00:00 671477 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 671477 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 671477 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645.0 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 670808\n", + "[]\n", + "2023-11-09 00:00:00 2023-12-14 00:00:00 670808 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 670808 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 670808 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645.0 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 670809\n", + "[]\n", + "2023-11-09 00:00:00 2023-12-14 00:00:00 670809 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-07-20 00:00:00 2023-08-02 00:00:00 670809 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-03 00:00:00 2023-08-14 00:00:00 670809 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645.0 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 674741\n", + "[]\n", + "2023-11-14 00:00:00 2023-12-14 00:00:00 674741 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-08-17 00:00:00 2023-08-29 00:00:00 674741 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-31 00:00:00 2023-09-12 00:00:00 674741 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_4 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "65 0.728mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 659142\n", + "[]\n", + "2023-11-14 00:00:00 2023-12-14 00:00:00 659142 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-08-17 00:00:00 2023-08-29 00:00:00 659142 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-31 00:00:00 2023-09-12 00:00:00 659142 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: #NO MATCH\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 663410\n", + "[]\n", + "2023-11-17 00:00:00 2023-12-22 00:00:00 663410 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-08-17 00:00:00 2023-08-29 00:00:00 663410 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-31 00:00:00 2023-09-12 00:00:00 663410 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_4 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "65 0.728mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 673998\n", + "[]\n", + "2023-11-17 00:00:00 2023-12-22 00:00:00 673998 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-08-17 00:00:00 2023-08-29 00:00:00 673998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-31 00:00:00 2023-09-12 00:00:00 673998 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 655147\n", + "[]\n", + "2023-11-17 00:00:00 2023-12-22 00:00:00 655147 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-08-17 00:00:00 2023-08-29 00:00:00 655147 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-31 00:00:00 2023-09-12 00:00:00 655147 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 673996\n", + "[]\n", + "2023-11-17 00:00:00 2023-12-22 00:00:00 673996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-08-17 00:00:00 2023-08-29 00:00:00 673996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-31 00:00:00 2023-09-12 00:00:00 673996 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-6 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "128 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 665083\n", + "[]\n", + "2023-11-14 00:00:00 2023-12-14 00:00:00 665083 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-08-17 00:00:00 2023-08-29 00:00:00 665083 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-31 00:00:00 2023-09-12 00:00:00 665083 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_4 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "65 0.728mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 652440\n", + "[]\n", + "2023-11-17 00:00:00 2023-12-22 00:00:00 652440 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-08-17 00:00:00 2023-08-29 00:00:00 652440 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-08-31 00:00:00 2023-09-12 00:00:00 652440 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", + "lot number AIAB_0001_4 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", + "\n", + " Concentration # of vials Location Dilution \\\n", + "65 0.728mg/ml 1.0 -20C NaN \n", + "\n", + " Notes \n", + "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", + "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 675375\n", + "[]\n", + "2024-01-10 00:00:00 2024-02-13 00:00:00 675375 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-10-16 00:00:00 2023-10-27 00:00:00 675375 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-11-01 00:00:00 2023-11-14 00:00:00 675375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-11-15 00:00:00 2023-11-15 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 675374\n", + "[]\n", + "2024-01-10 00:00:00 2024-02-13 00:00:00 675374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-10-16 00:00:00 2023-10-27 00:00:00 675374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-11-01 00:00:00 2023-11-14 00:00:00 675374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-11-15 00:00:00 2023-11-15 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 675058\n", + "[]\n", + "2023-10-16 00:00:00 2023-10-27 00:00:00 675058 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-11-01 00:00:00 2023-11-14 00:00:00 675058 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "file not found for 109_11\n", + "[]\n", + "2024-02-12 00:00:00 2024-03-12 00:00:00 109_11 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-10-30 00:00:00 2023-11-10 00:00:00 109_11 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-11-13 00:00:00 2023-11-22 00:00:00 109_11 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 109_03\n", + "[]\n", + "2024-01-22 00:00:00 2024-02-20 00:00:00 109_03 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-10-30 00:00:00 2023-11-10 00:00:00 109_03 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-11-13 00:00:00 2023-11-22 00:00:00 109_03 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 655146\n", + "[]\n", + "2023-10-30 00:00:00 2023-11-10 00:00:00 655146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-11-13 00:00:00 2023-11-22 00:00:00 655146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Alpaca anti-Rabbit IgG (H+L) AF 488\n", + "lot number 90221043AF1 found in antibody sheet\n", + "info row: Name Target \\\n", + "57 Alpaca anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (recombinant VHH) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# \\\n", + "57 Alexa Fluorâ„¢ 488 Alpaca NaN Thermo Fisher srbAF488-1 \n", + "\n", + " RRID Lot# Amount Concentration # of vials Location \\\n", + "57 AB_2827585 90221043AF1 100uL 0.5g/L 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "57 NaN Nano-secondary \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 655145\n", + "[]\n", + "2024-01-12 00:00:00 2024-02-15 00:00:00 655145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-10-30 00:00:00 2023-11-10 00:00:00 655145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-11-13 00:00:00 2023-11-22 00:00:00 655145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 697837\n", + "[]\n", + "2024-01-12 00:00:00 2024-02-15 00:00:00 697837 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-10-30 00:00:00 2023-11-10 00:00:00 697837 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-11-13 00:00:00 2023-11-22 00:00:00 697837 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 697836\n", + "[]\n", + "2024-02-12 00:00:00 2024-03-12 00:00:00 697836 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-10-30 00:00:00 2023-11-10 00:00:00 697836 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-11-13 00:00:00 2023-11-22 00:00:00 697836 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 686955\n", + "[]\n", + "2024-02-05 00:00:00 2024-03-06 00:00:00 686955 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-21 00:00:00 2023-12-06 00:00:00 686955 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-07 00:00:00 2022-12-18 00:00:00 686955 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 667998\n", + "[]\n", + "2023-11-21 00:00:00 2023-12-06 00:00:00 667998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-07 00:00:00 2022-12-18 00:00:00 667998 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Alpaca anti-Rabbit IgG (H+L) AF 488\n", + "lot number 90221043AF1 found in antibody sheet\n", + "info row: Name Target \\\n", + "57 Alpaca anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (recombinant VHH) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# \\\n", + "57 Alexa Fluorâ„¢ 488 Alpaca NaN Thermo Fisher srbAF488-1 \n", + "\n", + " RRID Lot# Amount Concentration # of vials Location \\\n", + "57 AB_2827585 90221043AF1 100uL 0.5g/L 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "57 NaN Nano-secondary \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 686951\n", + "[]\n", + "2024-01-31 00:00:00 2024-02-26 00:00:00 686951 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-21 00:00:00 2023-12-06 00:00:00 686951 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-07 00:00:00 2022-12-18 00:00:00 686951 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 667996\n", + "[]\n", + "2024-01-31 00:00:00 2024-02-26 00:00:00 667996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-21 00:00:00 2023-12-06 00:00:00 667996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-07 00:00:00 2022-12-18 00:00:00 667996 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 701772\n", + "[]\n", + "2024-02-05 00:00:00 2024-03-06 00:00:00 701772 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-21 00:00:00 2023-12-06 00:00:00 701772 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-07 00:00:00 2022-12-18 00:00:00 701772 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 673163\n", + "[]\n", + "2024-02-05 00:00:00 2024-03-06 00:00:00 673163 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-21 00:00:00 2023-12-06 00:00:00 673163 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-07 00:00:00 2022-12-18 00:00:00 673163 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 659145\n", + "[]\n", + "2024-01-31 00:00:00 2024-02-26 00:00:00 659145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-21 00:00:00 2023-12-06 00:00:00 659145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-07 00:00:00 2022-12-18 00:00:00 659145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 701773\n", + "[]\n", + "2024-02-02 00:00:00 2024-03-05 00:00:00 701773 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-20 00:00:00 2023-12-06 00:00:00 701773 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-06 00:00:00 2023-12-19 00:00:00 701773 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 678794\n", + "[]\n", + "2024-02-02 00:00:00 2024-03-05 00:00:00 678794 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-20 00:00:00 2023-12-06 00:00:00 678794 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-06 00:00:00 2023-12-19 00:00:00 678794 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 673161\n", + "[]\n", + "2024-02-02 00:00:00 2024-03-05 00:00:00 673161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-20 00:00:00 2023-12-06 00:00:00 673161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-06 00:00:00 2023-12-19 00:00:00 673161 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 678112\n", + "[]\n", + "2024-02-02 00:00:00 2024-03-05 00:00:00 678112 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-20 00:00:00 2023-12-06 00:00:00 678112 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-06 00:00:00 2023-12-19 00:00:00 678112 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 667997\n", + "[]\n", + "2024-02-02 00:00:00 2024-03-05 00:00:00 667997 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-20 00:00:00 2023-12-06 00:00:00 667997 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-06 00:00:00 2023-12-19 00:00:00 667997 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 673157\n", + "[]\n", + "2024-02-02 00:00:00 2024-03-05 00:00:00 673157 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-11-20 00:00:00 2023-12-06 00:00:00 673157 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-12-06 00:00:00 2023-12-19 00:00:00 673157 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2541645 found in antibody sheet\n", + "info row: Name Target \\\n", + "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution Notes \n", + "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 708373\n", + "[]\n", + "2024-02-26 00:00:00 NaT 708373 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-08 00:00:00 2023-12-21 00:00:00 708373 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-01-02 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 708370\n", + "[]\n", + "2024-02-26 00:00:00 NaT 708370 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-08 00:00:00 2023-12-21 00:00:00 708370 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-01-02 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 708374\n", + "[]\n", + "2024-02-26 00:00:00 NaT 708374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-08 00:00:00 2023-12-21 00:00:00 708374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-01-02 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 708368\n", + "[]\n", + "2024-02-26 00:00:00 NaT 708368 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-08 00:00:00 2023-12-21 00:00:00 708368 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-01-02 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 708369\n", + "[]\n", + "2024-02-26 00:00:00 NaT 708369 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-08 00:00:00 2023-12-21 00:00:00 708369 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-01-02 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 708375\n", + "[]\n", + "2024-02-26 00:00:00 NaT 708375 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-08 00:00:00 2023-12-21 00:00:00 708375 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-01-02 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 708376\n", + "[]\n", + "2024-02-26 00:00:00 NaT 708376 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-08 00:00:00 2023-12-21 00:00:00 708376 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-01-02 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 705161\n", + "[]\n", + "2024-01-12 00:00:00 2024-02-11 00:00:00 705161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-08 00:00:00 2023-12-21 00:00:00 705161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2023-01-02 00:00:00 2024-01-12 00:00:00 705161 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "file not found for 685221\n", + "[]\n", + "2024-03-01 00:00:00 2024-03-27 00:00:00 685221 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-12 00:00:00 2023-12-21 00:00:00 685221 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-04 00:00:00 2024-01-18 00:00:00 685221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 685222\n", + "[]\n", + "2024-03-11 00:00:00 NaT 685222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-12 00:00:00 2023-12-21 00:00:00 685222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-04 00:00:00 2024-01-18 00:00:00 685222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 684101\n", + "[]\n", + "2024-03-11 00:00:00 NaT 684101 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-12 00:00:00 2023-12-21 00:00:00 684101 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-04 00:00:00 2024-01-18 00:00:00 684101 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 684100\n", + "[]\n", + "2024-03-01 00:00:00 2024-03-27 00:00:00 684100 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-12 00:00:00 2023-12-21 00:00:00 684100 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-04 00:00:00 2024-01-18 00:00:00 684100 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 708365\n", + "[]\n", + "2024-03-01 00:00:00 2024-03-27 00:00:00 708365 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2023-12-12 00:00:00 2023-12-21 00:00:00 708365 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-04 00:00:00 2024-01-18 00:00:00 708365 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709393\n", + "[]\n", + "2024-03-15 00:00:00 NaT 709393 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 709393 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 709393 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709394\n", + "[]\n", + "2024-03-15 00:00:00 NaT 709394 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 709394 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 709394 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709222\n", + "[]\n", + "2024-03-26 00:00:00 NaT 709222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 709222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 709222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709221\n", + "[]\n", + "2024-03-21 00:00:00 NaT 709221 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 709221 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 709221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709220\n", + "[]\n", + "2024-03-26 00:00:00 NaT 709220 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 709220 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 709220 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", + "lot number 2304269 found in antibody sheet\n", + "info row: Name Target Fluorophore \\\n", + "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", + "\n", + " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", + "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", + "\n", + " Concentration # of vials Location Dilution Notes \n", + "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 706434\n", + "[]\n", + "2024-03-26 00:00:00 NaT 706434 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 706434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 706434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 706300\n", + "[]\n", + "2024-03-15 00:00:00 NaT 706300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 706300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 706300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 706301\n", + "[]\n", + "2024-03-21 00:00:00 NaT 706301 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 706301 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 706301 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 703071\n", + "[]\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 703071 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 703071 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 703066\n", + "[]\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 703066 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 703066 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 703070\n", + "[]\n", + "2024-03-21 00:00:00 NaT 703070 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 703070 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 703070 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 703067\n", + "[]\n", + "2024-03-15 00:00:00 NaT 703067 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-05 00:00:00 2024-01-18 00:00:00 703067 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-01-22 00:00:00 2024-02-01 00:00:00 703067 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2330673 found in antibody sheet\n", + "info row: Name Target \\\n", + "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "124 NaN Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", + "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", + "\n", + " Notes \n", + "44 NaN \n", + "124 NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709839\n", + "[]\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 709839 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 709839 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709013\n", + "[]\n", + "2024-04-04 00:00:00 NaT 709013 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 709013 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 709013 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709838\n", + "[]\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 709838 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 709838 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 704523\n", + "[]\n", + "2024-04-04 00:00:00 NaT 704523 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 704523 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 704523 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 713601\n", + "[]\n", + "2024-04-04 00:00:00 NaT 713601 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 713601 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 713601 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 713600\n", + "[]\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 713600 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 713600 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 704521\n", + "[]\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 704521 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 704521 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709203\n", + "[]\n", + "2024-04-04 00:00:00 NaT 709203 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 709203 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 709203 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709016\n", + "[]\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 709016 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 709016 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 704522\n", + "[]\n", + "2024-04-04 00:00:00 NaT 704522 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", + "2024-01-30 00:00:00 2024-02-12 00:00:00 704522 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-02-13 00:00:00 2024-02-22 00:00:00 704522 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number 1037873-7 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials \\\n", + "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", + "\n", + " Location Dilution Notes \n", + "16 4C NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", + "lot number 2668665 found in antibody sheet\n", + "info row: Name Target \\\n", + "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", + "\n", + " Fluorophore Host Species Clone Company Catalog# RRID \\\n", + "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", + "\n", + " Lot# Amount Concentration # of vials Location Dilution \\\n", + "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", + "\n", + " Notes \n", + "46 1 extra aliquot in 4c \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 715347\n", + "[]\n", + "2024-02-27 00:00:00 2024-03-07 00:00:00 715347 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-03-08 00:00:00 2024-03-19 00:00:00 715347 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 715347 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 719652\n", + "[]\n", + "2024-02-27 00:00:00 2024-03-07 00:00:00 719652 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-03-08 00:00:00 2024-03-19 00:00:00 719652 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 719652 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 719654\n", + "[]\n", + "2024-02-27 00:00:00 2024-03-07 00:00:00 719654 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-03-08 00:00:00 2024-03-19 00:00:00 719654 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 719654 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 715345\n", + "[]\n", + "2024-02-27 00:00:00 2024-03-07 00:00:00 715345 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-03-08 00:00:00 2024-03-19 00:00:00 715345 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Goat Anti-tdT\n", + "lot number 0081030221 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", + "\n", + " Dilution Notes \n", + "22 NaN NaN \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 715345 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 717445\n", + "[]\n", + "2024-02-27 00:00:00 2024-03-07 00:00:00 717445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-03-08 00:00:00 2024-03-19 00:00:00 717445 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number GR3431263-1 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "18 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "18 ab290 AB_303396 GR3431263-1 50ul NaN 1.0 4C \n", + "\n", + " Dilution Notes \n", + "18 NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 717445 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 717444\n", + "[]\n", + "2024-02-27 00:00:00 2024-03-07 00:00:00 717444 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-03-08 00:00:00 2024-03-19 00:00:00 717444 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number GR3431263-1 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "18 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "18 ab290 AB_303396 GR3431263-1 50ul NaN 1.0 4C \n", + "\n", + " Dilution Notes \n", + "18 NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 717444 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 712228\n", + "[]\n", + "2024-02-27 00:00:00 2024-03-07 00:00:00 712228 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-03-08 00:00:00 2024-03-19 00:00:00 712228 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number GR3431263-1 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "18 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "18 ab290 AB_303396 GR3431263-1 50ul NaN 1.0 4C \n", + "\n", + " Dilution Notes \n", + "18 NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 712228 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709011\n", + "[]\n", + "2024-02-27 00:00:00 2024-03-07 00:00:00 709011 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-03-08 00:00:00 2024-03-19 00:00:00 709011 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "immuno anti: Rabbit Anti-GFP\n", + "lot number GR3431263-1 found in antibody sheet\n", + "info row: Name Target Fluorophore Host Species Clone Company \\\n", + "18 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", + "\n", + " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", + "18 ab290 AB_303396 GR3431263-1 50ul NaN 1.0 4C \n", + "\n", + " Dilution Notes \n", + "18 NaN Concentration : 5mg/mL \n", + "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", + "immuno anti: nan\n", + "immuno anti: nan\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 709011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", + "file not found for 709014\n", + "[]\n", + "2024-03-13 00:00:00 2024-03-29 00:00:00 709014 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-04-01 00:00:00 NaT 709014 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "file not found for 717443\n", + "[]\n", + "2024-03-13 00:00:00 2024-03-29 00:00:00 717443 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-04-01 00:00:00 NaT 717443 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "file not found for 715346\n", + "[]\n", + "2024-03-13 00:00:00 2024-03-29 00:00:00 715346 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-04-01 00:00:00 NaT 715346 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "file not found for 712226\n", + "[]\n", + "2024-03-13 00:00:00 2024-03-29 00:00:00 712226 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-04-01 00:00:00 NaT 712226 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "file not found for 718162\n", + "[]\n", + "2024-03-13 00:00:00 2024-03-29 00:00:00 718162 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-04-01 00:00:00 NaT 718162 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "file not found for 718168\n", + "[]\n", + "2024-03-13 00:00:00 2024-03-29 00:00:00 718168 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "2024-04-01 00:00:00 NaT 718168 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "file not found for 683791\n", + "[]\n", + "2024-04-03 00:00:00 NaT 683791 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "file not found for 720165\n", + "[]\n", + "2024-04-03 00:00:00 NaT 720165 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "file not found for 717614\n", + "[]\n", + "2024-04-03 00:00:00 NaT 717614 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "file not found for 721056\n", + "[]\n", + "2024-04-03 00:00:00 NaT 721056 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "file not found for 719179\n", + "[]\n", + "2024-04-03 00:00:00 NaT 719179 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "file not found for 721059\n", + "[]\n", + "2024-04-03 00:00:00 NaT 721059 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "file not found for 717984\n", + "[]\n", + "2024-04-03 00:00:00 NaT 717984 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "file not found for 720164\n", + "[]\n", + "2024-04-03 00:00:00 NaT 720164 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "file not found for 683790\n", + "[]\n", + "2024-04-03 00:00:00 NaT 683790 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "file not found for 717612\n", + "[]\n", + "2024-04-03 00:00:00 NaT 717612 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n" + ] + } + ], + "source": [ + "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, Surgery\n", + "\n", + "for row_idx, row in sample_sheet.iterrows():\n", + "\n", + " items = []\n", + "\n", + " new_procedures = []\n", + "\n", + " # general info\n", + " processor = row['Processing Lead']\n", + " sample_id = str(row['Sample'])\n", + " genotype = row['Genotype']\n", + " label = row['Label']\n", + " inj_age = row['Age of Injection']\n", + " tta_virus_dose = row['tTA Virus Dose']\n", + "\n", + "\n", + " if len(sample_id) != 6:\n", + " continue \n", + "\n", + " try:\n", + " with open(f'./original_spec_files/{sample_id}_invalid.json', 'r') as infile:\n", + " data = json.load(infile)\n", + "\n", + " if str(data.get('subject_id', None)) != sample_id:\n", + " print(f\"subject_id mismatch: {data.get('subject_id', None)} != {sample_id}.\")\n", + "\n", + " original_subj_procedures = []\n", + " for item in data.get('subject_procedures', []):\n", + " if 'protocol_id' not in item.keys():\n", + " item['protocol_id'] = \"unknown\"\n", + " \n", + " for procedure in item['procedures']:\n", + " if 'protocol_id' not in procedure.keys():\n", + " procedure['protocol_id'] = \"unknown\"\n", + "\n", + " original_subj_procedures.append(item)\n", + "\n", + " except FileNotFoundError:\n", + " original_subj_procedures = []\n", + "\n", + " spec_maker = SpecMaker(processor, sample_id, original_subj_procedures)\n", + "\n", + " \n", + " gelation_start = row['Gelation: MBS Start']\n", + " gelation_end = row['PBS Wash End']\n", + "\n", + " if not pd.isna(gelation_start):\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=gelation_start, \n", + " end=gelation_end, \n", + " procedure_type=SpecimenProcedureType.GELATION, \n", + " procedure_name=\"Gelation\",\n", + " protocol_id=[\"dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1\"],\n", + " reagent=[],\n", + " )\n", + " )\n", + "\n", + " # delipidation\n", + " dcm_delip_start = row['DCM Delipidation Start']\n", + " dcm_delip_end = row['DCM Delipidation End']\n", + "\n", + " if not pd.isna(dcm_delip_start):\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=dcm_delip_start, \n", + " end=dcm_delip_end, \n", + " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", + " procedure_name=\"DCM Delipidation\",\n", + " protocol_id=[\"dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1\"],\n", + " reagent=[],\n", + " )\n", + " )\n", + "\n", + "\n", + " sbip_delip_start = row['SBiP Delipidation Start']\n", + " sbip_delip_end = row['SBiP Delipidation End']\n", + "\n", + " if not pd.isna(sbip_delip_start):\n", + " new_procedures.append(\n", + " spec_maker.make_spec_procedure(\n", + " start=sbip_delip_start, \n", + " end=sbip_delip_end, \n", + " procedure_type=SpecimenProcedureType.DELIPIDATION, \n", + " procedure_name=\"SBiP Delipidation\",\n", + " protocol_id=[\"dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1\"],\n", + " reagent=[],\n", + " )\n", + " )\n", + "\n", + " immuno_primary_start = row[f'Immuno: Primary Ab Start Date']\n", + "\n", + " antibody_courses = {}\n", + " \n", + " for which in ['Primary', 'Secondary']:\n", + " antibodies = []\n", + " start_date = row[f'Immuno: {which} Ab Start Date']\n", + " if pd.isna(start_date):\n", " continue\n", " for i in range(1, 4):\n", " immuno_antibody = row[f'Immuno: {which} Antibody{i}']\n", - " print(f'immuno anti: {immuno_antibody}')\n", + "\n", " if pd.isna(immuno_antibody):\n", " continue\n", + "\n", " immuno_mass = row[f'Mass of {which} Antibody{i} used per Brain (ug)']\n", " immuno_catalogue = row[f'{which} Antibody{i} Catalog #']\n", " immuno_lot = row[f'{which} Antibody{i} Lot #']\n", " fluorophore = None\n", + "\n", " if which == 'Secondary':\n", " fluorophore = row[f'Fluorophore{i}']\n", "\n", " if not pd.isna(immuno_lot) and immuno_lot in antibody_sheet['Lot#'].tolist():\n", - " print(f'lot number {immuno_lot} found in antibody sheet')\n", + "\n", " info_row = antibody_sheet.loc[antibody_sheet['Lot#'] == immuno_lot]\n", "\n", - " print(f'info row: {info_row}')\n", + " try:\n", + " source = Organization.from_abbreviation(info_row['Company'].values[0])\n", + " except KeyError:\n", + " source = Organization.OTHER\n", "\n", - " source = Organization.from_abbreviation(info_row['Company'].values[0])\n", - " print(f'source: {source}')\n", " rrid = info_row['RRID'].values[0]\n", " if pd.isna(rrid):\n", " rrid = None\n", + " else:\n", + " rrid = PIDName(\n", + " name=info_row['Name'].values[0],\n", + " registry= Registry.RRID,\n", + " registry_identifier=rrid\n", + " )\n", " else:\n", - " immuno_lot = 'Unknown'\n", + " immuno_lot = 'unknown'\n", " source = Organization.OTHER\n", " rrid = None\n", "\n", @@ -1437,7 +5319,7 @@ " \n", " if not pd.isna(fluorophore):\n", " fluorophore = fluorophore.replace('AF', 'Alexa Fluor')\n", - " if pd.isna(fluorophore):\n", + " if pd.isna(fluorophore) or fluorophore == \"n/a\":\n", " fluorophore = None\n", "\n", " if pd.isna(immuno_mass):\n", @@ -1448,7 +5330,7 @@ " name=immuno_antibody,\n", " source=source,\n", " rrid=rrid,\n", - " lot_number=immuno_lot,\n", + " lot_number=str(immuno_lot),\n", " immunolabel_class=which,\n", " fluorophore=fluorophore,\n", " concentration=immuno_mass,\n", @@ -1466,7 +5348,7 @@ " end=start_date, \n", " procedure_type=SpecimenProcedureType.IMMUNOLABELING, \n", " procedure_name=f\"{which} Antibody Immunolabeling\",\n", - " protocol_id=[\"unknown\"],\n", + " protocol_id=[\"dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1\"],\n", " reagent=[],\n", " antibodies=antibodies,\n", " )\n", diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb new file mode 100644 index 00000000..bcf2c3dd --- /dev/null +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -0,0 +1,255 @@ +{ + "cells": [ + { + "cell_type": "code", + "execution_count": 1, + "metadata": {}, + "outputs": [], + "source": [ + "import pandas as pd\n", + "import requests\n", + "import json\n", + "\n", + "from datetime import datetime\n", + "import glob\n", + "from enum import Enum\n", + "from pathlib import Path\n", + "\n", + "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial, \n", + "\n", + "from aind_data_schema.models.organizations import Organization\n", + "\n", + "from aind_data_schema.models.pid_names import PIDName\n", + "\n", + "from aind_data_schema.models.registry import Registry\n", + "\n", + "\n", + "sample_sheet = pd.read_excel(\"./ExM Sample Tracking.xlsx\", sheet_name=\"ExM Sample Tracking\", header=[0], converters={})" + ] + }, + { + "cell_type": "code", + "execution_count": 8, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='576404' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='603033' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609105' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609107' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609281' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648436' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651324' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651895' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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[{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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[{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 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[{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658733' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658734', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 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None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 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'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660625' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 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[{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 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"describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665470' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': 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None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 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"describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674190' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}] specimen_procedures=[] notes=None\n" + ] + } + ], + "source": [ + "files = glob.glob(\"./original_spec_files/*.json\")\n", + "\n", + "for file in files:\n", + " with open(file) as f:\n", + " data = json.load(f)\n", + " print(data)\n", + " original_procedure = Procedures.model_construct(**data)\n", + "\n", + " print(original_procedure)\n", + "\n", + " subj = original_procedure.subject_id\n", + "\n", + " for surgery in original_procedure.subject_procedures:\n", + " if surgery.protocol_id == \"unknown\":\n", + " logging.info(f\"replacing protocol id for subject {subj}\")\n", + " for subj_procedure in surgery.procedures:\n", + " if subj_procedure.procedure_type == \"Retro-orbital injection\":\n", + " subj_procedure.protocol_id = \"dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1\"\n", + "\n", + "\n", + " # titer = dose / volume, with volume in ml (gc/ml) (translate to ml)\n", + "\n", + " # perhaps put vehicle in notes field of surgery?\n", + "\n", + " # for value in [1,2,3]:\n" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] + } + ], + "metadata": { + "kernelspec": { + "display_name": "ainds", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.11.5" + } + }, + "nbformat": 4, + "nbformat_minor": 2 +} From 2be4bb7e4b93c6ad87226fe07e67d09b6802e397 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Tue, 23 Apr 2024 18:14:55 -0400 Subject: [PATCH 28/43] Update ingest_exaspim_materials.ipynb --- .../ingest_exaspim_materials.ipynb | 239 +++++++++++++++++- 1 file changed, 229 insertions(+), 10 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb index bcf2c3dd..2cee3811 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -4,7 +4,16 @@ "cell_type": "code", "execution_count": 1, "metadata": {}, - "outputs": [], + "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\openpyxl\\styles\\stylesheet.py:226: UserWarning: Workbook contains no default style, apply openpyxl's default\n", + " warn(\"Workbook contains no default style, apply openpyxl's default\")\n" + ] + } + ], "source": [ "import pandas as pd\n", "import requests\n", @@ -15,7 +24,7 @@ "from enum import Enum\n", "from pathlib import Path\n", "\n", - "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial, \n", + "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial\n", "\n", "from aind_data_schema.models.organizations import Organization\n", "\n", @@ -23,13 +32,69 @@ "\n", "from aind_data_schema.models.registry import Registry\n", "\n", + "import logging\n", + "\n", + "\n", + "materials_sheet = pd.read_excel(\"./Mouse Tracker - RO injections.xlsx\", sheet_name=\"Mouse Tracker - RO injections\", header=[0], converters={})" + ] + }, + { + "cell_type": "code", + "execution_count": 2, + "metadata": {}, + "outputs": [], + "source": [ + "log_file_name = \"./logging/log_\" + datetime.now().strftime(\"%Y%m%d_%H%M%S\") + \".log\"\n", + "logger = logging.getLogger()\n", + "logger.setLevel(logging.DEBUG)\n", + "# create file handler which logs even debug messages\n", + "fh = logging.FileHandler(log_file_name, \"w\", \"utf-8\")\n", + "fh.setLevel(logging.DEBUG)\n", + "\n", + "# create formatter and add it to the handlers\n", + "formatter = logging.Formatter(\"%(asctime)s - %(name)s - %(levelname)s - %(message)s\")\n", + "fh.setFormatter(formatter)\n", + "# add the handlers to logger\n", + "logger.addHandler(fh)" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "def get_inj_materials(subj_id):\n", + " materials = []\n", "\n", - "sample_sheet = pd.read_excel(\"./ExM Sample Tracking.xlsx\", sheet_name=\"ExM Sample Tracking\", header=[0], converters={})" + " subj_row = materials_sheet.loc[materials_sheet[\"Subject ID\"] == subj_id]\n", + " for val in [1,2,3]:\n", + " virus = subj_row[f\"Virus{val}\"].values[0]\n", + " print(virus)\n", + " if pd.isna(virus):\n", + " continue\n", + "\n", + " virus_id = subj_row[f\"Virus{val} ID\" ].values[0]\n", + "\n", + " titer = subj_row[f\"Virus{val} Titer (GC/mL)\"].values[0]\n", + "\n", + " if pd.isna(titer):\n", + " dose = float(subj_row[f\"Virus{val} Dose (GC/mouse)\"].values[0])\n", + " volume = float(subj_row[f\"Virus{val} Volume Injected\"].values[0].split(\"u\")[0])\n", + "\n", + " titer = dose/(volume*.001)\n", + "\n", + "\n", + " new_material = ViralMaterial(\n", + " name=virus,\n", + " titer=titer,\n", + " \n", + " )\n" ] }, { "cell_type": "code", - "execution_count": 8, + "execution_count": 4, "metadata": {}, "outputs": [ { @@ -38,160 +103,298 @@ "text": [ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='576404' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='603033' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609105' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609107' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609281' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}\n", "{'describedBy': 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='613814' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='614978' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 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'2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}\n", "{'describedBy': 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='615296' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='618583' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 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'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}\n", "{'describedBy': 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='620631' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648077' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648079' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648434' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648435' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648436' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648695' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648696' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 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None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 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'2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}\n", "{'describedBy': 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'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 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'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 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'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}\n", "{'describedBy': 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'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 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'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 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'2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650008' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 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'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 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'2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650011' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650819', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650819' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651305' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651324' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651327' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651895' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651897' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652441' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652445' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652779' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652781' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653153' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653158' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653159' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653431' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653432' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653980' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653981' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='654306' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='654308' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='654727' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='657676' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658733', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658733' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658734', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658734' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658735' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='659146' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660625' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660627' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660630' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660949' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660950' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='661300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='664761' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665081' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665082' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665470' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667857' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='668294' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669973' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669977' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674184' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674185' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674190' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}] specimen_procedures=[] notes=None\n" + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}\n" ] } ], @@ -209,11 +412,27 @@ " subj = original_procedure.subject_id\n", "\n", " for surgery in original_procedure.subject_procedures:\n", - " if surgery.protocol_id == \"unknown\":\n", - " logging.info(f\"replacing protocol id for subject {subj}\")\n", - " for subj_procedure in surgery.procedures:\n", - " if subj_procedure.procedure_type == \"Retro-orbital injection\":\n", - " subj_procedure.protocol_id = \"dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1\"\n", + " print(surgery)\n", + " if \"protocol_id\" not in surgery.keys():\n", + " surgery[\"protocol_id\"] = \"dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1\"\n", + " logging.info(f\"adding surgery protocol id for subject {subj}\")\n", + " elif surgery[\"protocol_id\"] == \"unknown\":\n", + " logging.info(f\"replacing surgery protocol id for subject {subj}\")\n", + " surgery[\"protocol_id\"] = \"dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1\"\n", + " for subj_procedure in surgery[\"procedures\"]:\n", + " if subj_procedure[\"procedure_type\"] == \"Perfusion\":\n", + " if \"protocol_id\" not in subj_procedure.keys():\n", + " logging.info(f\"adding perfusion protocol id for subject {subj}\")\n", + " subj_procedure[\"protocol_id\"] = \"dx.doi.org/10.17504/protocols.io.bg5vjy66\"\n", + " \n", + " elif subj_procedure[\"protocol_id\"] == \"unknown\":\n", + " logging.info(f\"replacing perfusion protocol id for subject {subj}\")\n", + " subj_procedure[\"protocol_id\"] = \"dx.doi.org/10.17504/protocols.io.bg5vjy66\"\n", + "\n", + " if subj_procedure[\"procedure_type\"] == \"Retro-orbital injection\":\n", + " \n", + " \n", + "\n", "\n", "\n", " # titer = dose / volume, with volume in ml (gc/ml) (translate to ml)\n", From 96367cd128e10ae891b81db90ca0c6c64812bfc3 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Wed, 24 Apr 2024 18:51:11 -0400 Subject: [PATCH 29/43] materials ingested --- .gitignore | 1 + scripts/Exaspim_ingest/ingest_exaspim.ipynb | 5290 +++-------------- .../ingest_exaspim_materials.ipynb | 529 +- 3 files changed, 1379 insertions(+), 4441 deletions(-) diff --git a/.gitignore b/.gitignore index 60178112..fd253c7d 100644 --- a/.gitignore +++ b/.gitignore @@ -30,6 +30,7 @@ scripts/MRI_ingest scripts/Exaspim_ingest/original_spec_files scripts/Exaspim_ingest/ExM Sample Tracking.xlsx scripts/Exaspim_ingest/output +scripts/Exaspim_ingest/original_plus_materials # PyInstaller # Usually these files are written by a python script from a template diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index f8387d58..5b8e73f8 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -257,4922 +257,1351 @@ }, { "cell_type": "code", - "execution_count": 8, + "execution_count": 10, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2021-11-10 00:00:00 2021-12-03 00:00:00 576404 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2021-10-01 00:00:00 2021-10-11 00:00:00 576404 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2021-10-25 00:00:00 2021-11-03 00:00:00 576404 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-05-05 00:00:00 2022-06-02 00:00:00 609105 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-01-21 00:00:00 2022-02-02 00:00:00 609105 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-02-03 00:00:00 2022-02-15 00:00:00 609105 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 609107 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 609107 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 609107 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 609281 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 609281 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 609281 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 614978 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 614978 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 614978 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 614980 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 614980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 614980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': 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None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 615296 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 615296 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 615296 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-06-16 00:00:00 2022-07-15 00:00:00 603033 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2021-12-26 00:00:00 2022-01-05 00:00:00 603033 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-01-05 00:00:00 2022-01-14 00:00:00 603033 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-09-23 00:00:00 2022-10-26 00:00:00 618584 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-10 00:00:00 2022-06-23 00:00:00 618584 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-06-27 00:00:00 2022-07-14 00:00:00 618584 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-08 00:00:00 2022-12-07 00:00:00 620631 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-21 00:00:00 2022-06-30 00:00:00 620631 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-07-06 00:00:00 2022-07-12 00:00:00 620631 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-09 00:00:00 2022-12-01 00:00:00 620629 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-21 00:00:00 2022-06-30 00:00:00 620629 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-07-06 00:00:00 2022-07-12 00:00:00 620629 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-01 00:00:00 2023-02-27 00:00:00 648860 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648860 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648860 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_1 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "62 0.257mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-06 00:00:00 2023-01-06 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648861 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648861 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-07 00:00:00 2023-12-07 00:00:00 648861 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 648861 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648858 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648858 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-07 00:00:00 2023-12-07 00:00:00 648858 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 648858 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648862 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648862 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-07 00:00:00 2023-12-07 00:00:00 648862 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 648862 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-09 00:00:00 2023-03-08 00:00:00 648077 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648077 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648077 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-06 00:00:00 2023-01-06 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-06 00:00:00 648079 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648079 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648079 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 648079 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 648079 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-06 00:00:00 648698 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648698 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648698 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT ATTO 565\n", - "lot number AIAB_0003_1 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone \\\n", - "5 Goat Anti-tdT ATTO 565 Anti-tdTomato ATTO 565 Goat NaN \n", - "\n", - " Company Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "5 AIND AIAB_0003 NaN AIAB_0003_1 NaN .252 ug/ul 1.0 \n", - "\n", - " Location Dilution Notes \n", - "5 -20C NaN DOL = 5.2 Conjugated at AIND by KC / Tube is ... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 648698 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 648698 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648699 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648699 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648700 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648700 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-07 00:00:00 2023-12-07 00:00:00 648700 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 648700 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-28 00:00:00 2023-06-03 00:00:00 648696 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648696 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648696 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-21 00:00:00 2023-03-21 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_2 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "63 0.234mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-05 00:00:00 2023-04-05 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-03-21 00:00:00 2023-03-21 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-05 00:00:00 2023-04-05 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648695 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648695 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-28 00:00:00 2023-06-03 00:00:00 648697 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648697 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648697 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-21 00:00:00 2023-03-21 00:00:00 648697 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_2 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "63 0.234mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-05 00:00:00 2023-04-05 00:00:00 648697 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-03-21 00:00:00 2023-03-21 00:00:00 648697 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-05 00:00:00 2023-04-05 00:00:00 648697 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-23 00:00:00 2023-02-20 00:00:00 651324 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 651324 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 651324 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 651324 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-06 00:00:00 2023-01-06 00:00:00 651324 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 651324 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 651324 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-01 00:00:00 2023-02-27 00:00:00 651327 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 651327 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 651327 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-06 00:00:00 2023-01-06 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-05 00:00:00 650008 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650008 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650008 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT ATTO 565\n", - "lot number AIAB_0003_1 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone \\\n", - "5 Goat Anti-tdT ATTO 565 Anti-tdTomato ATTO 565 Goat NaN \n", - "\n", - " Company Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "5 AIND AIAB_0003 NaN AIAB_0003_1 NaN .252 ug/ul 1.0 \n", - "\n", - " Location Dilution Notes \n", - "5 -20C NaN DOL = 5.2 Conjugated at AIND by KC / Tube is ... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 650008 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 650008 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-04 00:00:00 650009 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT ATTO 565\n", - "lot number AIAB_0003_1 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone \\\n", - "5 Goat Anti-tdT ATTO 565 Anti-tdTomato ATTO 565 Goat NaN \n", - "\n", - " Company Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "5 AIND AIAB_0003 NaN AIAB_0003_1 NaN .252 ug/ul 1.0 \n", - "\n", - " Location Dilution Notes \n", - "5 -20C NaN DOL = 5.2 Conjugated at AIND by KC / Tube is ... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 650009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 650009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-09 00:00:00 2023-03-08 00:00:00 650010 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650010 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650010 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_1 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "62 0.257mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-06 00:00:00 2023-01-06 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-23 00:00:00 2023-02-20 00:00:00 650011 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650011 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650011 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2022-12-19 00:00:00 2022-12-19 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_1 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "62 0.257mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-06 00:00:00 2023-01-06 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2022-12-19 00:00:00 2022-12-19 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-01-06 00:00:00 2023-01-06 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 652779 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 652779 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-02-13 00:00:00 2023-02-13 00:00:00 652779 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 652779 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 652781 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 652781 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-02-13 00:00:00 2023-02-13 00:00:00 652781 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 652781 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-22 00:00:00 648434 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-02-13 00:00:00 2023-02-13 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_2 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "63 0.234mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-30 00:00:00 2023-03-30 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-03-30 00:00:00 2023-03-30 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-17 00:00:00 648435 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648435 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648435 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-02-13 00:00:00 2023-02-13 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_2 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "63 0.234mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-30 00:00:00 2023-03-30 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-03-30 00:00:00 2023-03-30 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648436 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648436 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-02-13 00:00:00 2023-02-13 00:00:00 648436 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 648436 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 651305 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 651305 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 651305 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-02-13 00:00:00 2023-02-13 00:00:00 651305 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_1 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "62 0.257mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-25 00:00:00 2023-03-25 00:00:00 651305 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-02-13 00:00:00 2023-02-13 00:00:00 651305 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 651305 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653432 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653432 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rat anti-mTFP\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: Goat Anti-tDT\n", - "[Antibody(name='Rat anti-mTFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-30 00:00:00 2023-01-30 00:00:00 653432 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rat anti-mTFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Goat anti-Rat IgG (H+L) AF 647\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "[Antibody(name='Goat anti-Rat IgG (H+L) AF 647', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 647', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-02-15 00:00:00 2023-02-15 00:00:00 653432 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat anti-Rat IgG (H+L) AF 647', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 647', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rat anti-mTFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-01-30 00:00:00 2023-01-30 00:00:00 653432 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rat anti-mTFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Goat anti-Rat IgG (H+L) AF 647', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 647', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-02-15 00:00:00 2023-02-15 00:00:00 653432 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat anti-Rat IgG (H+L) AF 647', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 647', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-03-13 00:00:00 2023-04-17 00:00:00 653430 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653430 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653430 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-30 00:00:00 2023-01-30 00:00:00 653430 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-02-15 00:00:00 2023-02-15 00:00:00 653430 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-01-30 00:00:00 2023-01-30 00:00:00 653430 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-02-15 00:00:00 2023-02-15 00:00:00 653430 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-03-13 00:00:00 2023-04-17 00:00:00 653431 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653431 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653431 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-30 00:00:00 2023-01-30 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-02-15 00:00:00 2023-02-15 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-01-30 00:00:00 2023-01-30 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-02-15 00:00:00 2023-02-15 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653980 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-07 00:00:00 2023-03-07 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-25 00:00:00 2023-03-25 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 654727 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 654727 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-07 00:00:00 2023-03-07 00:00:00 654727 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 654727 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653981 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653981 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653981 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-07 00:00:00 2023-03-07 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-25 00:00:00 2023-03-25 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653159 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653159 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653159 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-07 00:00:00 2023-03-07 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_1 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "62 0.257mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-25 00:00:00 2023-03-25 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-17 00:00:00 653158 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653158 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653158 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-07 00:00:00 2023-03-07 00:00:00 653158 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_2 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "63 0.234mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-30 00:00:00 2023-03-30 00:00:00 653158 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658734', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 653158 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-03-30 00:00:00 2023-03-30 00:00:00 653158 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658734', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 658734 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 658734 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 658734 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-07 00:00:00 2023-03-07 00:00:00 658734 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-25 00:00:00 2023-03-25 00:00:00 658734 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 658734 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 658734 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 658735 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 658735 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 658735 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-07 00:00:00 2023-03-07 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-03-25 00:00:00 2023-03-25 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-03-07 00:00:00 2023-03-07 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-03-25 00:00:00 2023-03-25 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-26 00:00:00 2023-02-16 00:00:00 613814 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-05 00:00:00 2022-12-14 00:00:00 613814 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-15 00:00:00 2022-12-23 00:00:00 613814 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_1 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "62 0.257mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-21 00:00:00 2023-01-21 00:00:00 613814 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-01-21 00:00:00 2023-01-21 00:00:00 613814 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-26 00:00:00 2023-02-16 00:00:00 618583 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-05 00:00:00 2022-12-14 00:00:00 618583 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-15 00:00:00 2022-12-23 00:00:00 618583 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_1 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "62 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "62 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_1 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "62 0.257mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "62 DOL = 3.2 Batch 1, Date: 12/18/22 NDO 3/... \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-01-21 00:00:00 2023-01-21 00:00:00 618583 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-01-21 00:00:00 2023-01-21 00:00:00 618583 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 659146 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 659146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 659146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-25 00:00:00 2023-04-25 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-25 00:00:00 2023-04-25 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 653153 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 653153 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 653153 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 653153 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_2 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "63 0.234mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-19 00:00:00 2023-04-19 00:00:00 653153 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 653153 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-19 00:00:00 2023-04-19 00:00:00 653153 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-11 00:00:00 2023-08-09 00:00:00 660629 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660629 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660629 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 660629 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-13 00:00:00 2023-06-13 00:00:00 660629 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 660629 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 660629 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-11 00:00:00 2023-08-09 00:00:00 660630 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660630 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660630 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-13 00:00:00 2023-06-13 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 657676 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 657676 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 657676 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-25 00:00:00 2023-04-25 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-25 00:00:00 2023-04-25 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 660950 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660950 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660950 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-25 00:00:00 2023-04-25 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-25 00:00:00 2023-04-25 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 651895 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651895 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651895 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-25 00:00:00 2023-04-25 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-25 00:00:00 2023-04-25 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654306 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654306 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654306 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_2 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "63 0.234mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-19 00:00:00 2023-04-19 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-19 00:00:00 2023-04-19 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 661300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 661300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 661300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-13 00:00:00 2023-06-13 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 660949 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660949 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660949 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-13 00:00:00 2023-06-13 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 651897 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651897 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651897 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-13 00:00:00 2023-06-13 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-06-13 00:00:00 2023-06-13 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654308 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654308 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654308 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-02 00:00:00 2023-04-02 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_2 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "63 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "63 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_2 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "63 0.234mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "63 DOL = 3.3 Batch 2, Date: 02/01/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-19 00:00:00 2023-04-19 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-04-02 00:00:00 2023-04-02 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-19 00:00:00 2023-04-19 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665470 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665470 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-27 00:00:00 2023-04-27 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 664761 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 664761 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-27 00:00:00 2023-04-27 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 665465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 665465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665082 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665082 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 665082 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 665082 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665081 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665081 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-27 00:00:00 2023-04-27 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 652441 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 652441 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-27 00:00:00 2023-04-27 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 652445 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 652445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Goat Anti-tDT\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 652445 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 652445 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 660625 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 660625 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-04-27 00:00:00 2023-04-27 00:00:00 660625 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 660625 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-04-27 00:00:00 2023-04-27 00:00:00 660625 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 660625 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 660627 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 660627 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 660627 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 516429\n", - "[]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 660627 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 516429 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 516429 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-05-31 00:00:00 2023-05-31 00:00:00 516429 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-05-31 00:00:00 2023-05-31 00:00:00 516429 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 386086956521739, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 386086956521739, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674184 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674184 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674184 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 386086956521739, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 386086956521739, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674190 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674190 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674190 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674185 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674185 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674185 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674191 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674191 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674191 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 674191 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 674191 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 674191 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 674191 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 668294 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 668294 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 668294 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 667857 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 667857 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 667857 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669973 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669973 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669973 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'unknown'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669977 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669977 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669977 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 674743\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-12-11 00:00:00 NaT 674743 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 674743 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 674743 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-11-20 00:00:00 2023-11-20 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 675061\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-11-20 00:00:00 2023-11-20 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 675061 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 675061 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-11-20 00:00:00 2023-11-20 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 667354\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-11-20 00:00:00 2023-11-20 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 667354 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 667354 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 667354 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 678116\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 678116 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 678116 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 678116 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 661293\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 661293 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 661293 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 661293 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n" - ] - }, - { - "name": "stdout", - "output_type": "stream", - "text": [ - "file not found for 663412\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-10 00:00:00 2023-12-14 00:00:00 663412 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 663412 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 663412 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 675057\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-10 00:00:00 2023-12-14 00:00:00 675057 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 675057 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 675057 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 664762\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 664762 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 664762 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 664762 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 667352\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 667352 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 667352 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 667352 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 670944\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 670944 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 670944 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 670944 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 670471\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-06 00:00:00 2023-11-08 00:00:00 670471 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670471 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670471 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 670339\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 670339 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670339 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670339 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Chicken Anti-GFP\n", - "lot number GR361051-16 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "13 Chicken Anti-GFP Anti-GFP NaN Chicken NaN Abcam \n", - "123 NaN Anti-GFP NaN Chicken NaN Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration \\\n", - "13 ab13970 AB_300798 GR361051-16 100 uL 10 mg/mL \n", - "123 ab13970 NaN GR361051-16 100 uL (10 mg/mL) NaN \n", - "\n", - " # of vials Location Dilution \\\n", - "13 1.0 4C Dilute 1:5000 \n", - "123 NaN NaN NaN \n", - "\n", - " Notes \n", - "13 1:5000 dilution works well for me (NDO) \n", - "123 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Chicken IgY (H+L) AF 488\n", - "lot number 165794 found in antibody sheet\n", - "info row: Name Target \\\n", - "53 Donkey anti-Chicken IgY (H+L) AF 488 Anti-Chicken IgY (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# \\\n", - "53 Alexa Fluorâ„¢ 488 Donkey NaN Jackson Immuno 703-545-155 \n", - "\n", - " RRID Lot# Amount Concentration # of vials Location Dilution \\\n", - "53 AB_2340375 165794 500 uL 1.5 mg/mL 1.0 -20 1:500 \n", - "\n", - " Notes \n", - "53 1:500 works well for me (NDO); 20ul aliquots d... \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 670344\n", - "[]\n", + "[Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 670344 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670344 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670344 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Chicken Anti-GFP\n", - "lot number GR361051-16 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "13 Chicken Anti-GFP Anti-GFP NaN Chicken NaN Abcam \n", - "123 NaN Anti-GFP NaN Chicken NaN Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration \\\n", - "13 ab13970 AB_300798 GR361051-16 100 uL 10 mg/mL \n", - "123 ab13970 NaN GR361051-16 100 uL (10 mg/mL) NaN \n", - "\n", - " # of vials Location Dilution \\\n", - "13 1.0 4C Dilute 1:5000 \n", - "123 NaN NaN NaN \n", - "\n", - " Notes \n", - "13 1:5000 dilution works well for me (NDO) \n", - "123 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Chicken IgY (H+L) AF 488\n", - "lot number 165794 found in antibody sheet\n", - "info row: Name Target \\\n", - "53 Donkey anti-Chicken IgY (H+L) AF 488 Anti-Chicken IgY (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# \\\n", - "53 Alexa Fluorâ„¢ 488 Donkey NaN Jackson Immuno 703-545-155 \n", - "\n", - " RRID Lot# Amount Concentration # of vials Location Dilution \\\n", - "53 AB_2340375 165794 500 uL 1.5 mg/mL 1.0 -20 1:500 \n", - "\n", - " Notes \n", - "53 1:500 works well for me (NDO); 20ul aliquots d... \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 681465\n", - "[]\n", + "[Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 681465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 681465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 681465 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 681469\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 681469 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 681469 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 681469 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 676009\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 676009 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 676009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 676009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 676007\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 676007 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 676007 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 676007 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 671477\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 671477 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 671477 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 671477 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645.0 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 670808\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 670808 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670808 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670808 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645.0 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 670809\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 670809 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670809 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670809 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645.0 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 674741\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 674741 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 674741 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 674741 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 659142\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 659142 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 659142 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 659142 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: #NO MATCH\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 663410\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 663410 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 663410 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 663410 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 673998\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 673998 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 673998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 673998 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 655147\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 655147 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 655147 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 655147 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 673996\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 673996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 673996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 673996 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-6 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "128 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "128 AB290 AB_303395 1037873-6 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "128 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 665083\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 665083 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 665083 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 665083 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 652440\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 652440 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 652440 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 652440 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Rabbit anti-Goat IgG (H+L) ATTO 565\n", - "lot number AIAB_0001_4 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "65 Rabbit anti-Goat IgG (H+L) ATTO 565 Anti-Goat IgG (H+L) ATTO 565 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "65 Rabbit NaN AIND AIAB_0001 NaN AIAB_0001_4 NaN \n", - "\n", - " Concentration # of vials Location Dilution \\\n", - "65 0.728mg/ml 1.0 -20C NaN \n", - "\n", - " Notes \n", - "65 DOL = 2.3 Batch 4, Date: 05/12/23 \n", - "source: name='Allen Institute for Neural Dynamics' abbreviation='AIND' registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR') registry_identifier='04szwah67'\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 675375\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-10 00:00:00 2024-02-13 00:00:00 675375 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675375 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-11-15 00:00:00 2023-11-15 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-07 00:00:00 2023-12-07 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 675374\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-11-15 00:00:00 2023-11-15 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-10 00:00:00 2024-02-13 00:00:00 675374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-11-15 00:00:00 2023-11-15 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-07 00:00:00 2023-12-07 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 675058\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-11-15 00:00:00 2023-11-15 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675058 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675058 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "file not found for 109_11\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-12 00:00:00 2024-03-12 00:00:00 109_11 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 109_11 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 109_11 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 109_03\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-22 00:00:00 2024-02-20 00:00:00 109_03 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 109_03 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 109_03 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 655146\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 655146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "2023-11-13 00:00:00 2023-11-22 00:00:00 655146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Alpaca anti-Rabbit IgG (H+L) AF 488\n", - "lot number 90221043AF1 found in antibody sheet\n", - "info row: Name Target \\\n", - "57 Alpaca anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (recombinant VHH) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# \\\n", - "57 Alexa Fluorâ„¢ 488 Alpaca NaN Thermo Fisher srbAF488-1 \n", - "\n", - " RRID Lot# Amount Concentration # of vials Location \\\n", - "57 AB_2827585 90221043AF1 100uL 0.5g/L 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "57 NaN Nano-secondary \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 655145\n", - "[]\n", + "2023-11-13 00:00:00 2023-11-22 00:00:00 655146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-12 00:00:00 2024-02-15 00:00:00 655145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 655145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 655145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 697837\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-12 00:00:00 2024-02-15 00:00:00 697837 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 697837 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 697837 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 697836\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-12 00:00:00 2024-03-12 00:00:00 697836 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 697836 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 697836 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 686955\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 686955 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 686955 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 686955 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 667998\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 667998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 667998 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Alpaca anti-Rabbit IgG (H+L) AF 488\n", - "lot number 90221043AF1 found in antibody sheet\n", - "info row: Name Target \\\n", - "57 Alpaca anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (recombinant VHH) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# \\\n", - "57 Alexa Fluorâ„¢ 488 Alpaca NaN Thermo Fisher srbAF488-1 \n", - "\n", - " RRID Lot# Amount Concentration # of vials Location \\\n", - "57 AB_2827585 90221043AF1 100uL 0.5g/L 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "57 NaN Nano-secondary \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 686951\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 686951 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 686951 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 686951 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 667996\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 667996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 667996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 667996 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 701772\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 701772 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 701772 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 701772 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 673163\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 673163 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 673163 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 673163 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 659145\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 659145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 659145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 659145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 701773\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 701773 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 701773 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 701773 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 678794\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 678794 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 678794 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 678794 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 673161\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 673161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 673161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 673161 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 678112\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 678112 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 678112 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 678112 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 667997\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 667997 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 667997 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 667997 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 673157\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 673157 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 673157 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 673157 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2541645 found in antibody sheet\n", - "info row: Name Target \\\n", - "45 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "45 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution Notes \n", - "45 2541645 500 uL 2 mg/mL 2.0 4C NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 708373\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708373 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708373 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 708370\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708370 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708370 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 708374\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 708368\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708368 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708368 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 708369\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708369 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708369 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 708375\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708375 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708375 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 708376\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708376 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708376 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 705161\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-12 00:00:00 2024-02-11 00:00:00 705161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 705161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 705161 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "file not found for 685221\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 685221 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 685221 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 685221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-25 00:00:00 2024-01-25 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 685222\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-11 00:00:00 NaT 685222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 685222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 685222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-25 00:00:00 2024-01-25 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 684101\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-11 00:00:00 NaT 684101 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 684101 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 684101 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-25 00:00:00 2024-01-25 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 684100\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 684100 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 684100 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 684100 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-25 00:00:00 2024-01-25 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 708365\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 708365 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 708365 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 708365 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-01-25 00:00:00 2024-01-25 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709393\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-15 00:00:00 NaT 709393 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709393 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709393 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709394\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-15 00:00:00 NaT 709394 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709394 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709394 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709222\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-26 00:00:00 NaT 709222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709221\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-21 00:00:00 NaT 709221 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709221 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709220\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-26 00:00:00 NaT 709220 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709220 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709220 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Goat IgG (H+L) AF 568\n", - "lot number 2304269 found in antibody sheet\n", - "info row: Name Target Fluorophore \\\n", - "72 Donkey anti-Goat IgG (H+L) AF 568 Anti-Goat IgG (H+L) Alexa Fluorâ„¢ 568 \n", - "\n", - " Host Species Clone Company Catalog# RRID Lot# Amount \\\n", - "72 Donkey NaN Invitrogen A-11057 AB_2534104 2304269 500 uL \n", - "\n", - " Concentration # of vials Location Dilution Notes \n", - "72 2 mg/mL 1.0 4C NaN For ExASPIM pipeline \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 706434\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-26 00:00:00 NaT 706434 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 706300\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-15 00:00:00 NaT 706300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 706301\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-21 00:00:00 NaT 706301 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706301 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706301 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 703071\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703071 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703071 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 703066\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703066 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703066 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 703070\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-21 00:00:00 NaT 703070 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703070 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703070 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 703067\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-15 00:00:00 NaT 703067 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703067 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703067 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2330673 found in antibody sheet\n", - "info row: Name Target \\\n", - "44 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "124 NaN Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "44 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "124 NaN Donkey NaN Invitrogen A-21206 NaN \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "44 2330673 500 uL 2 mg/mL 1.0 4C NaN \n", - "124 2330673 500 uL (2 mg/mL) NaN NaN NaN NaN \n", - "\n", - " Notes \n", - "44 NaN \n", - "124 NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709839\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709839 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709839 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709013\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 709013 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709013 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709013 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709838\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709838 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709838 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 704523\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 704523 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704523 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704523 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 713601\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 713601 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 713601 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 713601 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 713600\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 713600 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 713600 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 704521\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704521 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704521 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709203\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 709203 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709203 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709203 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709016\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709016 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709016 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('40.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 704522\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 704522 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704522 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704522 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number 1037873-7 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "16 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials \\\n", - "16 AB290 AB_303395 1037873-7 50ul (0mg/ml) NaN 1.0 \n", - "\n", - " Location Dilution Notes \n", - "16 4C NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "immuno anti: Donkey anti-Rabbit IgG (H+L) AF 488\n", - "lot number 2668665 found in antibody sheet\n", - "info row: Name Target \\\n", - "46 Donkey anti-Rabbit IgG (H+L) AF 488 Anti-Rabbit IgG (H+L) \n", - "\n", - " Fluorophore Host Species Clone Company Catalog# RRID \\\n", - "46 Alexa Fluorâ„¢ 488 Donkey NaN Invitrogen A-21206 AB_2535792 \n", - "\n", - " Lot# Amount Concentration # of vials Location Dilution \\\n", - "46 2668665 500 uL 2 mg/mL 1.0 4C NaN \n", - "\n", - " Notes \n", - "46 1 extra aliquot in 4c \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', concentration=Decimal('20.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 715347\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 715347 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 715347 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 715347 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 719652\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 715347 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 719652 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 719652 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 719652 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 719654\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 719652 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 719654 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 719654 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 719654 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 715345\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 719654 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 715345 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 715345 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Goat Anti-tdT\n", - "lot number 0081030221 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "22 Goat Anti-tdT Anti-tdT NaN Goat NaN Sicgen \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "22 AB8181-200 NaN 0081030221 NaN 3mg/ml 2.0 -20C \n", - "\n", - " Dilution Notes \n", - "22 NaN NaN \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 715345 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 717445\n", - "[]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 715345 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 717445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 717445 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number GR3431263-1 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "18 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "18 ab290 AB_303396 GR3431263-1 50ul NaN 1.0 4C \n", - "\n", - " Dilution Notes \n", - "18 NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 717445 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 717444\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 717445 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 717444 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 717444 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number GR3431263-1 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "18 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "18 ab290 AB_303396 GR3431263-1 50ul NaN 1.0 4C \n", - "\n", - " Dilution Notes \n", - "18 NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 717444 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 712228\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 717444 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 712228 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 712228 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number GR3431263-1 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "18 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "18 ab290 AB_303396 GR3431263-1 50ul NaN 1.0 4C \n", - "\n", - " Dilution Notes \n", - "18 NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 712228 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709011\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 712228 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 709011 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 709011 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "immuno anti: Rabbit Anti-GFP\n", - "lot number GR3431263-1 found in antibody sheet\n", - "info row: Name Target Fluorophore Host Species Clone Company \\\n", - "18 Rabbit Anti-GFP Anti-GFP NaN Rabbit Polyclonal Abcam \n", - "\n", - " Catalog# RRID Lot# Amount Concentration # of vials Location \\\n", - "18 ab290 AB_303396 GR3431263-1 50ul NaN 1.0 4C \n", - "\n", - " Dilution Notes \n", - "18 NaN Concentration : 5mg/mL \n", - "source: name='Other' abbreviation=None registry=None registry_identifier=None\n", - "immuno anti: nan\n", - "immuno anti: nan\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 709011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, concentration=Decimal('10.0'), concentration_unit='ug/ml', notes=None)]\n", - "file not found for 709014\n", - "[]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 709011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 709014 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 709014 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "file not found for 717443\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 717443 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 717443 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "file not found for 715346\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 715346 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 715346 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "file not found for 712226\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 712226 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 712226 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "file not found for 718162\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 718162 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 718162 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "file not found for 718168\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 718168 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 718168 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "file not found for 683791\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 683791 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "file not found for 720165\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 720165 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "file not found for 717614\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 717614 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "file not found for 721056\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 721056 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "file not found for 719179\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 719179 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "file not found for 721059\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 721059 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "file not found for 717984\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 717984 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "file not found for 720164\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 720164 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "file not found for 683790\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 683790 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "file not found for 717612\n", - "[]\n", + "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 717612 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n" ] } @@ -5199,9 +1628,11 @@ " continue \n", "\n", " try:\n", - " with open(f'./original_spec_files/{sample_id}_invalid.json', 'r') as infile:\n", + " with open(f'./original_plus_materials/{sample_id}_procedures.json', 'r') as infile:\n", " data = json.load(infile)\n", "\n", + " print(\"OG FILE: \", data)\n", + "\n", " if str(data.get('subject_id', None)) != sample_id:\n", " print(f\"subject_id mismatch: {data.get('subject_id', None)} != {sample_id}.\")\n", "\n", @@ -5219,6 +1650,8 @@ " except FileNotFoundError:\n", " original_subj_procedures = []\n", "\n", + " print(\"ORIGINAL SUBJ PROCEDURES: \", original_subj_procedures)\n", + "\n", " spec_maker = SpecMaker(processor, sample_id, original_subj_procedures)\n", "\n", " \n", @@ -5333,7 +1766,7 @@ " lot_number=str(immuno_lot),\n", " immunolabel_class=which,\n", " fluorophore=fluorophore,\n", - " concentration=immuno_mass,\n", + " mass=immuno_mass,\n", " )\n", " )\n", " \n", @@ -5363,9 +1796,18 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 6, "metadata": {}, - "outputs": [], + "outputs": [ + { + "ename": "SyntaxError", + "evalue": "invalid syntax (971715135.py, line 16)", + "output_type": "error", + "traceback": [ + "\u001b[1;36m Cell \u001b[1;32mIn[6], line 16\u001b[1;36m\u001b[0m\n\u001b[1;33m pbs2_end =\u001b[0m\n\u001b[1;37m ^\u001b[0m\n\u001b[1;31mSyntaxError\u001b[0m\u001b[1;31m:\u001b[0m invalid syntax\n" + ] + } + ], "source": [ "\n", " # Gelation intermediary steps\n", diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb index 2cee3811..6e4966d0 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -4,16 +4,7 @@ "cell_type": "code", "execution_count": 1, "metadata": {}, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\openpyxl\\styles\\stylesheet.py:226: UserWarning: Workbook contains no default style, apply openpyxl's default\n", - " warn(\"Workbook contains no default style, apply openpyxl's default\")\n" - ] - } - ], + "outputs": [], "source": [ "import pandas as pd\n", "import requests\n", @@ -60,36 +51,60 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 3, "metadata": {}, "outputs": [], "source": [ "def get_inj_materials(subj_id):\n", + " print(materials_sheet[\"Primary\"].tolist())\n", + " print(type(subj_id))\n", + " print(type(materials_sheet[\"Primary\"].tolist()[0]))\n", + " if int(subj_id) not in materials_sheet[\"Primary\"].tolist():\n", + " logging.info(f\"Subject {subj_id} not found in materials sheet\")\n", + " return []\n", + " \n", " materials = []\n", "\n", - " subj_row = materials_sheet.loc[materials_sheet[\"Subject ID\"] == subj_id]\n", + " subj_row = materials_sheet.loc[materials_sheet[\"Primary\"] == int(subj_id)]\n", + " logging.info(f\"subj_row: {subj_row}\")\n", + " logging.info(\"hullo\")\n", " for val in [1,2,3]:\n", " virus = subj_row[f\"Virus{val}\"].values[0]\n", - " print(virus)\n", + " logging.info(f\"virus: {virus}\")\n", " if pd.isna(virus):\n", " continue\n", "\n", " virus_id = subj_row[f\"Virus{val} ID\" ].values[0]\n", "\n", " titer = subj_row[f\"Virus{val} Titer (GC/mL)\"].values[0]\n", + " logging.info(f\"titer: {titer}\")\n", "\n", " if pd.isna(titer):\n", " dose = float(subj_row[f\"Virus{val} Dose (GC/mouse)\"].values[0])\n", - " volume = float(subj_row[f\"Virus{val} Volume Injected\"].values[0].split(\"u\")[0])\n", + " volume = subj_row[f\"Virus{val} Volume Injected\"].values[0]\n", + " \n", + " if pd.isna(volume):\n", + " logging.error(f\"Volume is NA for material {val} : {subj_id}, {virus}\")\n", + " continue\n", + "\n", + " if isinstance(volume, str):\n", + " volume = float(volume.split(\"u\")[0])\n", + " logging.info(f\"dose: {dose}, volume: {volume}\")\n", "\n", - " titer = dose/(volume*.001)\n", + " titer = int(dose/(volume*.001))\n", + " else:\n", + " titer = float(titer)\n", "\n", "\n", " new_material = ViralMaterial(\n", " name=virus,\n", " titer=titer,\n", " \n", - " )\n" + " )\n", + "\n", + " materials.append(new_material)\n", + "\n", + " return materials\n" ] }, { @@ -110,38 +125,65 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609105' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 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'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609107' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 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'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='618584' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 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None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='620629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}] specimen_procedures=[] notes=None\n", @@ -152,78 +194,135 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}], 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'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': 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notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 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[{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650819', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650819' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': 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'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}] specimen_procedures=[] notes=None\n", @@ -286,26 +415,227 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 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705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': 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'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 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'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': 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'output_specimen_ids': ['658733']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658733' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}] specimen_procedures=[] notes=None\n", @@ -319,6 +649,9 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 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667353, 667354, 667355]\n", + "\n", + "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674190' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 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'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 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'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}\n" ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] } ], "source": [ @@ -420,6 +897,7 @@ " logging.info(f\"replacing surgery protocol id for subject {subj}\")\n", " surgery[\"protocol_id\"] = \"dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1\"\n", " for subj_procedure in surgery[\"procedures\"]:\n", + " logging.info(f\"checking procedure {subj_procedure} for subject {subj}\")\n", " if subj_procedure[\"procedure_type\"] == \"Perfusion\":\n", " if \"protocol_id\" not in subj_procedure.keys():\n", " logging.info(f\"adding perfusion protocol id for subject {subj}\")\n", @@ -430,9 +908,19 @@ " subj_procedure[\"protocol_id\"] = \"dx.doi.org/10.17504/protocols.io.bg5vjy66\"\n", "\n", " if subj_procedure[\"procedure_type\"] == \"Retro-orbital injection\":\n", + " logging.info(f\"checking retro-orbital injection for subject {subj}\")\n", + " materials = get_inj_materials(subj)\n", + " logging.info(f\"materials for subject {subj}: {materials}\")\n", + "\n", + " subj_procedure[\"injection_materials\"] = materials\n", " \n", " \n", "\n", + " original_procedure.write_standard_file(\n", + " output_directory=Path(\"original_plus_materials\"),\n", + " prefix=subj\n", + " )\n", + " \n", "\n", "\n", " # titer = dose / volume, with volume in ml (gc/ml) (translate to ml)\n", @@ -442,6 +930,13 @@ " # for value in [1,2,3]:\n" ] }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] + }, { "cell_type": "code", "execution_count": null, From 19a05b71b354e2ad086b31448c0450b2f1aa5040 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Wed, 1 May 2024 12:56:31 -0400 Subject: [PATCH 30/43] updates --- .gitignore | 1 + .../Mouse Tracker - RO injections.xlsx | Bin 81501 -> 103354 bytes scripts/Exaspim_ingest/ingest_exaspim.ipynb | 747 +++++++++--------- .../ingest_exaspim_materials.ipynb | 320 +++++--- 4 files changed, 605 insertions(+), 463 deletions(-) diff --git a/.gitignore b/.gitignore index fd253c7d..042a7ad6 100644 --- a/.gitignore +++ b/.gitignore @@ -31,6 +31,7 @@ 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source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-01-06 00:00:00 2023-01-06 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n" - ] - }, - { - "name": "stdout", - "output_type": "stream", - "text": [ + "2023-01-06 00:00:00 2023-01-06 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 652779 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -541,8 +535,8 @@ "2023-01-30 00:00:00 2023-01-30 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-02-15 00:00:00 2023-02-15 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653980 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -556,8 +550,8 @@ "2023-01-21 00:00:00 2023-01-28 00:00:00 654727 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-03-07 00:00:00 2023-03-07 00:00:00 654727 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653981 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653981 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653981 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -651,8 +645,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 657676 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 657676 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 657676 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -660,8 +654,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 660950 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660950 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660950 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -669,8 +663,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 651895 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651895 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651895 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -678,8 +672,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654306 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654306 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654306 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -687,8 +681,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-19 00:00:00 2023-04-19 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 661300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 661300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 661300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -696,8 +690,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 660949 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660949 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660949 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -705,8 +699,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 651897 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651897 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651897 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -714,8 +708,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654308 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654308 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654308 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -723,24 +717,24 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-19 00:00:00 2023-04-19 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665470 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665470 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 664761 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 664761 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", @@ -810,8 +804,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674185 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674185 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674185 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -819,8 +813,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674191 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674191 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674191 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -833,196 +827,196 @@ "2023-08-02 00:00:00 2023-09-02 00:00:00 668294 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 668294 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 668294 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 667857 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 667857 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 667857 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669973 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669973 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669973 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669977 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669977 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669977 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-06-19 00:00:00 2023-06-19 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-07-06 00:00:00 2023-07-06 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-06-19 00:00:00 2023-06-19 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-07-06 00:00:00 2023-07-06 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-12-11 00:00:00 NaT 674743 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 674743 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 674743 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-08-09 00:00:00 2023-08-09 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-11-20 00:00:00 2023-11-20 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-11-20 00:00:00 2023-11-20 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 675061 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 675061 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-08-09 00:00:00 2023-08-09 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-11-20 00:00:00 2023-11-20 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-11-20 00:00:00 2023-11-20 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 667354 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 667354 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 667354 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 678116 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 678116 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 678116 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 661293 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 661293 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 661293 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-10 00:00:00 2023-12-14 00:00:00 663412 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 663412 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 663412 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-08-09 00:00:00 2023-08-09 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-10 00:00:00 2023-12-14 00:00:00 675057 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 675057 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 675057 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-08-09 00:00:00 2023-08-09 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 664762 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 664762 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 664762 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 667352 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 667352 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 667352 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 670944 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 670944 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 670944 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-09 00:00:00 2023-08-09 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-09 00:00:00 2023-08-09 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-06 00:00:00 2023-11-08 00:00:00 670471 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670471 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670471 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 670339 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670339 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670339 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Chicken Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 670344 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670344 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670344 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Chicken Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 681465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 681465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 681465 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 681469 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 681469 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 681469 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 676009 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 676009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 676009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 676007 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 676007 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 676007 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-09-07 00:00:00 2023-09-07 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-09-07 00:00:00 2023-09-07 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 671477 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 671477 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 671477 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 670808 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670808 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670808 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 670809 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670809 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670809 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-08-15 00:00:00 2023-08-15 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-10-19 00:00:00 2023-10-19 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-08-15 00:00:00 2023-08-15 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-19 00:00:00 2023-10-19 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 674741 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 674741 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1035,8 +1029,8 @@ "2023-11-14 00:00:00 2023-12-14 00:00:00 659142 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 659142 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 659142 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", @@ -1051,26 +1045,26 @@ "2023-11-17 00:00:00 2023-12-22 00:00:00 673998 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 673998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 673998 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 655147 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 655147 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 655147 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 673996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 673996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 673996 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-09-13 00:00:00 2023-09-13 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-10-24 00:00:00 2023-10-24 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-09-13 00:00:00 2023-09-13 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-10-24 00:00:00 2023-10-24 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 665083 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 665083 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1093,16 +1087,16 @@ "2023-11-01 00:00:00 2023-11-14 00:00:00 675375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-11-15 00:00:00 2023-11-15 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-12-07 00:00:00 2023-12-07 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-10 00:00:00 2024-02-13 00:00:00 675374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-11-15 00:00:00 2023-11-15 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-12-07 00:00:00 2023-12-07 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-07 00:00:00 2023-12-07 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675058 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675058 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1110,208 +1104,208 @@ "2024-02-12 00:00:00 2024-03-12 00:00:00 109_11 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 109_11 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 109_11 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 109_11 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-22 00:00:00 2024-02-20 00:00:00 109_03 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 109_03 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 109_03 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 655146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 655146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-12 00:00:00 2024-02-15 00:00:00 655145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 655145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 655145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-12 00:00:00 2024-02-15 00:00:00 697837 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 697837 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 697837 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-12 00:00:00 2024-03-12 00:00:00 697836 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 697836 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 697836 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-04 00:00:00 2023-12-04 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-04 00:00:00 2023-12-04 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 686955 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 686955 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 686955 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 667998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 667998 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 686951 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 686951 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 686951 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 667996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 667996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 667996 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 701772 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 701772 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 701772 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 673163 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 673163 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 673163 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 659145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 659145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 659145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-22 00:00:00 2023-12-22 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-10 00:00:00 2024-01-10 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-22 00:00:00 2023-12-22 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-10 00:00:00 2024-01-10 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 701773 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 701773 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 701773 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 678794 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 678794 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 678794 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-21 00:00:00 2023-12-21 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 673161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 673161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 673161 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 678112 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 678112 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 678112 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 667997 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 667997 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 667997 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 673157 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 673157 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 673157 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2023-12-21 00:00:00 2023-12-21 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-09 00:00:00 2024-01-09 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2023-12-21 00:00:00 2023-12-21 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-09 00:00:00 2024-01-09 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708373 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708373 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708370 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708370 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708368 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708368 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708369 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708369 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708375 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708375 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-26 00:00:00 NaT 708376 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708376 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-01-12 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-30 00:00:00 2024-01-30 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-12 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-30 00:00:00 2024-01-30 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-12 00:00:00 2024-02-11 00:00:00 705161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 705161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1322,209 +1316,209 @@ "2024-01-04 00:00:00 2024-01-18 00:00:00 685221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-25 00:00:00 2024-01-25 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-11 00:00:00 NaT 685222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 685222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 685222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-25 00:00:00 2024-01-25 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-11 00:00:00 NaT 684101 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 684101 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 684101 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-25 00:00:00 2024-01-25 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 684100 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 684100 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 684100 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-01-25 00:00:00 2024-01-25 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 708365 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 708365 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 708365 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-01-25 00:00:00 2024-01-25 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-12 00:00:00 2024-02-12 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-01-25 00:00:00 2024-01-25 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-12 00:00:00 2024-02-12 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-15 00:00:00 NaT 709393 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709393 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709393 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-15 00:00:00 NaT 709394 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709394 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709394 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-26 00:00:00 NaT 709222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-02-05 00:00:00 2024-02-05 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-21 00:00:00 NaT 709221 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709221 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-02-05 00:00:00 2024-02-05 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-26 00:00:00 NaT 709220 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709220 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709220 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-02-05 00:00:00 2024-02-05 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-26 00:00:00 NaT 706434 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-15 00:00:00 NaT 706300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-21 00:00:00 NaT 706301 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706301 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706301 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703071 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703071 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703066 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703066 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-21 00:00:00 NaT 703070 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703070 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703070 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-15 00:00:00 NaT 703067 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703067 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703067 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-05 00:00:00 2024-02-05 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-05 00:00:00 2024-02-05 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709839 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709839 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 709013 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709013 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709013 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709838 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709838 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 704523 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704523 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704523 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 713601 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 713601 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 713601 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 713600 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 713600 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704521 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704521 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 709203 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709203 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709203 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-02-23 00:00:00 2024-02-23 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-02-23 00:00:00 2024-02-23 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709016 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709016 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-04 00:00:00 NaT 704522 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704522 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704522 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-03-01 00:00:00 2024-03-01 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "2024-03-11 00:00:00 2024-03-11 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-01 00:00:00 2024-03-01 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", + "2024-03-11 00:00:00 2024-03-11 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 715347 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 715347 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1548,23 +1542,23 @@ "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 717445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 717445 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 717445 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 717445 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 717444 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 717444 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 717444 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 717444 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 712228 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 712228 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 712228 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 712228 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 709011 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 709011 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "2024-03-22 00:00:00 2024-03-22 00:00:00 709011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", + "2024-03-22 00:00:00 2024-03-22 00:00:00 709011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 709014 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 709014 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1602,13 +1596,16 @@ "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 683790 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "ORIGINAL SUBJ PROCEDURES: []\n", - "2024-04-03 00:00:00 NaT 717612 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n" + "2024-04-03 00:00:00 NaT 717612 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", + "{'Invitrogen', 'Abcam', 'Sicgen', 'Thermo Fisher', 'Jackson Immuno'}\n" ] } ], "source": [ "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, Surgery\n", "\n", + "missing_companies = []\n", + "\n", "for row_idx, row in sample_sheet.iterrows():\n", "\n", " items = []\n", @@ -1705,6 +1702,8 @@ " immuno_primary_start = row[f'Immuno: Primary Ab Start Date']\n", "\n", " antibody_courses = {}\n", + "\n", + " \n", " \n", " for which in ['Primary', 'Secondary']:\n", " antibodies = []\n", @@ -1732,7 +1731,15 @@ " try:\n", " source = Organization.from_abbreviation(info_row['Company'].values[0])\n", " except KeyError:\n", - " source = Organization.OTHER\n", + " mapping = {\n", + " \"Jackson Immuno\": Organization.JAX,\n", + " \"Sicgen\": Organization.OTHER,\n", + " \"Thermo Fisher\": Organization.THERMOFISHER,\n", + " \"Invitrogen\": Organization.THERMOFISHER,\n", + " \"Abcam\": Organization.ABCAM,\n", + " }\n", + " missing_companies.append(info_row['Company'].values[0])\n", + " source = mapping[info_row['Company'].values[0]]\n", "\n", " rrid = info_row['RRID'].values[0]\n", " if pd.isna(rrid):\n", @@ -1791,6 +1798,8 @@ " # spec_maker.load_spec_models(new_procedures)\n", " spec_maker.make_procedures(Path(\"output\"), new_procedures)\n", " \n", + "print(set(missing_companies))\n", + "\n", "\n" ] }, diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb index 6e4966d0..f4180c1e 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -15,7 +15,7 @@ "from enum import Enum\n", "from pathlib import Path\n", "\n", - "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial\n", + "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial, TarsVirusIdentifiers\n", "\n", "from aind_data_schema.models.organizations import Organization\n", "\n", @@ -53,8 +53,97 @@ "cell_type": "code", "execution_count": 3, "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "{}\n" + ] + } + ], + "source": [ + "subj_procedures = {}\n", + "\n", + "download_files = False\n", + "\n", + "files = glob.glob(\"./original_spec_files/*.json\")\n", + "\n", + "\n", + "tars_models = {}\n", + "\n", + "if download_files:\n", + " for file in files: \n", + " print(file)\n", + " subj_id = file.split(\"\\\\\")[-1].split(\"_\")[0]\n", + " print(subj_id)\n", + " if int(subj_id) not in materials_sheet[\"Primary\"].tolist():\n", + " print(\"not found\")\n", + " continue\n", + "\n", + " subj_row = materials_sheet.loc[materials_sheet[\"Primary\"] == int(subj_id)]\n", + " \n", + " if len(subj_id) != 6:\n", + " continue\n", + "\n", + " for val in [1,2,3]:\n", + " tars_id = subj_row[f\"Virus{val} ID\"].values[0]\n", + " print(tars_id)\n", + "\n", + " if pd.isna(tars_id):\n", + " continue\n", + "\n", + " if tars_id not in tars_models.keys():\n", + " request = requests.get(f\"http://aind-metadata-service/tars_injection_materials/{tars_id}\")\n", + "\n", + " if request.status_code == 404 or request.status_code == 500:\n", + " print(f\"{tars_id} model not found\")\n", + " continue\n", + "\n", + " print(f\"code: {request.status_code}\")\n", + "\n", + " \n", + " item = request.json()\n", + "\n", + " if not item or not item['data']:\n", + " continue\n", + "\n", + " if item['message'] == 'Valid Model.':\n", + " tars_models[tars_id] = item['data']\n", + " else:\n", + " print(f\"invalid model for {tars_id}\")\n", + " print(item['message'])\n", + "\n", + "print(tars_models)\n", + "\n", + "for key, value in tars_models.items():\n", + " with open(f'./tars_info/{key}.json', 'w') as outfile:\n", + " json.dump(value, outfile)" + ] + }, + { + "cell_type": "code", + "execution_count": 4, + "metadata": {}, + "outputs": [], + "source": [ + "\n", + "tars_files = glob.glob(\"./tars_info/*.json\")\n", + "tars_models = {}\n", + "for file in tars_files:\n", + " with open(file) as json_file:\n", + " data = json.load(json_file)\n", + " tars_models[data['tars_identifiers'][\"prep_lot_number\"]] = data\n" + ] + }, + { + "cell_type": "code", + "execution_count": 5, + "metadata": {}, "outputs": [], "source": [ + "sanity_checks = []\n", + "\n", "def get_inj_materials(subj_id):\n", " print(materials_sheet[\"Primary\"].tolist())\n", " print(type(subj_id))\n", @@ -70,18 +159,35 @@ " logging.info(\"hullo\")\n", " for val in [1,2,3]:\n", " virus = subj_row[f\"Virus{val}\"].values[0]\n", - " logging.info(f\"virus: {virus}\")\n", + " logging.info(f\"virus{val}: {virus}\")\n", " if pd.isna(virus):\n", " continue\n", "\n", - " virus_id = subj_row[f\"Virus{val} ID\" ].values[0]\n", + " virus_id = subj_row[f\"Virus{val} ID\" ].values[0] # use this to look up TARS info\n", "\n", " titer = subj_row[f\"Virus{val} Titer (GC/mL)\"].values[0]\n", + " dose = float(subj_row[f\"Virus{val} Dose (GC/mouse)\"].values[0])\n", + " volume = subj_row[f\"Virus{val} Volume Injected\"].values[0]\n", " logging.info(f\"titer: {titer}\")\n", "\n", - " if pd.isna(titer):\n", - " dose = float(subj_row[f\"Virus{val} Dose (GC/mouse)\"].values[0])\n", - " volume = subj_row[f\"Virus{val} Volume Injected\"].values[0]\n", + "\n", + " try:\n", + " logging.info(\"checking titer vs dose/volume\")\n", + " logging.info(f\"titer: {titer}, dose: {dose}, volume: {volume}\")\n", + " volume = float(volume.split(\"u\")[0])\n", + " computed_titer = int(dose/(volume*.001))\n", + " titer = float(titer)\n", + "\n", + " if titer != computed_titer:\n", + " logging.info(f\"Computed titer: {computed_titer}, titer: {titer}\")\n", + "\n", + " except:\n", + " logging.info(\"something missing\")\n", + "\n", + "\n", + " if pd.isna(titer): # actually, do the calculation for everything\n", + " logging.info(\"titer is NA\")\n", + " \n", " \n", " if pd.isna(volume):\n", " logging.error(f\"Volume is NA for material {val} : {subj_id}, {virus}\")\n", @@ -95,21 +201,32 @@ " else:\n", " titer = float(titer)\n", "\n", + " # do some checks to see how accurate titer is to dose/volume\n", + " \n", + " tars = None\n", + " if virus_id in tars_models.keys():\n", + " tars = TarsVirusIdentifiers.model_validate(tars_models[virus_id][\"tars_identifiers\"])\n", + " logging.info(f\"tars for {subj_id}: {tars}\")\n", "\n", + " logging.info(f\"titer: {titer}, dose: {dose}, volume: {volume}\")\n", " new_material = ViralMaterial(\n", " name=virus,\n", " titer=titer,\n", - " \n", + " tars_identifiers=tars, \n", " )\n", "\n", + " logging.info(f\"new material: {new_material}\")\n", + "\n", " materials.append(new_material)\n", "\n", + " logging.info(f\"finished virus {val}\")\n", + "\n", " return materials\n" ] }, { "cell_type": "code", - "execution_count": 4, + "execution_count": 6, "metadata": {}, "outputs": [ { @@ -380,45 +497,7 @@ "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 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668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653153' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653159' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 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schema_version='0.11.5' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653431' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653432' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653980' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 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667353, 667354, 667355]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}\n" + "\n" ] }, { @@ -572,29 +651,6 @@ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n" ] }, @@ -602,6 +658,44 @@ "name": "stdout", "output_type": "stream", "text": [ + "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653153' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 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'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653980' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 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"describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653981' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -750,29 +844,7 @@ "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 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'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674185' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 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'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674190' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 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662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 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613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}\n" + "\n" ] }, { @@ -797,10 +869,14 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -808,6 +884,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -819,6 +896,12 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", @@ -847,6 +930,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -856,6 +940,52 @@ " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674185' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 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'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674190' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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667353, 667354, 667355]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}\n", + "[]\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -920,7 +1050,9 @@ " output_directory=Path(\"original_plus_materials\"),\n", " prefix=subj\n", " )\n", - " \n", + "\n", + " \n", + "print(sanity_checks)\n", "\n", "\n", " # titer = dose / volume, with volume in ml (gc/ml) (translate to ml)\n", From 88986005ffe97bb0b9dbf93d5a67ed752944d32d Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 2 May 2024 17:29:32 -0400 Subject: [PATCH 31/43] Update ingest_exaspim_materials.ipynb --- .../ingest_exaspim_materials.ipynb | 530 ++++++++++-------- 1 file changed, 298 insertions(+), 232 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb index f4180c1e..d0f89891 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -168,18 +168,48 @@ " titer = subj_row[f\"Virus{val} Titer (GC/mL)\"].values[0]\n", " dose = float(subj_row[f\"Virus{val} Dose (GC/mouse)\"].values[0])\n", " volume = subj_row[f\"Virus{val} Volume Injected\"].values[0]\n", + " mix_volume = subj_row[f\"Virus Mix Volume injected\"].values[0]\n", + " if pd.isna(mix_volume):\n", + " mix_volume = .1\n", " logging.info(f\"titer: {titer}\")\n", + " logging.info(f\"mix vol: {mix_volume}\")\n", + "\n", + " if not pd.isna(mix_volume):\n", + " logging.info(\"FOUND MIX VOL: \" + str(mix_volume))\n", "\n", "\n", " try:\n", " logging.info(\"checking titer vs dose/volume\")\n", - " logging.info(f\"titer: {titer}, dose: {dose}, volume: {volume}\")\n", - " volume = float(volume.split(\"u\")[0])\n", - " computed_titer = int(dose/(volume*.001))\n", - " titer = float(titer)\n", + " logging.info(f\"titer: {titer}, dose: {dose}, volume: {volume}, mix volume: {mix_volume}\")\n", + " \n", + " original_titer = float(titer)\n", + " titer = original_titer\n", + "\n", + " computed_titer = False\n", + " try:\n", + " logging.info(\"trying\")\n", + " if not pd.isna(volume):\n", + " logging.info(\"volume is not NA\")\n", + " volume = float(volume.split(\"u\")[0])\n", + " titer = int(dose/(volume*.001))\n", + " computed_titer = True\n", + " except:\n", + " logging.info(\"volume is not a number\")\n", + " \n", + " logging.info(\"out\")\n", + " mix_titer = None\n", + " if not pd.isna(mix_volume):\n", + " mix_volume = float(mix_volume.split(\"u\")[0])\n", + " logging.info(\"mix volume is not NA\")\n", + " mix_titer = int(dose/(mix_volume*.0001))\n", + " logging.info(f\"mix titer: {mix_titer}\")\n", + " \n", "\n", - " if titer != computed_titer:\n", - " logging.info(f\"Computed titer: {computed_titer}, titer: {titer}\")\n", + " if not pd.isna(mix_titer) and not pd.isna(titer):\n", + " if mix_titer != titer:\n", + " logging.info(f\"MISSMATCH: titer output: {titer} (computed: {computed_titer}), original titer: {original_titer}, mix titer: {mix_titer}, mix vol: {mix_volume}\")\n", + " else:\n", + " logging.info(f\"something na -- mix titer: {mix_titer}, titer: {titer}\")\n", "\n", " except:\n", " logging.info(\"something missing\")\n", @@ -304,7 +334,61 @@ "{'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='620629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='620631' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}\n", @@ -383,7 +467,59 @@ "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 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655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", "\n", - "\n", + "\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648858' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}] specimen_procedures=[] notes=None\n", @@ -433,7 +569,51 @@ "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650011' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 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'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653159' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -529,54 +722,6 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -616,41 +761,6 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n" ] }, @@ -658,31 +768,6 @@ "name": "stdout", "output_type": "stream", "text": [ - "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}\n", - "{'describedBy': 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653153' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': 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'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653158' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 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'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653159' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 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'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653431' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}\n", @@ -764,7 +849,65 @@ "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "[730901, 730902, 730903, 730904, 721826, 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648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", "\n", - "\n", + "\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660950' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}] specimen_procedures=[] notes=None\n", @@ -844,66 +987,36 @@ "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 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'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 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613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}\n", + "[]\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -930,7 +1043,6 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -940,52 +1052,6 @@ " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n" - ] - }, - { - "name": "stdout", - "output_type": "stream", - "text": [ - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674185' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 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'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 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"c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", From 304228298dadf2fbbf6a82c010cc3f67d868e86e Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 2 May 2024 18:50:07 -0400 Subject: [PATCH 32/43] making changes to injection ingest --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 242 +++++++++--------- .../ingest_exaspim_materials.ipynb | 10 +- 2 files changed, 129 insertions(+), 123 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index 78b4605a..10b2e159 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -282,33 +282,33 @@ "2021-11-10 00:00:00 2021-12-03 00:00:00 576404 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2021-10-01 00:00:00 2021-10-11 00:00:00 576404 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2021-10-25 00:00:00 2021-11-03 00:00:00 576404 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 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[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 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'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-05-05 00:00:00 2022-06-02 00:00:00 609105 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-01-21 00:00:00 2022-02-02 00:00:00 609105 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-02-03 00:00:00 2022-02-15 00:00:00 609105 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 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'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 609107 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 609107 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 609107 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 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'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 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None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 609281 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 609281 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 614978 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 614978 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 614978 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 614980 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 614980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 614980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 615296 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 615296 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 615296 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -317,8 +317,8 @@ "2022-06-16 00:00:00 2022-07-15 00:00:00 603033 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2021-12-26 00:00:00 2022-01-05 00:00:00 603033 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-01-05 00:00:00 2022-01-14 00:00:00 603033 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-09-23 00:00:00 2022-10-26 00:00:00 618584 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-10 00:00:00 2022-06-23 00:00:00 618584 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-06-27 00:00:00 2022-07-14 00:00:00 618584 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -332,8 +332,8 @@ "2022-11-09 00:00:00 2022-12-01 00:00:00 620629 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-21 00:00:00 2022-06-30 00:00:00 620629 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-07-06 00:00:00 2022-07-12 00:00:00 620629 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-01 00:00:00 2023-02-27 00:00:00 648860 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648860 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648860 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -341,26 +341,26 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648861 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648861 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648861 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648858 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648858 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648858 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648862 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648862 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648862 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-09 00:00:00 2023-03-08 00:00:00 648077 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648077 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648077 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -368,32 +368,32 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-06 00:00:00 648079 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648079 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648079 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 648079 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-06 00:00:00 648698 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648698 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648698 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 648698 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648699 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648699 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648700 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648700 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648700 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-28 00:00:00 2023-06-03 00:00:00 648696 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648696 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648696 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -401,12 +401,12 @@ "2023-03-21 00:00:00 2023-03-21 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-05 00:00:00 2023-04-05 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648695 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648695 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-28 00:00:00 2023-06-03 00:00:00 648697 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648697 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648697 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -432,22 +432,22 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-05 00:00:00 650008 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650008 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650008 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 650008 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-04 00:00:00 650009 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 650009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-09 00:00:00 2023-03-08 00:00:00 650010 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650010 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650010 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -455,8 +455,8 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-23 00:00:00 2023-02-20 00:00:00 650011 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650011 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650011 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -464,20 +464,20 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 652779 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 652779 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-02-13 00:00:00 2023-02-13 00:00:00 652779 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 652781 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 652781 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-02-13 00:00:00 2023-02-13 00:00:00 652781 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-22 00:00:00 648434 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -485,8 +485,8 @@ "2023-02-13 00:00:00 2023-02-13 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-30 00:00:00 2023-03-30 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-17 00:00:00 648435 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648435 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648435 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -494,14 +494,14 @@ "2023-02-13 00:00:00 2023-02-13 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-30 00:00:00 2023-03-30 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648436 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648436 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-02-13 00:00:00 2023-02-13 00:00:00 648436 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 651305 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 651305 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 651305 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -535,8 +535,8 @@ "2023-01-30 00:00:00 2023-01-30 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-02-15 00:00:00 2023-02-15 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653980 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -544,14 +544,14 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 654727 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 654727 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-03-07 00:00:00 2023-03-07 00:00:00 654727 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653981 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653981 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653981 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -559,8 +559,8 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653159 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653159 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653159 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -568,8 +568,8 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-17 00:00:00 653158 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653158 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653158 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -595,22 +595,22 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-26 00:00:00 2023-02-16 00:00:00 613814 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-05 00:00:00 2022-12-14 00:00:00 613814 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-15 00:00:00 2022-12-23 00:00:00 613814 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-21 00:00:00 2023-01-21 00:00:00 613814 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-26 00:00:00 2023-02-16 00:00:00 618583 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-05 00:00:00 2022-12-14 00:00:00 618583 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-15 00:00:00 2022-12-23 00:00:00 618583 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-21 00:00:00 2023-01-21 00:00:00 618583 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 659146 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 659146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 659146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -618,8 +618,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 653153 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 653153 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 653153 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -645,8 +645,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 657676 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 657676 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 657676 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -654,8 +654,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 660950 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660950 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660950 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -663,8 +663,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 651895 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651895 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651895 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -672,8 +672,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654306 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654306 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654306 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -681,8 +681,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-19 00:00:00 2023-04-19 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 661300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 661300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 661300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -690,8 +690,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 660949 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660949 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660949 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -699,8 +699,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 651897 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651897 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651897 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -708,8 +708,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654308 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654308 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654308 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -717,52 +717,52 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-19 00:00:00 2023-04-19 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665470 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665470 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 664761 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 664761 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665082 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665082 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665082 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665081 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665081 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 652441 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 652441 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 652445 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 652445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", @@ -786,8 +786,8 @@ "2023-04-03 00:00:00 NaT 516429 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 516429 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 386086956521739, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 386086956521739, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 44400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 44400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674184 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674184 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674184 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -795,8 +795,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 386086956521739, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 386086956521739, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 44400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 44400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674190 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674190 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674190 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -804,8 +804,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 48700000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 48700000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674185 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674185 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674185 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -813,8 +813,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 423478260869565, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 48700000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 48700000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674191 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674191 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674191 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -831,8 +831,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 667857 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 667857 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 667857 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -840,8 +840,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669973 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669973 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669973 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -849,8 +849,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669977 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669977 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669977 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1597,7 +1597,7 @@ "2024-04-03 00:00:00 NaT 683790 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 717612 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "{'Invitrogen', 'Abcam', 'Sicgen', 'Thermo Fisher', 'Jackson Immuno'}\n" + "{'Thermo Fisher', 'Sicgen', 'Abcam', 'Invitrogen', 'Jackson Immuno'}\n" ] } ], diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb index d0f89891..6cb451fa 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -171,6 +171,9 @@ " mix_volume = subj_row[f\"Virus Mix Volume injected\"].values[0]\n", " if pd.isna(mix_volume):\n", " mix_volume = .1\n", + " else:\n", + " mix_volume = float(mix_volume.split(\"u\")[0])\n", + " mix_volume = mix_volume*.0001\n", " logging.info(f\"titer: {titer}\")\n", " logging.info(f\"mix vol: {mix_volume}\")\n", "\n", @@ -199,11 +202,14 @@ " logging.info(\"out\")\n", " mix_titer = None\n", " if not pd.isna(mix_volume):\n", - " mix_volume = float(mix_volume.split(\"u\")[0])\n", + " \n", " logging.info(\"mix volume is not NA\")\n", - " mix_titer = int(dose/(mix_volume*.0001))\n", + " mix_titer = int(dose/(mix_volume))\n", " logging.info(f\"mix titer: {mix_titer}\")\n", " \n", + " if mix_titer is not None:\n", + " titer = mix_titer\n", + "\n", "\n", " if not pd.isna(mix_titer) and not pd.isna(titer):\n", " if mix_titer != titer:\n", From 887819e2b75175bbc8cba91352bfc416f4b673d6 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 16 May 2024 13:06:52 -0400 Subject: [PATCH 33/43] updates --- .../Mouse Tracker - Molecular Anatomy.xlsx | Bin 0 -> 352954 bytes scripts/Exaspim_ingest/ingest_exaspim.ipynb | 289 +++---- .../ingest_exaspim_materials.ipynb | 712 +++++++++--------- 3 files changed, 461 insertions(+), 540 deletions(-) create mode 100644 scripts/Exaspim_ingest/Mouse Tracker - Molecular Anatomy.xlsx diff --git a/scripts/Exaspim_ingest/Mouse Tracker - Molecular Anatomy.xlsx b/scripts/Exaspim_ingest/Mouse Tracker - Molecular Anatomy.xlsx new file mode 100644 index 0000000000000000000000000000000000000000..94d6f0546f55626d3dc79b494165da15dafe2f17 GIT binary patch literal 352954 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z+ockQ{C5mkeA6Hi0U!X4?Tq9d?d+ZCjO-ju{=vc_C?m_`Yt$d?`}`To|d@nvSC&*@!CZ@!k8Z#}xsFeR8emYC24v4H4+WX+Q5$I7*3lU>$p~(gias z--01R@s8pOb~HhSLxeg;Jw{$7EXZr5yFP}8SauViu(1e0=Wvgy^@WXQW=PK^PJCWq zo|yVeDc{>sMW_f#mtVLqc1zr}&F)pewaj9OzR%6SW>!ETns0c+|8jJZFt#?0zXKWr^j~<- zzfR#lUTF#0**crpI_oKW*qb=%{3F8UrT){PNrj&1{`;fS-vcxBf2ec5`^dj0=YLMg ze-{SjugM&Ii;}a*!TU;|L}Yb?d+`nTdR^4r3SCxBC+o_u>M0l5BX2=zZ(8W zn()6C|8*y#V+;O(yn_J1un_zcBm9>YEX@DE6aNks{%4Bu_e1$RjQB4XF$mEAJ(PcU z`6rtA?=F8Qt^Vaw3;j=*zjIgrZt!iyZfN>EFp7e@Q!V|0Vr9=i~1V ze^1i>a$r*b`*-kPQ?|bw{^yMUmmL5An1KjXH%6zF%* T0RX^!KheKqDn{?SKLGrH`~(P) literal 0 HcmV?d00001 diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index 10b2e159..ec198182 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -282,33 +282,33 @@ "2021-11-10 00:00:00 2021-12-03 00:00:00 576404 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2021-10-01 00:00:00 2021-10-11 00:00:00 576404 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2021-10-25 00:00:00 2021-11-03 00:00:00 576404 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-05-05 00:00:00 2022-06-02 00:00:00 609105 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-01-21 00:00:00 2022-02-02 00:00:00 609105 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-02-03 00:00:00 2022-02-15 00:00:00 609105 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 609107 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 609107 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 609107 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 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'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 609281 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 609281 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 609281 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': 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'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 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'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 614978 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 614978 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 614978 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 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'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 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'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 614980 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 614980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 614980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 615296 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 615296 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 615296 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -317,8 +317,8 @@ "2022-06-16 00:00:00 2022-07-15 00:00:00 603033 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2021-12-26 00:00:00 2022-01-05 00:00:00 603033 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-01-05 00:00:00 2022-01-14 00:00:00 603033 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-09-23 00:00:00 2022-10-26 00:00:00 618584 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-10 00:00:00 2022-06-23 00:00:00 618584 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-06-27 00:00:00 2022-07-14 00:00:00 618584 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -332,8 +332,8 @@ "2022-11-09 00:00:00 2022-12-01 00:00:00 620629 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-21 00:00:00 2022-06-30 00:00:00 620629 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-07-06 00:00:00 2022-07-12 00:00:00 620629 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-01 00:00:00 2023-02-27 00:00:00 648860 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648860 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648860 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -341,26 +341,26 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648861 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648861 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648861 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648858 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648858 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648858 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648862 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648862 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648862 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-09 00:00:00 2023-03-08 00:00:00 648077 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648077 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648077 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -368,32 +368,32 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 49100000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-06 00:00:00 648079 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648079 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648079 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 648079 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-06 00:00:00 648698 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648698 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648698 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 648698 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648699 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648699 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648700 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648700 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648700 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-28 00:00:00 2023-06-03 00:00:00 648696 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648696 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648696 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -401,12 +401,12 @@ "2023-03-21 00:00:00 2023-03-21 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-05 00:00:00 2023-04-05 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648695 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648695 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-28 00:00:00 2023-06-03 00:00:00 648697 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648697 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648697 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -432,22 +432,22 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-05 00:00:00 650008 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650008 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650008 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 650008 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-04 00:00:00 650009 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 650009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-09 00:00:00 2023-03-08 00:00:00 650010 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650010 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650010 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -455,8 +455,8 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-23 00:00:00 2023-02-20 00:00:00 650011 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650011 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650011 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -464,20 +464,20 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 652779 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 652779 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-02-13 00:00:00 2023-02-13 00:00:00 652779 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 652781 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 652781 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-02-13 00:00:00 2023-02-13 00:00:00 652781 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-22 00:00:00 648434 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -485,8 +485,8 @@ "2023-02-13 00:00:00 2023-02-13 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-30 00:00:00 2023-03-30 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-17 00:00:00 648435 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648435 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648435 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -494,14 +494,14 @@ "2023-02-13 00:00:00 2023-02-13 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-30 00:00:00 2023-03-30 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648436 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648436 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-02-13 00:00:00 2023-02-13 00:00:00 648436 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 651305 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 651305 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 651305 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -535,8 +535,8 @@ "2023-01-30 00:00:00 2023-01-30 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-02-15 00:00:00 2023-02-15 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653980 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -544,14 +544,14 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 654727 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 654727 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-03-07 00:00:00 2023-03-07 00:00:00 654727 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653981 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653981 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653981 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -559,8 +559,8 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653159 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653159 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653159 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -568,8 +568,8 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-17 00:00:00 653158 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653158 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653158 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -595,22 +595,22 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-26 00:00:00 2023-02-16 00:00:00 613814 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-05 00:00:00 2022-12-14 00:00:00 613814 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-15 00:00:00 2022-12-23 00:00:00 613814 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-21 00:00:00 2023-01-21 00:00:00 613814 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 24400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-26 00:00:00 2023-02-16 00:00:00 618583 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-05 00:00:00 2022-12-14 00:00:00 618583 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-15 00:00:00 2022-12-23 00:00:00 618583 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-21 00:00:00 2023-01-21 00:00:00 618583 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 659146 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 659146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 659146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -618,8 +618,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 653153 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 653153 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 653153 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -645,8 +645,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 657676 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 657676 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 657676 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -654,8 +654,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 660950 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660950 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660950 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -663,8 +663,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 651895 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651895 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651895 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -672,8 +672,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654306 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654306 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654306 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -681,8 +681,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-19 00:00:00 2023-04-19 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 661300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 661300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 661300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -690,8 +690,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 660949 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660949 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660949 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -699,8 +699,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 651897 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651897 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651897 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -708,8 +708,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654308 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654308 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654308 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -717,52 +717,52 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-19 00:00:00 2023-04-19 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665470 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665470 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 664761 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 664761 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665082 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665082 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665082 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665081 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665081 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 652441 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 652441 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 652445 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 652445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", @@ -786,8 +786,8 @@ "2023-04-03 00:00:00 NaT 516429 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 516429 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 44400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 44400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674184 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674184 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674184 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -795,8 +795,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 44400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 44400000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674190 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674190 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674190 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -804,8 +804,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 48700000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 48700000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674185 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674185 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674185 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -813,8 +813,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 48700000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 75700000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 48700000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674191 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674191 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674191 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -831,8 +831,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 667857 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 667857 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 667857 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -840,8 +840,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669973 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669973 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669973 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -849,8 +849,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 41300000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669977 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669977 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669977 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1597,7 +1597,7 @@ "2024-04-03 00:00:00 NaT 683790 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 717612 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "{'Thermo Fisher', 'Sicgen', 'Abcam', 'Invitrogen', 'Jackson Immuno'}\n" + "{'Abcam', 'Sicgen', 'Invitrogen', 'Thermo Fisher', 'Jackson Immuno'}\n" ] } ], @@ -1802,53 +1802,6 @@ "\n", "\n" ] - }, - { - "cell_type": "code", - "execution_count": 6, - "metadata": {}, - "outputs": [ - { - "ename": "SyntaxError", - "evalue": "invalid syntax (971715135.py, line 16)", - "output_type": "error", - "traceback": [ - "\u001b[1;36m Cell \u001b[1;32mIn[6], line 16\u001b[1;36m\u001b[0m\n\u001b[1;33m pbs2_end =\u001b[0m\n\u001b[1;37m ^\u001b[0m\n\u001b[1;31mSyntaxError\u001b[0m\u001b[1;31m:\u001b[0m invalid syntax\n" - ] - } - ], - "source": [ - "\n", - " # Gelation intermediary steps\n", - " mbs_end = row['Gelation: MBS End']\n", - " acx_start = row['Gelation: AcX Start']\n", - " acx_end = row['Gelation: AcX End']\n", - " pbs_start = row['Gelation: PBS Wash Start']\n", - " pbs_end = row['Gelation: PBS Wash End']\n", - " stock_start = row['Gelation: Stock X + VA-044 Equilibration Start']\n", - " stock_end = row['Gelation: Stock X + VA-044 Equilibration End']\n", - " prok_rt_start = row['Gelation + ProK RT Start']\n", - " prok_rt_end = row['Gelation + ProK RT End']\n", - " prok_rt_time = row['Duration (days)']\n", - " prok_37c_start = row['Gelation + Add\\'l ProK 37C Start']\n", - " prok_37c_end = row['Gelation + Add\\'l ProK 37C End']\n", - " prok_37c_time = row['Duration (days) Gelation + Add\\'l ProK 37C 37C']\n", - " pbs2_start = row['PBS Wash Start']\n", - " pbs2_end = \n", - " pbs_stored = row['Date of Storage in PBS Az 0.05% @4C']\n", - " expansion_start = row['Expansion Start Date']\n", - " expansion_end = row['Expansion End Date']\n", - " notes1 = row['Notes']\n", - " notes2 = row['Notes II']\n", - " notes3 = row['Notes III']" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [] } ], "metadata": { diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb index 6cb451fa..7cc322ef 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -26,7 +26,8 @@ "import logging\n", "\n", "\n", - "materials_sheet = pd.read_excel(\"./Mouse Tracker - RO injections.xlsx\", sheet_name=\"Mouse Tracker - RO injections\", header=[0], converters={})" + "\n", + "materials_sheet = pd.read_excel(\"./Mouse Tracker - Molecular Anatomy.xlsx\", sheet_name=\"Mouse Tracker - Molecular Anato\", header=[0], converters={})\n" ] }, { @@ -77,11 +78,11 @@ " print(file)\n", " subj_id = file.split(\"\\\\\")[-1].split(\"_\")[0]\n", " print(subj_id)\n", - " if int(subj_id) not in materials_sheet[\"Primary\"].tolist():\n", + " if int(subj_id) not in materials_sheet[\"Mouse ID\"].tolist():\n", " print(\"not found\")\n", " continue\n", "\n", - " subj_row = materials_sheet.loc[materials_sheet[\"Primary\"] == int(subj_id)]\n", + " subj_row = materials_sheet.loc[materials_sheet[\"Mouse ID\"] == int(subj_id)]\n", " \n", " if len(subj_id) != 6:\n", " continue\n", @@ -145,16 +146,16 @@ "sanity_checks = []\n", "\n", "def get_inj_materials(subj_id):\n", - " print(materials_sheet[\"Primary\"].tolist())\n", + " print(materials_sheet[\"Mouse ID\"].tolist())\n", " print(type(subj_id))\n", - " print(type(materials_sheet[\"Primary\"].tolist()[0]))\n", - " if int(subj_id) not in materials_sheet[\"Primary\"].tolist():\n", + " print(type(materials_sheet[\"Mouse ID\"].tolist()[0]))\n", + " if int(subj_id) not in materials_sheet[\"Mouse ID\"].tolist():\n", " logging.info(f\"Subject {subj_id} not found in materials sheet\")\n", " return []\n", " \n", " materials = []\n", "\n", - " subj_row = materials_sheet.loc[materials_sheet[\"Primary\"] == int(subj_id)]\n", + " subj_row = materials_sheet.loc[materials_sheet[\"Mouse ID\"] == int(subj_id)]\n", " logging.info(f\"subj_row: {subj_row}\")\n", " logging.info(\"hullo\")\n", " for val in [1,2,3]:\n", @@ -208,7 +209,10 @@ " logging.info(f\"mix titer: {mix_titer}\")\n", " \n", " if mix_titer is not None:\n", + " logging.info(\"using mixed titer\")\n", " titer = mix_titer\n", + " else:\n", + " logging.info(\"using original titer\")\n", "\n", "\n", " if not pd.isna(mix_titer) and not pd.isna(titer):\n", @@ -278,202 +282,241 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609105' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609107' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609281' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='613814' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='614978' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='614980' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 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662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='615296' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='618583' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='618584' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='620629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n" - ] - }, - { - "name": "stdout", - "output_type": "stream", - "text": [ + "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='620631' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648077' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648079' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648434' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648435' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648436' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648695' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648696' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648697' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648698' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648699' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648700' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648858' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648860' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648861' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648862' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650008' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650009' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650010' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650011' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650819', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650819' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651305' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651324' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651327' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651895' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", - "\n" + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651897' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652441' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n" ] }, { @@ -482,7 +525,6 @@ "text": [ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -519,69 +561,10 @@ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n" - ] - }, - { - "name": "stdout", - "output_type": "stream", - "text": [ - "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648858' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 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'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 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'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648862' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 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WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -613,114 +596,14 @@ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n" - ] - }, - { - "name": "stdout", - "output_type": "stream", - "text": [ - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650011' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 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'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650819' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651324' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651327' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 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'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652781' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 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'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 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'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653159' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 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670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ + " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -728,6 +611,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -759,6 +643,12 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", @@ -767,6 +657,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n" ] }, @@ -774,6 +665,52 @@ "name": "stdout", "output_type": "stream", "text": [ + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652445' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652779' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652781' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653153' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653158' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653159' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653431' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}\n", @@ -783,44 +720,44 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653980' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653981' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='654306' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='654308' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='654727' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='657676' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658733', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658733' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}] specimen_procedures=[] notes=None\n", @@ -834,9 +771,9 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='659146' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660625' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}] specimen_procedures=[] notes=None\n", @@ -853,9 +790,65 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660949' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660950' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='661300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='664761' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665081' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665082' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665470' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667857' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", - "\n" + "\n" ] }, { @@ -888,6 +881,56 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -895,6 +938,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -914,62 +958,6 @@ "name": "stdout", "output_type": "stream", "text": [ - "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660950' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 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'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='661300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 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'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 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'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 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schema_version='0.11.5' subject_id='665470' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}] 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'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667857' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 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721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", - "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='668294' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}] specimen_procedures=[] notes=None\n", @@ -977,44 +965,44 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669973' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 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648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669977' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674184' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674185' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674190' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "[730901, 730902, 730903, 730904, 721826, 721828, 721829, 721830, 707208, 708367, 708375, 708376, 674184, 674190, 675374, 708365, 708370, 708371, 708364, 708368, 708369, 717442, 717443, 717444, 717445, 715344, 715345, 715346, 715347, 719651, 719652, 719653, 719654, 737561, 737562, 737563, 737564, 729504, 729505, 729506, 729507, 720811, 720812, 720813, 720814, 708366, 708373, 708374, 674185, 674191, 675375, 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 718162, 718163, 718166, 718168, 719744, 719747, 719749, 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, 730221, 730223, 730228, 730229, 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355]\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", "\n", - "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}\n", "[]\n" ] @@ -1023,26 +1011,6 @@ "name": "stderr", "output_type": "stream", "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", From 2e531b32e0a87f919b2dacadd541be4c57d37ab1 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 16 May 2024 14:11:00 -0400 Subject: [PATCH 34/43] stuff --- .../576404_procedures.json | 31 +++ .../603033_procedures.json | 31 +++ .../609105_procedures.json | 75 ++++++ .../609107_procedures.json | 75 ++++++ .../609281_procedures.json | 75 ++++++ .../613814_procedures.json | 75 ++++++ .../614978_procedures.json | 75 ++++++ .../614980_procedures.json | 75 ++++++ .../615296_procedures.json | 75 ++++++ .../618583_procedures.json | 75 ++++++ .../618584_procedures.json | 75 ++++++ .../620629_procedures.json | 31 +++ .../620631_procedures.json | 31 +++ .../648077_procedures.json | 82 +++++++ .../648079_procedures.json | 82 +++++++ .../648434_procedures.json | 75 ++++++ .../648435_procedures.json | 75 ++++++ .../648436_procedures.json | 75 ++++++ .../648695_procedures.json | 75 ++++++ .../648696_procedures.json | 75 ++++++ .../648697_procedures.json | 75 ++++++ .../648698_procedures.json | 75 ++++++ .../648699_procedures.json | 75 ++++++ 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scripts/Exaspim_ingest/tars_info/VT3213g.json | 1 + scripts/Exaspim_ingest/tars_info/VT3214g.json | 1 + scripts/Exaspim_ingest/tars_info/VT3215g.json | 1 + scripts/Exaspim_ingest/tars_info/VT3216g.json | 1 + scripts/Exaspim_ingest/tars_info/VT4299g.json | 1 + scripts/Exaspim_ingest/tars_info/VT4358g.json | 1 + scripts/Exaspim_ingest/tars_info/VT4359g.json | 1 + scripts/Exaspim_ingest/tars_info/VT4360g.json | 1 + scripts/Exaspim_ingest/tars_info/VT5048g.json | 1 + scripts/Exaspim_ingest/tars_info/VT5311C.json | 1 + scripts/Exaspim_ingest/tars_info/VT5316C.json | 1 + 276 files changed, 31141 insertions(+) create mode 100644 scripts/Exaspim_ingest/original_plus_materials/576404_procedures.json create mode 100644 scripts/Exaspim_ingest/original_plus_materials/603033_procedures.json create mode 100644 scripts/Exaspim_ingest/original_plus_materials/609105_procedures.json create mode 100644 scripts/Exaspim_ingest/original_plus_materials/609107_procedures.json create mode 100644 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"procedure_type": "Delipidation", + "procedure_name": "DCM Delipidation", + "specimen_id": "721059", + "start_date": "2024-04-03", + "end_date": "2024-04-03", + "experimenter_full_name": "Rajvi Javeri", + "protocol_id": [ + "dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1" + ], + "reagents": [], + "hcr_series": null, + "antibodies": null, + "sectioning": null, + "notes": null + } + ], + "notes": "test build model", + "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", + "schema_version": "0.13.7" +} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT3212g.json b/scripts/Exaspim_ingest/tars_info/VT3212g.json new file mode 100644 index 00000000..78b00604 --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT3212g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "pAAV-7x-TRE-3x-eGFP", "tars_identifiers": {"virus_tars_id": "AiV300022", "plasmid_tars_alias": null, "prep_lot_number": "VT3212g", "prep_date": "2022-02-04", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT3213g.json b/scripts/Exaspim_ingest/tars_info/VT3213g.json new file mode 100644 index 00000000..4f13799d --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT3213g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "pAAV-7x-TRE-tDTomato", "tars_identifiers": {"virus_tars_id": "AiV300005", "plasmid_tars_alias": null, "prep_lot_number": "VT4360g", "prep_date": "2022-09-23", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT3214g.json b/scripts/Exaspim_ingest/tars_info/VT3214g.json new file mode 100644 index 00000000..282bf6b5 --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT3214g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "pAAV-7x-TRE-3x-eGFP", "tars_identifiers": {"virus_tars_id": "AiV300002", "plasmid_tars_alias": null, "prep_lot_number": "VT4359g", "prep_date": "2022-09-21", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT3215g.json b/scripts/Exaspim_ingest/tars_info/VT3215g.json new file mode 100644 index 00000000..4f13799d --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT3215g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "pAAV-7x-TRE-tDTomato", "tars_identifiers": {"virus_tars_id": "AiV300005", "plasmid_tars_alias": null, "prep_lot_number": "VT4360g", "prep_date": "2022-09-23", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT3216g.json b/scripts/Exaspim_ingest/tars_info/VT3216g.json new file mode 100644 index 00000000..01a69d4c --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT3216g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "pAAV-7x-TRE-3x-eGFP", "tars_identifiers": {"virus_tars_id": "AiV300021", "plasmid_tars_alias": null, "prep_lot_number": "VT3213g", "prep_date": "2022-02-04", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT4299g.json b/scripts/Exaspim_ingest/tars_info/VT4299g.json new file mode 100644 index 00000000..7d473bb8 --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT4299g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "pAAV-7x-TRE-3x-eGFP", "tars_identifiers": {"virus_tars_id": "AiV300001", "plasmid_tars_alias": null, "prep_lot_number": "VT4299g", "prep_date": "2022-09-15", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT4358g.json b/scripts/Exaspim_ingest/tars_info/VT4358g.json new file mode 100644 index 00000000..5bdb8dfc --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT4358g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "NA", "tars_identifiers": {"virus_tars_id": "AiV1791_PHPeB", "plasmid_tars_alias": null, "prep_lot_number": "VT5311C", "prep_date": "2023-03-08", "prep_type": "Crude", "prep_protocol": "PHPeB-SOP#VC004"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT4359g.json b/scripts/Exaspim_ingest/tars_info/VT4359g.json new file mode 100644 index 00000000..282bf6b5 --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT4359g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "pAAV-7x-TRE-3x-eGFP", "tars_identifiers": {"virus_tars_id": "AiV300002", "plasmid_tars_alias": null, "prep_lot_number": "VT4359g", "prep_date": "2022-09-21", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT4360g.json b/scripts/Exaspim_ingest/tars_info/VT4360g.json new file mode 100644 index 00000000..4f13799d --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT4360g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "pAAV-7x-TRE-tDTomato", "tars_identifiers": {"virus_tars_id": "AiV300005", "plasmid_tars_alias": null, "prep_lot_number": "VT4360g", "prep_date": "2022-09-23", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT5048g.json b/scripts/Exaspim_ingest/tars_info/VT5048g.json new file mode 100644 index 00000000..5bdb8dfc --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT5048g.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "NA", "tars_identifiers": {"virus_tars_id": "AiV1791_PHPeB", "plasmid_tars_alias": null, "prep_lot_number": "VT5311C", "prep_date": "2023-03-08", "prep_type": "Crude", "prep_protocol": "PHPeB-SOP#VC004"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT5311C.json b/scripts/Exaspim_ingest/tars_info/VT5311C.json new file mode 100644 index 00000000..5bdb8dfc --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT5311C.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "NA", "tars_identifiers": {"virus_tars_id": "AiV1791_PHPeB", "plasmid_tars_alias": null, "prep_lot_number": "VT5311C", "prep_date": "2023-03-08", "prep_type": "Crude", "prep_protocol": "PHPeB-SOP#VC004"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT5316C.json b/scripts/Exaspim_ingest/tars_info/VT5316C.json new file mode 100644 index 00000000..5bdb8dfc --- /dev/null +++ b/scripts/Exaspim_ingest/tars_info/VT5316C.json @@ -0,0 +1 @@ +{"material_type": "Virus", "name": "NA", "tars_identifiers": {"virus_tars_id": "AiV1791_PHPeB", "plasmid_tars_alias": null, "prep_lot_number": "VT5311C", "prep_date": "2023-03-08", "prep_type": "Crude", "prep_protocol": "PHPeB-SOP#VC004"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file From 3a243bf760aa99b9747699fe4584b33a7e1b2fe2 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 16 May 2024 19:11:41 -0400 Subject: [PATCH 35/43] Update ingest_exaspim_materials.ipynb --- .../ingest_exaspim_materials.ipynb | 50 ++++++++++++++----- 1 file changed, 38 insertions(+), 12 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb index 7cc322ef..58916af8 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -4,7 +4,19 @@ "cell_type": "code", "execution_count": 1, "metadata": {}, - "outputs": [], + "outputs": [ + { + "ename": "ImportError", + "evalue": "cannot import name 'SpecimenProcedureTypes' from 'aind_data_schema_models.specimen_procedure_types' (c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\aind_data_schema_models\\specimen_procedure_types.py)", + "output_type": "error", + "traceback": [ + "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", + "\u001b[1;31mImportError\u001b[0m Traceback (most recent call last)", + "Cell \u001b[1;32mIn[1], line 12\u001b[0m\n\u001b[0;32m 8\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01mpathlib\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m Path\n\u001b[0;32m 10\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01maind_data_schema\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mcore\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mprocedures\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m SpecimenProcedure, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial, TarsVirusIdentifiers\n\u001b[1;32m---> 12\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01maind_data_schema_models\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mspecimen_procedure_types\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m SpecimenProcedureTypes\n\u001b[0;32m 14\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01maind_data_schema_models\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01morganizations\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m Organization\n\u001b[0;32m 16\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01maind_data_schema_models\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mpid_names\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m PIDName\n", + "\u001b[1;31mImportError\u001b[0m: cannot import name 'SpecimenProcedureTypes' from 'aind_data_schema_models.specimen_procedure_types' (c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\aind_data_schema_models\\specimen_procedure_types.py)" + ] + } + ], "source": [ "import pandas as pd\n", "import requests\n", @@ -15,13 +27,15 @@ "from enum import Enum\n", "from pathlib import Path\n", "\n", - "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial, TarsVirusIdentifiers\n", + "from aind_data_schema.core.procedures import SpecimenProcedure, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial, TarsVirusIdentifiers\n", "\n", - "from aind_data_schema.models.organizations import Organization\n", + "from aind_data_schema_models.specimen_procedure_types import SpecimenProcedureTypes\n", "\n", - "from aind_data_schema.models.pid_names import PIDName\n", + "from aind_data_schema_models.organizations import Organization\n", "\n", - "from aind_data_schema.models.registry import Registry\n", + "from aind_data_schema_models.pid_names import PIDName\n", + "\n", + "from aind_data_schema_models.registry import Registry\n", "\n", "import logging\n", "\n", @@ -32,7 +46,7 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": null, "metadata": {}, "outputs": [], "source": [ @@ -52,21 +66,33 @@ }, { "cell_type": "code", - "execution_count": 3, + "execution_count": null, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "{}\n" + "./original_spec_files\\576404_invalid.json\n", + "576404\n" + ] + }, + { + "ename": "NameError", + "evalue": "name 'materials_sheet' is not defined", + "output_type": "error", + "traceback": [ + "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", + "\u001b[1;31mNameError\u001b[0m Traceback (most recent call last)", + "Cell \u001b[1;32mIn[2], line 15\u001b[0m\n\u001b[0;32m 13\u001b[0m subj_id \u001b[38;5;241m=\u001b[39m file\u001b[38;5;241m.\u001b[39msplit(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;130;01m\\\\\u001b[39;00m\u001b[38;5;124m\"\u001b[39m)[\u001b[38;5;241m-\u001b[39m\u001b[38;5;241m1\u001b[39m]\u001b[38;5;241m.\u001b[39msplit(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m_\u001b[39m\u001b[38;5;124m\"\u001b[39m)[\u001b[38;5;241m0\u001b[39m]\n\u001b[0;32m 14\u001b[0m \u001b[38;5;28mprint\u001b[39m(subj_id)\n\u001b[1;32m---> 15\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28mint\u001b[39m(subj_id) \u001b[38;5;129;01mnot\u001b[39;00m \u001b[38;5;129;01min\u001b[39;00m materials_sheet[\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mMouse ID\u001b[39m\u001b[38;5;124m\"\u001b[39m]\u001b[38;5;241m.\u001b[39mtolist():\n\u001b[0;32m 16\u001b[0m \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mnot found\u001b[39m\u001b[38;5;124m\"\u001b[39m)\n\u001b[0;32m 17\u001b[0m \u001b[38;5;28;01mcontinue\u001b[39;00m\n", + "\u001b[1;31mNameError\u001b[0m: name 'materials_sheet' is not defined" ] } ], "source": [ "subj_procedures = {}\n", "\n", - "download_files = False\n", + "download_files = True\n", "\n", "files = glob.glob(\"./original_spec_files/*.json\")\n", "\n", @@ -124,7 +150,7 @@ }, { "cell_type": "code", - "execution_count": 4, + "execution_count": null, "metadata": {}, "outputs": [], "source": [ @@ -139,7 +165,7 @@ }, { "cell_type": "code", - "execution_count": 5, + "execution_count": null, "metadata": {}, "outputs": [], "source": [ @@ -266,7 +292,7 @@ }, { "cell_type": "code", - "execution_count": 6, + "execution_count": null, "metadata": {}, "outputs": [ { From b36e9d6854538d90dd2ae71c1eabf54a9c4b8ff7 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 16 May 2024 19:37:10 -0400 Subject: [PATCH 36/43] re-pulling assets --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 367 ++- .../ingest_exaspim_materials.ipynb | 2431 +++++++++++++++-- 2 files changed, 2506 insertions(+), 292 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index ec198182..5eb675ed 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -83,13 +83,16 @@ "from enum import Enum\n", "from pathlib import Path\n", "\n", - "from aind_data_schema.core.procedures import SpecimenProcedure, SpecimenProcedureType, ImmunolabelClass, HCRSeries, Antibody, Procedures\n", + "from aind_data_schema.core.procedures import SpecimenProcedure, ImmunolabelClass, HCRSeries, Antibody, Procedures\n", "\n", - "from aind_data_schema.models.organizations import Organization\n", + "from aind_data_schema_models.specimen_procedure_types import SpecimenProcedureType\n", "\n", - "from aind_data_schema.models.pid_names import PIDName\n", "\n", - "from aind_data_schema.models.registry import Registry\n", + "from aind_data_schema_models.organizations import Organization\n", + "\n", + "from aind_data_schema_models.pid_names import PIDName\n", + "\n", + "from aind_data_schema_models.registry import Registry\n", "\n", "\n", "sample_sheet = pd.read_excel(\"./ExM Sample Tracking.xlsx\", sheet_name=\"ExM Sample Tracking\", header=[0], converters={})\n", @@ -156,13 +159,50 @@ }, { "cell_type": "code", - "execution_count": 3, + "execution_count": 6, "metadata": {}, - "outputs": [], + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "576404\n", + "code: 200\n", + "609105\n", + "609105 model not found\n", + "609107\n", + "609107 model not found\n", + "609281\n", + "609281 model not found\n", + "614978\n", + "614978 model not found\n", + "614980\n", + "614980 model not found\n", + "615296\n", + "615296 model not found\n", + "603033\n", + "code: 200\n", + "618584\n", + "618584 model not found\n", + "146\n", + "620631\n", + "code: 200\n", + "620629\n", + "code: 200\n", + "648860\n", + "648860 model not found\n", + "648861\n", + "648861 model not found\n", + "648858\n", + "648858 model not found\n", + "648862\n" + ] + } + ], "source": [ "subj_procedures = {}\n", "\n", - "download_files = False\n", + "download_files = True\n", "\n", "\n", "if download_files:\n", @@ -179,7 +219,8 @@ " #TODO: check for invalid/missing models\n", "\n", " if request.status_code == 404 or request.status_code == 500:\n", - " print(f\"{sample_id} model not found\")\n", + " print(f\"{sample_id} model not found {request.status_code}\")\n", + "\n", " continue\n", "\n", " print(f\"code: {request.status_code}\")\n", @@ -359,8 +400,8 @@ "2022-11-22 00:00:00 2022-12-06 00:00:00 648862 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648862 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-09 00:00:00 2023-03-08 00:00:00 648077 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648077 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648077 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -368,8 +409,8 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-06 00:00:00 648079 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648079 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648079 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -804,8 +845,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674185 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674185 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674185 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -813,8 +854,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674191 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674191 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674191 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -858,7 +899,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674743', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-12-11 00:00:00 NaT 674743 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 674743 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 674743 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -866,14 +908,16 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-11-20 00:00:00 2023-11-20 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675061', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 675061 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 675061 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-08-09 00:00:00 2023-08-09 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-11-20 00:00:00 2023-11-20 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667354', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 667354 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 667354 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 667354 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -881,7 +925,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678116', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 678116 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 678116 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 678116 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -889,7 +934,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661293', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 661293 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 661293 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 661293 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -897,7 +943,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '663412', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-10 00:00:00 2023-12-14 00:00:00 663412 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 663412 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 663412 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -905,7 +952,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675057', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-10 00:00:00 2023-12-14 00:00:00 675057 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 675057 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 675057 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -913,7 +961,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664762', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 664762 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 664762 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 664762 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -921,7 +970,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667352', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 667352 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 667352 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 667352 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -929,7 +979,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670944', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 670944 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 670944 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 670944 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -937,7 +988,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670471', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-06 00:00:00 2023-11-08 00:00:00 670471 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670471 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670471 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -945,7 +997,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670339', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 670339 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670339 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670339 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -953,7 +1006,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670344', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 670344 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670344 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670344 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -961,7 +1015,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '681465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 681465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 681465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 681465 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -969,7 +1024,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '681469', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 681469 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 681469 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 681469 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -977,7 +1033,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '676009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 676009 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 676009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 676009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -985,7 +1042,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '676007', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 676007 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 676007 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 676007 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -993,7 +1051,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '671477', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 671477 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 671477 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 671477 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1001,7 +1060,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670808', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 670808 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670808 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670808 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1009,7 +1069,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670809', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 670809 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670809 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670809 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1017,7 +1078,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674741', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 674741 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 674741 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 674741 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1025,7 +1087,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659142', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 659142 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 659142 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 659142 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1033,7 +1096,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '663410', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 663410 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 663410 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 663410 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1041,7 +1105,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 673998 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 673998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 673998 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1049,7 +1114,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655147', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 655147 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 655147 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 655147 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1057,7 +1123,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 673996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 673996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 673996 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1065,7 +1132,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665083', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 665083 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 665083 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 665083 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1073,7 +1141,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652440', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 652440 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 652440 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 652440 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1081,7 +1150,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-10 00:00:00 2024-02-13 00:00:00 675375 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675375 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1089,7 +1159,8 @@ "2023-11-15 00:00:00 2023-11-15 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-10 00:00:00 2024-02-13 00:00:00 675374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1097,7 +1168,8 @@ "2023-11-15 00:00:00 2023-11-15 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675058', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675058 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675058 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "ORIGINAL SUBJ PROCEDURES: []\n", @@ -1116,14 +1188,16 @@ "2023-12-04 00:00:00 2023-12-04 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 655146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 655146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-12 00:00:00 2024-02-15 00:00:00 655145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 655145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 655145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1131,7 +1205,8 @@ "2023-12-04 00:00:00 2023-12-04 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '697837', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-12 00:00:00 2024-02-15 00:00:00 697837 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 697837 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 697837 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1139,7 +1214,8 @@ "2023-12-04 00:00:00 2023-12-04 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '697836', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-12 00:00:00 2024-03-12 00:00:00 697836 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 697836 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 697836 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1147,7 +1223,8 @@ "2023-12-04 00:00:00 2023-12-04 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '686955', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 686955 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 686955 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 686955 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1155,14 +1232,16 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 667998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 667998 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '686951', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 686951 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 686951 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 686951 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1170,7 +1249,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 667996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 667996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 667996 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1178,7 +1258,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '701772', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 701772 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 701772 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 701772 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1186,7 +1267,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673163', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 673163 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 673163 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 673163 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1194,7 +1276,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 659145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 659145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 659145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1202,7 +1285,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '701773', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 701773 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 701773 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 701773 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1210,7 +1294,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678794', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 678794 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 678794 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 678794 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1218,7 +1303,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 673161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 673161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 673161 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1226,7 +1312,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678112', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 678112 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 678112 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 678112 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1234,7 +1321,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667997', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 667997 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 667997 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 667997 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1242,7 +1330,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673157', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 673157 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 673157 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 673157 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1250,7 +1339,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708373', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708373 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708373 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1258,7 +1348,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708370', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708370 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708370 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1266,7 +1357,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1274,7 +1366,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708368', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708368 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708368 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1282,7 +1375,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708369', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708369 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708369 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1290,7 +1384,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708375 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708375 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1298,7 +1393,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708376', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708376 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708376 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1306,11 +1402,13 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '705161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-12 00:00:00 2024-02-11 00:00:00 705161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 705161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 705161 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '685221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 685221 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 685221 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 685221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1318,7 +1416,8 @@ "2024-01-25 00:00:00 2024-01-25 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-12 00:00:00 2024-02-12 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '685222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-11 00:00:00 NaT 685222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 685222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 685222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1326,7 +1425,8 @@ "2024-01-25 00:00:00 2024-01-25 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-12 00:00:00 2024-02-12 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '684101', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-11 00:00:00 NaT 684101 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 684101 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 684101 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1334,7 +1434,8 @@ "2024-01-25 00:00:00 2024-01-25 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-12 00:00:00 2024-02-12 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '684100', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 684100 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 684100 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 684100 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1342,7 +1443,8 @@ "2024-01-25 00:00:00 2024-01-25 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-12 00:00:00 2024-02-12 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708365', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 708365 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 708365 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 708365 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1350,7 +1452,8 @@ "2024-01-25 00:00:00 2024-01-25 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-12 00:00:00 2024-02-12 00:00:00 708365 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709393', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709393'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.7', 'animal_weight_post': '20.8', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '56.99999999999999733546474090', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709393'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.7', 'animal_weight_post': '20.8', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '56.99999999999999733546474090', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-15 00:00:00 NaT 709393 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709393 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709393 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1358,7 +1461,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 709393 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709394', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709394'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.1', 'animal_weight_post': '22.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709394'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.1', 'animal_weight_post': '22.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-15 00:00:00 NaT 709394 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709394 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709394 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1366,7 +1470,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-26 00:00:00 NaT 709222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1374,7 +1479,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-21 00:00:00 NaT 709221 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709221 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1382,7 +1488,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709220', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-26 00:00:00 NaT 709220 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709220 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709220 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1390,7 +1497,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-26 00:00:00 NaT 706434 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1398,7 +1506,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-15 00:00:00 NaT 706300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1406,7 +1515,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706301', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-21 00:00:00 NaT 706301 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706301 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706301 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1414,21 +1524,41 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703071', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703071 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703071 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-05 00:00:00 2024-02-05 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703066', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703066 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703066 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-05 00:00:00 2024-02-05 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703070', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-21 00:00:00 NaT 703070 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703070 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703070 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1436,7 +1566,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703067', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-15 00:00:00 NaT 703067 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703067 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703067 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1444,14 +1575,16 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709839', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709839 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709839 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-01 00:00:00 2024-03-01 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-03-18 00:00:00 2024-03-18 00:00:00 709839 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709013', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'rgAAV-Syn-FLEX-2xTRE-tTA', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 47500000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709013'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.0', 'animal_weight_post': '20.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '6.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'rgAAV-Syn-FLEX-2xTRE-tTA', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 47500000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709013'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.0', 'animal_weight_post': '20.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '6.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-04 00:00:00 NaT 709013 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709013 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709013 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1459,14 +1592,16 @@ "2024-02-23 00:00:00 2024-02-23 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-11 00:00:00 2024-03-11 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709838', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709838 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709838 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-01 00:00:00 2024-03-01 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-03-18 00:00:00 2024-03-18 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704523', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-04 00:00:00 NaT 704523 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704523 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704523 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1474,7 +1609,8 @@ "2024-02-23 00:00:00 2024-02-23 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-11 00:00:00 2024-03-11 00:00:00 704523 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '713601', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713601'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.7', 'animal_weight_post': '21.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713601'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.7', 'animal_weight_post': '21.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-04 00:00:00 NaT 713601 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 713601 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 713601 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1482,21 +1618,24 @@ "2024-02-23 00:00:00 2024-02-23 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-11 00:00:00 2024-03-11 00:00:00 713601 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '713600', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713600'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-08', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.3'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713600'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-08', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.3'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 713600 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 713600 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-23 00:00:00 2024-02-23 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-03-18 00:00:00 2024-03-18 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704521', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704521 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704521 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-01 00:00:00 2024-03-01 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-03-18 00:00:00 2024-03-18 00:00:00 704521 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709203', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709203'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.3', 'animal_weight_post': '20.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAVrg-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 75000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-TRE-DIO-GFP-IRES-tTA Supernova', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709203'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.3', 'animal_weight_post': '20.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-04 00:00:00 NaT 709203 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709203 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709203 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1504,14 +1643,16 @@ "2024-02-23 00:00:00 2024-02-23 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-11 00:00:00 2024-03-11 00:00:00 709203 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709016', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'rgAAV-Syn-FLEX-2xTRE-tTA', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 47500000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709016'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.4', 'animal_weight_post': '15.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'rgAAV-Syn-FLEX-2xTRE-tTA', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 47500000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709016'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.4', 'animal_weight_post': '15.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709016 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709016 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-01 00:00:00 2024-03-01 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-03-18 00:00:00 2024-03-18 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704522', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-04 00:00:00 NaT 704522 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704522 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704522 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1519,42 +1660,50 @@ "2024-03-01 00:00:00 2024-03-01 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-11 00:00:00 2024-03-11 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '715347', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 715347 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 715347 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 715347 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '719652', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 719652 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 719652 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 719652 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '719654', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 719654 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 719654 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 719654 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '715345', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 715345 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 715345 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 715345 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '717445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 717445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 717445 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 717445 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '717444', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 717444 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 717444 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 717444 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '712228', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 712228 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 712228 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 712228 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'rgAAV-Syn-FLEX-2xTRE-tTA', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 47500000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'rgAAV-Syn-FLEX-2xTRE-tTA', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 47500000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 709011 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 709011 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", @@ -1597,7 +1746,7 @@ "2024-04-03 00:00:00 NaT 683790 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 717612 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "{'Abcam', 'Sicgen', 'Invitrogen', 'Thermo Fisher', 'Jackson Immuno'}\n" + "{'Sicgen', 'Abcam', 'Thermo Fisher', 'Invitrogen', 'Jackson Immuno'}\n" ] } ], diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb index 58916af8..e134dea2 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -4,19 +4,7 @@ "cell_type": "code", "execution_count": 1, "metadata": {}, - "outputs": [ - { - "ename": "ImportError", - "evalue": "cannot import name 'SpecimenProcedureTypes' from 'aind_data_schema_models.specimen_procedure_types' (c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\aind_data_schema_models\\specimen_procedure_types.py)", - "output_type": "error", - "traceback": [ - "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", - "\u001b[1;31mImportError\u001b[0m Traceback (most recent call last)", - "Cell \u001b[1;32mIn[1], line 12\u001b[0m\n\u001b[0;32m 8\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01mpathlib\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m Path\n\u001b[0;32m 10\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01maind_data_schema\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mcore\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mprocedures\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m SpecimenProcedure, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial, TarsVirusIdentifiers\n\u001b[1;32m---> 12\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01maind_data_schema_models\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mspecimen_procedure_types\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m SpecimenProcedureTypes\n\u001b[0;32m 14\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01maind_data_schema_models\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01morganizations\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m Organization\n\u001b[0;32m 16\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01maind_data_schema_models\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mpid_names\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m PIDName\n", - "\u001b[1;31mImportError\u001b[0m: cannot import name 'SpecimenProcedureTypes' from 'aind_data_schema_models.specimen_procedure_types' (c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\aind_data_schema_models\\specimen_procedure_types.py)" - ] - } - ], + "outputs": [], "source": [ "import pandas as pd\n", "import requests\n", @@ -29,7 +17,7 @@ "\n", "from aind_data_schema.core.procedures import SpecimenProcedure, ImmunolabelClass, HCRSeries, Antibody, Procedures, ViralMaterial, TarsVirusIdentifiers\n", "\n", - "from aind_data_schema_models.specimen_procedure_types import SpecimenProcedureTypes\n", + "from aind_data_schema_models.specimen_procedure_types import SpecimenProcedureType\n", "\n", "from aind_data_schema_models.organizations import Organization\n", "\n", @@ -46,7 +34,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 2, "metadata": {}, "outputs": [], "source": [ @@ -66,7 +54,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 3, "metadata": {}, "outputs": [ { @@ -74,25 +62,1140 @@ "output_type": "stream", "text": [ "./original_spec_files\\576404_invalid.json\n", - "576404\n" - ] - }, - { - "ename": "NameError", - "evalue": "name 'materials_sheet' is not defined", - "output_type": "error", - "traceback": [ - "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", - "\u001b[1;31mNameError\u001b[0m Traceback (most recent call last)", - "Cell \u001b[1;32mIn[2], line 15\u001b[0m\n\u001b[0;32m 13\u001b[0m subj_id \u001b[38;5;241m=\u001b[39m file\u001b[38;5;241m.\u001b[39msplit(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;130;01m\\\\\u001b[39;00m\u001b[38;5;124m\"\u001b[39m)[\u001b[38;5;241m-\u001b[39m\u001b[38;5;241m1\u001b[39m]\u001b[38;5;241m.\u001b[39msplit(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m_\u001b[39m\u001b[38;5;124m\"\u001b[39m)[\u001b[38;5;241m0\u001b[39m]\n\u001b[0;32m 14\u001b[0m \u001b[38;5;28mprint\u001b[39m(subj_id)\n\u001b[1;32m---> 15\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28mint\u001b[39m(subj_id) \u001b[38;5;129;01mnot\u001b[39;00m \u001b[38;5;129;01min\u001b[39;00m materials_sheet[\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mMouse ID\u001b[39m\u001b[38;5;124m\"\u001b[39m]\u001b[38;5;241m.\u001b[39mtolist():\n\u001b[0;32m 16\u001b[0m \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mnot found\u001b[39m\u001b[38;5;124m\"\u001b[39m)\n\u001b[0;32m 17\u001b[0m \u001b[38;5;28;01mcontinue\u001b[39;00m\n", - "\u001b[1;31mNameError\u001b[0m: name 'materials_sheet' is not defined" + "576404\n", + "not found\n", + "./original_spec_files\\603033_invalid.json\n", + "603033\n", + "nan\n", + "nan\n", + "nan\n", + "./original_spec_files\\609105_invalid.json\n", + "609105\n", + "nan\n", + "nan\n", + "nan\n", + "./original_spec_files\\609107_invalid.json\n", + "609107\n", + "nan\n", + "nan\n", + "nan\n", + "./original_spec_files\\609281_invalid.json\n", + "609281\n", + "nan\n", + "nan\n", + "nan\n", + "./original_spec_files\\613814_invalid.json\n", + "613814\n", + "nan\n", + "nan\n", + "nan\n", + "./original_spec_files\\614978_invalid.json\n", + "614978\n", + "nan\n", + "nan\n", + "nan\n", + "./original_spec_files\\614980_invalid.json\n", + "614980\n", + "nan\n", + "nan\n", + "nan\n", + "./original_spec_files\\615296_invalid.json\n", + "615296\n", + "nan\n", + "nan\n", + "nan\n", + "./original_spec_files\\618583_invalid.json\n", + "618583\n", + "nan\n", + "nan\n", + "nan\n", + 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found\n", + "VT3212g\n", + "VT3212g model not found\n", + "./original_spec_files\\713600_invalid.json\n", + "713600\n", + "221118-11\n", + "221118-11 model not found\n", + "221118-11\n", + "221118-11 model not found\n", + "VT4636g\n", + "VT4636g model not found\n", + "./original_spec_files\\713601_invalid.json\n", + "713601\n", + "221118-11\n", + "221118-11 model not found\n", + "221118-11\n", + "221118-11 model not found\n", + "VT4635g\n", + "VT4635g model not found\n", + "./original_spec_files\\715345_invalid.json\n", + "715345\n", + "GT232C\n", + "code: 200\n", + "VT3214g\n", + "code: 200\n", + "VT6173g\n", + "VT6173g model not found\n", + "./original_spec_files\\715347_invalid.json\n", + "715347\n", + "GT232C\n", + "GT232C model not found\n", + "VT3214g\n", + "VT3214g model not found\n", + "VT6173g\n", + "VT6173g model not found\n", + "./original_spec_files\\717444_invalid.json\n", + "717444\n", + "GT250C\n", + "code: 200\n", + "VT3214g\n", + "code: 200\n", + "VT3212g\n", + "code: 200\n", + "./original_spec_files\\717445_invalid.json\n", + "717445\n", + "GT250C\n", + "code: 200\n", + "VT3214g\n", + "code: 200\n", + "VT3212g\n", + "code: 200\n", + "./original_spec_files\\719652_invalid.json\n", + "719652\n", + "VT5317c\n", + "VT5317c model not found\n", + "VT3214g\n", + "VT3214g model not found\n", + "VT6173g\n", + "VT6173g model not found\n", + "./original_spec_files\\719654_invalid.json\n", + "719654\n", + "VT5317c\n", + "VT5317c model not found\n", + "VT3214g\n", + "VT3214g model not found\n", + "VT6173g\n", + "VT6173g model not found\n", + "{'VT3214g': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3212g': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3216g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3215g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3213g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4360g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4299g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4359g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'v162851': {'material_type': 'Virus', 'name': 'pAAV-CAG-FLEX-tdTomato Addgene 28306-PHPeB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5316C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4358g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5048g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5311C': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4300g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5046g': {'material_type': 'Virus', 'name': 'VT6181g', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5047g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5353g': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5415g': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5315C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'GT254C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5598C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT6181g': {'material_type': 'Virus', 'name': 'VT6181g', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, '221118-11': {'material_type': 'Virus', 'name': 'AAV-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'GT232C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'GT250C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}}\n" ] } ], "source": [ "subj_procedures = {}\n", "\n", - "download_files = True\n", + "download_files = False\n", "\n", "files = glob.glob(\"./original_spec_files/*.json\")\n", "\n", @@ -150,7 +1253,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 4, "metadata": {}, "outputs": [], "source": [ @@ -165,7 +1268,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 5, "metadata": {}, "outputs": [], "source": [ @@ -292,7 +1395,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 6, "metadata": {}, "outputs": [ { @@ -436,7 +1539,97 @@ "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648699' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -537,72 +1730,40 @@ "\n", "\n", "{'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652440', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652440' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652441' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", - "\n" + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652445' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652779' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -645,7 +1806,6 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -653,7 +1813,6 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -669,12 +1828,6 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", @@ -691,21 +1844,6 @@ "name": "stdout", "output_type": "stream", "text": [ - "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652445' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652779' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652781' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -778,6 +1916,27 @@ "\n", "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='655145' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='655146' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655147', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='655147' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='657676' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -794,6 +1953,20 @@ "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658735' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659142', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='659142' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='659145' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='659146' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -806,47 +1979,160 @@ "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660627' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660630' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660949' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660950' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='661300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='664761' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665081' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660630' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660949' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660950' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661293', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='661293' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='661300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '663410', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='663410' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '663412', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='663412' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='664761' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664762', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='664762' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665081' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665082' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}] specimen_procedures=[] notes=None\n", @@ -855,6 +2141,13 @@ "\n", "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665083', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665083' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -869,12 +2162,132 @@ "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667352', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667352' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667354', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667354' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667857' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", - "\n" + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667996' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667997', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667997' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667998' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='668294' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669973' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669977' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670339', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670339' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670344', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670344' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670471', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670471' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670808', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670808' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670809', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670809' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670944', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670944' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '671477', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='671477' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673157', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673157' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673161' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673163', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673163' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673996' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673998' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998']}], 'notes': None}\n" ] }, { @@ -911,6 +2324,19 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -938,6 +2364,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -977,6 +2404,13 @@ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n" ] }, @@ -984,24 +2418,6 @@ "name": "stdout", "output_type": "stream", "text": [ - "{'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='668294' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669973' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669977' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674184' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -1030,18 +2446,667 @@ "\n", "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}\n", - "[]\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674741', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674741' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674743', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674743' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675057', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675057' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675058', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675058' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675061', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675061' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675374' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675375' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '676007', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='676007' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '676009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='676009' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678112', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='678112' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678116', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='678116' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678794', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='678794' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '681465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='681465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '681469', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='681469' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '684100', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='684100' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '684101', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='684101' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '685221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='685221' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '685222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='685222' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '686951', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='686951' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '686955', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='686955' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '697836', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='697836' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '697837', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='697837' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '701772', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='701772' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '701773', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='701773' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703066', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='703066' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703067', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='703067' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703070', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='703070' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703071', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='703071' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704521', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='704521' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704522', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='704522' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704523', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='704523' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '705161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='705161' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='706300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706301', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='706301' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='706434' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708365', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708365' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708368', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708368' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368']}], 'notes': None}\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708369', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708369' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708370', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708370' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708373', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708373' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708374' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708375' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708376', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708376' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709011']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709011' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709011']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709011']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709013', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709013']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.0', 'animal_weight_post': '20.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '6.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709013' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709013']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.0', 'animal_weight_post': '20.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '6.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709013']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.0', 'animal_weight_post': '20.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '6.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709016', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709016']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.4', 'animal_weight_post': '15.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709016' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709016']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.4', 'animal_weight_post': '15.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709016']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.4', 'animal_weight_post': '15.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709203', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709203']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.3', 'animal_weight_post': '20.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709203' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709203']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.3', 'animal_weight_post': '20.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709203']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.3', 'animal_weight_post': '20.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709220', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709220' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709221' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709222' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709393', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709393']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.7', 'animal_weight_post': '20.8', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '56.99999999999999733546474090', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709393' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709393']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.7', 'animal_weight_post': '20.8', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '56.99999999999999733546474090', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709393']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.7', 'animal_weight_post': '20.8', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '56.99999999999999733546474090', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709394', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709394']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.1', 'animal_weight_post': '22.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709394' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709394']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.1', 'animal_weight_post': '22.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709394']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.1', 'animal_weight_post': '22.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709838', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709838' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709839', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709839' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '712228', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='712228' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '713600', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713600']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-08', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.3'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='713600' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713600']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-08', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.3'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713600']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-08', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.3'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '713601', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713601']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.7', 'animal_weight_post': '21.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='713601' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713601']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.7', 'animal_weight_post': '21.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713601']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.7', 'animal_weight_post': '21.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '715345', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='715345' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '715347', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='715347' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '717444', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='717444' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '717445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='717445' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '719652', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='719652' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652']}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '719654', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='719654' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654']}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654']}], 'notes': None}\n", + "[]\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", From d8ee1ead6df5dbf285eb0bedb1f6934cdfdfb95a Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 16 May 2024 19:38:26 -0400 Subject: [PATCH 37/43] Update ingest_exaspim.ipynb --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 378 +++++++++++++++++++- 1 file changed, 365 insertions(+), 13 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index 5eb675ed..a461b3ff 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -159,7 +159,7 @@ }, { "cell_type": "code", - "execution_count": 6, + "execution_count": 3, "metadata": {}, "outputs": [ { @@ -169,33 +169,385 @@ "576404\n", "code: 200\n", "609105\n", - "609105 model not found\n", + "609105 model not found 500\n", "609107\n", - "609107 model not found\n", + "609107 model not found 500\n", "609281\n", - "609281 model not found\n", + "609281 model not found 500\n", "614978\n", - "614978 model not found\n", + "614978 model not found 500\n", "614980\n", - "614980 model not found\n", + "614980 model not found 500\n", "615296\n", - "615296 model not found\n", + "615296 model not found 500\n", "603033\n", - "code: 200\n", + "code: 207\n", "618584\n", - "618584 model not found\n", + "618584 model not found 500\n", "146\n", "620631\n", "code: 200\n", "620629\n", "code: 200\n", "648860\n", - "648860 model not found\n", + "648860 model not found 500\n", "648861\n", - "648861 model not found\n", + "648861 model not found 500\n", "648858\n", - "648858 model not found\n", - "648862\n" + "648858 model not found 500\n", + "648862\n", + "648862 model not found 500\n", + "648077\n", + "648077 model not found 500\n", + "648079\n", + "648079 model not found 500\n", + "648698\n", + "648698 model not found 500\n", + "648699\n", + "648699 model not found 500\n", + "648700\n", + "648700 model not found 500\n", + "648696\n", + "648696 model not found 500\n", + "648695\n", + "648695 model not found 500\n", + "648697\n", + "648697 model not found 500\n", + "651324\n", + "code: 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+ "code: 406\n", + "681465\n", + "code: 406\n", + "681469\n", + "code: 406\n", + "676009\n", + "code: 406\n", + "676007\n", + "code: 406\n", + "671477\n", + "671477 model not found 500\n", + "670808\n", + "670808 model not found 500\n", + "670809\n", + "670809 model not found 500\n", + "674741\n", + "674741 model not found 500\n", + "659142\n", + "659142 model not found 500\n", + "663410\n", + "663410 model not found 500\n", + "673998\n", + "code: 200\n", + "655147\n", + "655147 model not found 500\n", + "673996\n", + "code: 200\n", + "665083\n", + "665083 model not found 500\n", + "652440\n", + "652440 model not found 500\n", + "397\n", + "675375\n", + "675375 model not found 500\n", + "675374\n", + "675374 model not found 500\n", + "675058\n", + "675058 model not found 500\n", + "109_11\n", + "109_11 model not found 404\n", + "109_03\n", + "109_03 model not found 404\n", + "655146\n", + "655146 model not found 500\n", + "655145\n", + "655145 model not found 500\n", + "697837\n", + 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+ "709838 model not found 500\n", + "704523\n", + "704523 model not found 500\n", + "713601\n", + "713601 model not found 500\n", + "713600\n", + "713600 model not found 500\n", + "704521\n", + "704521 model not found 500\n", + "709203\n", + "709203 model not found 500\n", + "709016\n", + "709016 model not found 500\n", + "704522\n", + "704522 model not found 500\n", + "715347\n", + "715347 model not found 500\n", + "719652\n", + "719652 model not found 500\n", + "719654\n", + "719654 model not found 500\n", + "715345\n", + "715345 model not found 500\n", + "717445\n", + "717445 model not found 500\n", + "717444\n", + "717444 model not found 500\n", + "712228\n", + "code: 406\n", + "709011\n", + "709011 model not found 500\n", + "709014\n", + "709014 model not found 500\n", + "717443\n", + "717443 model not found 500\n", + "715346\n", + "715346 model not found 500\n", + "712226\n", + "code: 406\n", + "718162\n", + "718162 model not found 500\n", + "718168\n", + "718168 model not found 500\n", + "683791\n", + "683791 model not found 500\n", + "720165\n", + "720165 model not found 500\n", + "717614\n", + "717614 model not found 500\n", + "721056\n", + "721056 model not found 500\n", + "719179\n", + "719179 model not found 500\n", + "721059\n", + "721059 model not found 500\n", + "717984\n", + "717984 model not found 500\n", + "720164\n", + "720164 model not found 500\n", + "683790\n", + "683790 model not found 500\n", + "717612\n", + "717612 model not found 500\n" ] } ], From cb9fa3f6394e724cc6e6b7aacbc627545b9e33cb Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Fri, 17 May 2024 15:48:35 -0400 Subject: [PATCH 38/43] Proper tars IDs --- scripts/Exaspim_ingest/tars_info/VT3213g.json | 2 +- scripts/Exaspim_ingest/tars_info/VT3214g.json | 2 +- scripts/Exaspim_ingest/tars_info/VT3215g.json | 2 +- scripts/Exaspim_ingest/tars_info/VT3216g.json | 2 +- scripts/Exaspim_ingest/tars_info/VT4358g.json | 2 +- scripts/Exaspim_ingest/tars_info/VT5048g.json | 2 +- scripts/Exaspim_ingest/tars_info/VT5316C.json | 2 +- 7 files changed, 7 insertions(+), 7 deletions(-) diff --git a/scripts/Exaspim_ingest/tars_info/VT3213g.json b/scripts/Exaspim_ingest/tars_info/VT3213g.json index 4f13799d..01a69d4c 100644 --- a/scripts/Exaspim_ingest/tars_info/VT3213g.json +++ b/scripts/Exaspim_ingest/tars_info/VT3213g.json @@ -1 +1 @@ -{"material_type": "Virus", "name": "pAAV-7x-TRE-tDTomato", "tars_identifiers": {"virus_tars_id": "AiV300005", "plasmid_tars_alias": null, "prep_lot_number": "VT4360g", "prep_date": "2022-09-23", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file +{"material_type": "Virus", "name": "pAAV-7x-TRE-3x-eGFP", "tars_identifiers": {"virus_tars_id": "AiV300021", "plasmid_tars_alias": null, "prep_lot_number": "VT3213g", "prep_date": "2022-02-04", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT3214g.json b/scripts/Exaspim_ingest/tars_info/VT3214g.json index 282bf6b5..8ab7ade6 100644 --- a/scripts/Exaspim_ingest/tars_info/VT3214g.json +++ b/scripts/Exaspim_ingest/tars_info/VT3214g.json @@ -1 +1 @@ -{"material_type": "Virus", "name": "pAAV-7x-TRE-3x-eGFP", "tars_identifiers": {"virus_tars_id": "AiV300002", "plasmid_tars_alias": null, "prep_lot_number": "VT4359g", "prep_date": "2022-09-21", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file +{"material_type": "Virus", "name": "pAAV-Syn-Flex-TREx2-tTA", "tars_identifiers": {"virus_tars_id": "AiV300024", "plasmid_tars_alias": null, "prep_lot_number": "VT3214g", "prep_date": "2023-02-04", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT3215g.json b/scripts/Exaspim_ingest/tars_info/VT3215g.json index 4f13799d..2d2675dc 100644 --- a/scripts/Exaspim_ingest/tars_info/VT3215g.json +++ b/scripts/Exaspim_ingest/tars_info/VT3215g.json @@ -1 +1 @@ -{"material_type": "Virus", "name": "pAAV-7x-TRE-tDTomato", "tars_identifiers": {"virus_tars_id": "AiV300005", "plasmid_tars_alias": null, "prep_lot_number": "VT4360g", "prep_date": "2022-09-23", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file +{"material_type": "Virus", "name": "pAAV-7x-TRE-tDTomato", "tars_identifiers": {"virus_tars_id": "AiV300023", "plasmid_tars_alias": null, "prep_lot_number": "VT3215g", "prep_date": "2023-02-04", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT3216g.json b/scripts/Exaspim_ingest/tars_info/VT3216g.json index 01a69d4c..345be5eb 100644 --- a/scripts/Exaspim_ingest/tars_info/VT3216g.json +++ b/scripts/Exaspim_ingest/tars_info/VT3216g.json @@ -1 +1 @@ -{"material_type": "Virus", "name": "pAAV-7x-TRE-3x-eGFP", "tars_identifiers": {"virus_tars_id": "AiV300021", "plasmid_tars_alias": null, "prep_lot_number": "VT3213g", "prep_date": "2022-02-04", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file +{"material_type": "Virus", "name": "pAAV-7x-TRE-tDTomato", "tars_identifiers": {"virus_tars_id": "AiV300007", "plasmid_tars_alias": null, "prep_lot_number": "VT3216g", "prep_date": "2022-02-04", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT4358g.json b/scripts/Exaspim_ingest/tars_info/VT4358g.json index 5bdb8dfc..8dcdd7e6 100644 --- a/scripts/Exaspim_ingest/tars_info/VT4358g.json +++ b/scripts/Exaspim_ingest/tars_info/VT4358g.json @@ -1 +1 @@ -{"material_type": "Virus", "name": "NA", "tars_identifiers": {"virus_tars_id": "AiV1791_PHPeB", "plasmid_tars_alias": null, "prep_lot_number": "VT5311C", "prep_date": "2023-03-08", "prep_type": "Crude", "prep_protocol": "PHPeB-SOP#VC004"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file +{"material_type": "Virus", "name": "pAAV-Syn-Flex-TREx2-tTA", "tars_identifiers": {"virus_tars_id": "AiV300000", "plasmid_tars_alias": null, "prep_lot_number": "VT4358g", "prep_date": "2022-09-23", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT5048g.json b/scripts/Exaspim_ingest/tars_info/VT5048g.json index 5bdb8dfc..3a255df6 100644 --- a/scripts/Exaspim_ingest/tars_info/VT5048g.json +++ b/scripts/Exaspim_ingest/tars_info/VT5048g.json @@ -1 +1 @@ -{"material_type": "Virus", "name": "NA", "tars_identifiers": {"virus_tars_id": "AiV1791_PHPeB", "plasmid_tars_alias": null, "prep_lot_number": "VT5311C", "prep_date": "2023-03-08", "prep_type": "Crude", "prep_protocol": "PHPeB-SOP#VC004"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file +{"material_type": "Virus", "name": "pAAV-7x-TRE-tDTomato", "tars_identifiers": {"virus_tars_id": "AiV300008", "plasmid_tars_alias": null, "prep_lot_number": "VT5048g", "prep_date": "2023-02-07", "prep_type": "Purified", "prep_protocol": "SOP#VC003"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file diff --git a/scripts/Exaspim_ingest/tars_info/VT5316C.json b/scripts/Exaspim_ingest/tars_info/VT5316C.json index 5bdb8dfc..26930951 100644 --- a/scripts/Exaspim_ingest/tars_info/VT5316C.json +++ b/scripts/Exaspim_ingest/tars_info/VT5316C.json @@ -1 +1 @@ -{"material_type": "Virus", "name": "NA", "tars_identifiers": {"virus_tars_id": "AiV1791_PHPeB", "plasmid_tars_alias": null, "prep_lot_number": "VT5311C", "prep_date": "2023-03-08", "prep_type": "Crude", "prep_protocol": "PHPeB-SOP#VC004"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file +{"material_type": "Virus", "name": "NA", "tars_identifiers": {"virus_tars_id": "AiV1837_PHPeB", "plasmid_tars_alias": null, "prep_lot_number": "VT5316C", "prep_date": "2023-03-08", "prep_type": "Crude", "prep_protocol": "PHPeB-SOP#VC004"}, "addgene_id": null, "titer": null, "titer_unit": "gc/mL"} \ No newline at end of file From a84d0b9aa607b0039fb7bb367a4434dc8097fe4a Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Fri, 17 May 2024 15:55:08 -0400 Subject: [PATCH 39/43] properly import tars IDs --- .../ingest_exaspim_materials.ipynb | 2181 +++++++++-------- 1 file changed, 1147 insertions(+), 1034 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb index e134dea2..a7323fdc 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim_materials.ipynb @@ -61,9 +61,17 @@ "name": "stdout", "output_type": "stream", "text": [ + "./original_spec_files\\576404.json\n", + "576404\n", + "not found\n", "./original_spec_files\\576404_invalid.json\n", "576404\n", "not found\n", + "./original_spec_files\\603033.json\n", + "603033\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\603033_invalid.json\n", "603033\n", "nan\n", @@ -114,11 +122,21 @@ "nan\n", "nan\n", "nan\n", + "./original_spec_files\\620629.json\n", + "620629\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\620629_invalid.json\n", "620629\n", "nan\n", "nan\n", "nan\n", + "./original_spec_files\\620631.json\n", + "620631\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\620631_invalid.json\n", "620631\n", "nan\n", @@ -134,128 +152,94 @@ "./original_spec_files\\648079_invalid.json\n", "648079\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648434_invalid.json\n", "648434\n", "VT3214g\n", - "code: 200\n", "VT3216g\n", "code: 200\n", "nan\n", "./original_spec_files\\648435_invalid.json\n", "648435\n", "VT3214g\n", - "code: 200\n", "VT3216g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648436_invalid.json\n", "648436\n", "VT3214g\n", - "code: 200\n", "VT3216g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648695_invalid.json\n", "648695\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", "code: 200\n", "nan\n", "./original_spec_files\\648696_invalid.json\n", "648696\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648697_invalid.json\n", "648697\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648698_invalid.json\n", "648698\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648699_invalid.json\n", "648699\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648700_invalid.json\n", "648700\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648858_invalid.json\n", "648858\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648860_invalid.json\n", "648860\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648861_invalid.json\n", "648861\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\648862_invalid.json\n", "648862\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\650008_invalid.json\n", "650008\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\650009_invalid.json\n", "650009\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\650010_invalid.json\n", "650010\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\650011_invalid.json\n", "650011\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\650819_invalid.json\n", "650819\n", @@ -265,15 +249,23 @@ "./original_spec_files\\651305_invalid.json\n", "651305\n", "VT3214g\n", - "code: 200\n", "VT3216g\n", - "code: 200\n", + "nan\n", + "./original_spec_files\\651324.json\n", + "651324\n", + "nan\n", + "nan\n", "nan\n", "./original_spec_files\\651324_invalid.json\n", "651324\n", "nan\n", "nan\n", "nan\n", + "./original_spec_files\\651327.json\n", + "651327\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\651327_invalid.json\n", "651327\n", "nan\n", @@ -282,155 +274,138 @@ "./original_spec_files\\651895_invalid.json\n", "651895\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", "code: 200\n", "nan\n", "./original_spec_files\\651897_invalid.json\n", "651897\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\652440_invalid.json\n", "652440\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\652441_invalid.json\n", "652441\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\652445_invalid.json\n", "652445\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\652779_invalid.json\n", "652779\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\652781_invalid.json\n", "652781\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\653153_invalid.json\n", "653153\n", "VT3214g\n", - "code: 200\n", "VT3216g\n", - "code: 200\n", "nan\n", "./original_spec_files\\653158_invalid.json\n", "653158\n", "VT3214g\n", - "code: 200\n", "VT3216g\n", - "code: 200\n", "nan\n", "./original_spec_files\\653159_invalid.json\n", "653159\n", "VT3214g\n", - "code: 200\n", "VT3216g\n", - "code: 200\n", "nan\n", + "./original_spec_files\\653430.json\n", + "653430\n", + "not found\n", "./original_spec_files\\653430_invalid.json\n", "653430\n", "not found\n", + "./original_spec_files\\653431.json\n", + "653431\n", + "not found\n", "./original_spec_files\\653431_invalid.json\n", "653431\n", "not found\n", + "./original_spec_files\\653432.json\n", + "653432\n", + "not found\n", "./original_spec_files\\653432_invalid.json\n", "653432\n", "not found\n", "./original_spec_files\\653980_invalid.json\n", "653980\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\653981_invalid.json\n", "653981\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\654306_invalid.json\n", "654306\n", "VT3214g\n", - "code: 200\n", "VT4360g\n", "code: 200\n", "nan\n", "./original_spec_files\\654308_invalid.json\n", "654308\n", "VT3214g\n", - "code: 200\n", "VT4360g\n", - "code: 200\n", "nan\n", "./original_spec_files\\654727_invalid.json\n", "654727\n", "VT3214g\n", - "code: 200\n", "VT3215g\n", - "code: 200\n", "nan\n", "./original_spec_files\\655145_invalid.json\n", "655145\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\655146_invalid.json\n", "655146\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\655147_invalid.json\n", "655147\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\657676_invalid.json\n", "657676\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\658733_invalid.json\n", "658733\n", "nan\n", "nan\n", "nan\n", + "./original_spec_files\\658734.json\n", + "658734\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\658734_invalid.json\n", "658734\n", "nan\n", "nan\n", "nan\n", + "./original_spec_files\\658735.json\n", + "658735\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\658735_invalid.json\n", "658735\n", "nan\n", @@ -439,39 +414,53 @@ "./original_spec_files\\659142_invalid.json\n", "659142\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\659145_invalid.json\n", "659145\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\659146_invalid.json\n", "659146\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", + "nan\n", + "./original_spec_files\\660625.json\n", + "660625\n", + "nan\n", + "nan\n", "nan\n", "./original_spec_files\\660625_invalid.json\n", "660625\n", "nan\n", "nan\n", "nan\n", + "./original_spec_files\\660627.json\n", + "660627\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\660627_invalid.json\n", "660627\n", "nan\n", "nan\n", "nan\n", + "./original_spec_files\\660629.json\n", + "660629\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\660629_invalid.json\n", "660629\n", "nan\n", "nan\n", "nan\n", + "./original_spec_files\\660630.json\n", + "660630\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\660630_invalid.json\n", "660630\n", "nan\n", @@ -480,136 +469,107 @@ "./original_spec_files\\660949_invalid.json\n", "660949\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\660950_invalid.json\n", "660950\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\661293_invalid.json\n", "661293\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\661300_invalid.json\n", "661300\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\663410_invalid.json\n", "663410\n", "VT3214g\n", - "code: 200\n", "VT4360g\n", - "code: 200\n", "nan\n", "./original_spec_files\\663412_invalid.json\n", "663412\n", "VT3214g\n", - "code: 200\n", "VT4360g\n", - "code: 200\n", "nan\n", "./original_spec_files\\664761_invalid.json\n", "664761\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\664762_invalid.json\n", "664762\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\665081_invalid.json\n", "665081\n", "VT3214g\n", - "code: 200\n", "VT4360g\n", - "code: 200\n", "nan\n", "./original_spec_files\\665082_invalid.json\n", "665082\n", "VT3214g\n", - "code: 200\n", "VT4360g\n", - "code: 200\n", "nan\n", "./original_spec_files\\665083_invalid.json\n", "665083\n", "VT3214g\n", - "code: 200\n", "VT4360g\n", - "code: 200\n", "nan\n", "./original_spec_files\\665465_invalid.json\n", "665465\n", "VT3214g\n", - "code: 200\n", "VT4360g\n", - "code: 200\n", "nan\n", "./original_spec_files\\665470_invalid.json\n", "665470\n", "VT3214g\n", - "code: 200\n", "VT3213g\n", - "code: 200\n", "nan\n", "./original_spec_files\\667352_invalid.json\n", "667352\n", "VT3214g\n", - "code: 200\n", "VT4299g\n", "code: 200\n", "nan\n", "./original_spec_files\\667354_invalid.json\n", "667354\n", "VT3214g\n", - "code: 200\n", "VT4299g\n", - "code: 200\n", "nan\n", "./original_spec_files\\667857_invalid.json\n", "667857\n", "VT3214g\n", - "code: 200\n", "VT4299g\n", - "code: 200\n", "nan\n", "./original_spec_files\\667996_invalid.json\n", "667996\n", "VT3214g\n", - "code: 200\n", "VT4359G\n", "VT4359G model not found\n", "nan\n", "./original_spec_files\\667997_invalid.json\n", "667997\n", "VT3214g\n", - "VT3214g model not found\n", "VT4359G\n", "VT4359G model not found\n", "nan\n", "./original_spec_files\\667998_invalid.json\n", "667998\n", "VT3214g\n", - "VT3214g model not found\n", "VT4359G\n", "VT4359G model not found\n", "nan\n", + "./original_spec_files\\668294.json\n", + "668294\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\668294_invalid.json\n", "668294\n", "nan\n", @@ -618,16 +578,13 @@ "./original_spec_files\\669973_invalid.json\n", "669973\n", "VT3214g\n", - "VT3214g model not found\n", "VT4359g\n", "code: 200\n", "nan\n", "./original_spec_files\\669977_invalid.json\n", "669977\n", "VT3214g\n", - "code: 200\n", "VT4359g\n", - "code: 200\n", "nan\n", "./original_spec_files\\670339_invalid.json\n", "670339\n", @@ -659,12 +616,10 @@ "VT1612g\n", "VT1612g model not found\n", "v162851\n", - "v162851 model not found\n", "nan\n", "./original_spec_files\\670944_invalid.json\n", "670944\n", "VT3214g\n", - "VT3214g model not found\n", "VT4299G\n", "VT4299G model not found\n", "nan\n", @@ -673,34 +628,37 @@ "VT1612g\n", "VT1612g model not found\n", "v162851\n", - "v162851 model not found\n", "nan\n", "./original_spec_files\\673157_invalid.json\n", "673157\n", "VT3214g\n", - "VT3214g model not found\n", "VT4359g\n", - "VT4359g model not found\n", "nan\n", "./original_spec_files\\673161_invalid.json\n", "673161\n", "VT3214g\n", - "VT3214g model not found\n", "VT4359g\n", - "VT4359g model not found\n", "nan\n", "./original_spec_files\\673163_invalid.json\n", "673163\n", "VT3214g\n", - "VT3214g model not found\n", "VT4359g\n", - "VT4359g model not found\n", + "nan\n", + "./original_spec_files\\673996.json\n", + "673996\n", + "nan\n", + "nan\n", "nan\n", "./original_spec_files\\673996_invalid.json\n", "673996\n", "nan\n", "nan\n", "nan\n", + "./original_spec_files\\673998.json\n", + "673998\n", + "nan\n", + "nan\n", + "nan\n", "./original_spec_files\\673998_invalid.json\n", "673998\n", "nan\n", @@ -719,76 +677,53 @@ "VT5311C\n", "code: 200\n", "VT4358g\n", - "code: 200\n", "VT5048g\n", - "code: 200\n", "./original_spec_files\\674190_invalid.json\n", "674190\n", "VT5316C\n", - "code: 200\n", "VT4358g\n", - "code: 200\n", "VT5048g\n", - "code: 200\n", "./original_spec_files\\674191_invalid.json\n", "674191\n", "VT5311C\n", - "code: 200\n", "VT4358g\n", - "code: 200\n", "VT5048g\n", - "code: 200\n", "./original_spec_files\\674741_invalid.json\n", "674741\n", "VT3214g\n", - "code: 200\n", "VT4300g\n", "code: 200\n", "nan\n", "./original_spec_files\\674743_invalid.json\n", "674743\n", "VT3214g\n", - "code: 200\n", "VT4300g\n", - "code: 200\n", "nan\n", "./original_spec_files\\675057_invalid.json\n", "675057\n", "VT3214g\n", - "code: 200\n", "VT4300g\n", - "code: 200\n", "nan\n", "./original_spec_files\\675058_invalid.json\n", "675058\n", "VT3214g\n", - "code: 200\n", "VT4300g\n", - "code: 200\n", "nan\n", "./original_spec_files\\675061_invalid.json\n", "675061\n", "VT3214g\n", - "code: 200\n", "VT4300g\n", - "code: 200\n", "nan\n", "./original_spec_files\\675374_invalid.json\n", "675374\n", "VT5316C\n", - "code: 200\n", "VT4358g\n", - "code: 200\n", "VT5048g\n", - "code: 200\n", "./original_spec_files\\675375_invalid.json\n", "675375\n", "VT5311C\n", - "code: 200\n", "VT4358g\n", - "code: 200\n", "VT5048g\n", - "code: 200\n", "./original_spec_files\\676007_invalid.json\n", "676007\n", "?\n", @@ -804,23 +739,17 @@ "./original_spec_files\\678112_invalid.json\n", "678112\n", "VT3214g\n", - "VT3214g model not found\n", "VT4359g\n", - "VT4359g model not found\n", "nan\n", "./original_spec_files\\678116_invalid.json\n", "678116\n", "VT3214g\n", - "VT3214g model not found\n", "VT4359g\n", - "VT4359g model not found\n", "nan\n", "./original_spec_files\\678794_invalid.json\n", "678794\n", "VT3214g\n", - "VT3214g model not found\n", "VT4300g\n", - "VT4300g model not found\n", "nan\n", "./original_spec_files\\681465_invalid.json\n", "681465\n", @@ -834,75 +763,67 @@ "? model not found\n", "nan\n", "nan\n", + "./original_spec_files\\683790_invalid.json\n", + "683790\n", + "VT3214g\n", + "VT5046g\n", + "code: 200\n", + "nan\n", + "./original_spec_files\\683791_invalid.json\n", + "683791\n", + "VT3214g\n", + "VT5046g\n", + "nan\n", "./original_spec_files\\684100_invalid.json\n", "684100\n", "VT3214g\n", - "VT3214g model not found\n", "VT5046g\n", - "code: 200\n", "nan\n", "./original_spec_files\\684101_invalid.json\n", "684101\n", "VT3214g\n", - "code: 200\n", "VT5046g\n", - "code: 200\n", "nan\n", "./original_spec_files\\685221_invalid.json\n", "685221\n", "VT3214g\n", - "code: 200\n", "VT5048g\n", - "code: 200\n", "nan\n", "./original_spec_files\\685222_invalid.json\n", "685222\n", "VT3214g\n", - "code: 200\n", "VT5048g\n", - "code: 200\n", "nan\n", "./original_spec_files\\686951_invalid.json\n", "686951\n", "VT3214g\n", - "code: 200\n", "VT5048g\n", - "code: 200\n", "nan\n", "./original_spec_files\\686955_invalid.json\n", "686955\n", "VT3214g\n", - "code: 200\n", "VT5048g\n", - "code: 200\n", "nan\n", "./original_spec_files\\697836_invalid.json\n", "697836\n", "VT3214g\n", - "code: 200\n", "VT5047g\n", "code: 200\n", "nan\n", "./original_spec_files\\697837_invalid.json\n", "697837\n", "VT3214g\n", - "code: 200\n", "VT5047g\n", - "code: 200\n", "nan\n", "./original_spec_files\\701772_invalid.json\n", "701772\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "nan\n", "./original_spec_files\\701773_invalid.json\n", "701773\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "nan\n", "./original_spec_files\\703066_invalid.json\n", "703066\n", @@ -927,55 +848,41 @@ "./original_spec_files\\704521_invalid.json\n", "704521\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "nan\n", "./original_spec_files\\704522_invalid.json\n", "704522\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "nan\n", "./original_spec_files\\704523_invalid.json\n", "704523\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "nan\n", "./original_spec_files\\705161_invalid.json\n", "705161\n", "VT3214g\n", - "code: 200\n", "nan\n", "nan\n", "./original_spec_files\\706300_invalid.json\n", "706300\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "nan\n", "./original_spec_files\\706301_invalid.json\n", "706301\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "nan\n", "./original_spec_files\\706434_invalid.json\n", "706434\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "nan\n", "./original_spec_files\\708365_invalid.json\n", "708365\n", "VT5316C\n", - "code: 200\n", "VT5353g\n", "code: 200\n", "VT5415g\n", @@ -985,55 +892,38 @@ "VT5315C\n", "code: 200\n", "VT5353g\n", - "code: 200\n", "VT5415g\n", - "code: 200\n", "./original_spec_files\\708369_invalid.json\n", "708369\n", "VT5315C\n", - "code: 200\n", "VT5353g\n", - "code: 200\n", "VT5415g\n", - "code: 200\n", "./original_spec_files\\708370_invalid.json\n", "708370\n", "VT5316C\n", - "code: 200\n", "VT5353g\n", - "code: 200\n", "VT5415g\n", - "code: 200\n", "./original_spec_files\\708373_invalid.json\n", "708373\n", "GT254C\n", "code: 200\n", "VT5353g\n", - "code: 200\n", "VT5415g\n", - "code: 200\n", "./original_spec_files\\708374_invalid.json\n", "708374\n", "GT254C\n", - "code: 200\n", "VT5353g\n", - "code: 200\n", "VT5415g\n", - "code: 200\n", "./original_spec_files\\708375_invalid.json\n", "708375\n", "VT5353g\n", - "code: 200\n", "VT5598C\n", "code: 200\n", "VT5415g\n", - "code: 200\n", "./original_spec_files\\708376_invalid.json\n", "708376\n", "VT5353g\n", - "code: 200\n", "VT5598C\n", - "code: 200\n", "708367\n", "708367 model not found\n", "./original_spec_files\\709011_invalid.json\n", @@ -1041,103 +931,84 @@ "VT6181g\n", "code: 200\n", "VT5046g\n", - "code: 200\n", "nan\n", "./original_spec_files\\709013_invalid.json\n", "709013\n", "VT6181g\n", - "code: 200\n", "VT5046g\n", - "code: 200\n", "nan\n", "./original_spec_files\\709016_invalid.json\n", "709016\n", "VT6181g\n", - "code: 200\n", "VT5046g\n", - "code: 200\n", "nan\n", "./original_spec_files\\709203_invalid.json\n", "709203\n", "221118-11\n", "code: 200\n", "221118-11\n", - "code: 200\n", "VT4636g\n", "VT4636g model not found\n", "./original_spec_files\\709220_invalid.json\n", "709220\n", "VT3214g\n", - "VT3214g model not found\n", "VT6173g\n", "VT6173g model not found\n", "nan\n", "./original_spec_files\\709221_invalid.json\n", "709221\n", "VT3214g\n", - "VT3214g model not found\n", "VT6173g\n", "VT6173g model not found\n", "nan\n", "./original_spec_files\\709222_invalid.json\n", "709222\n", "VT3214g\n", - "VT3214g model not found\n", "VT6173g\n", "VT6173g model not found\n", "nan\n", "./original_spec_files\\709393_invalid.json\n", "709393\n", "221118-11\n", - "221118-11 model not found\n", "221118-11\n", - "221118-11 model not found\n", "VT4635g\n", "VT4635g model not found\n", "./original_spec_files\\709394_invalid.json\n", "709394\n", "221118-11\n", - "221118-11 model not found\n", "221118-11\n", - "221118-11 model not found\n", "VT4635g\n", "VT4635g model not found\n", "./original_spec_files\\709838_invalid.json\n", "709838\n", "VT3214g\n", - "VT3214g model not found\n", "VT5047g\n", - "VT5047g model not found\n", "nan\n", "./original_spec_files\\709839_invalid.json\n", "709839\n", "VT3214g\n", - "VT3214g model not found\n", "VT5047g\n", - "VT5047g model not found\n", "nan\n", + "./original_spec_files\\712226_invalid.json\n", + "712226\n", + "VT6181g\n", + "VT6181g\n", + "VT3212g\n", "./original_spec_files\\712228_invalid.json\n", "712228\n", "VT6181g\n", - "VT6181g model not found\n", "VT6181g\n", - "VT6181g model not found\n", "VT3212g\n", - "VT3212g model not found\n", "./original_spec_files\\713600_invalid.json\n", "713600\n", "221118-11\n", - "221118-11 model not found\n", "221118-11\n", - "221118-11 model not found\n", "VT4636g\n", "VT4636g model not found\n", "./original_spec_files\\713601_invalid.json\n", "713601\n", "221118-11\n", - "221118-11 model not found\n", "221118-11\n", - "221118-11 model not found\n", "VT4635g\n", "VT4635g model not found\n", "./original_spec_files\\715345_invalid.json\n", @@ -1145,39 +1016,66 @@ "GT232C\n", "code: 200\n", "VT3214g\n", - "code: 200\n", + "VT6173g\n", + "VT6173g model not found\n", + "./original_spec_files\\715346_invalid.json\n", + "715346\n", + "GT232C\n", + "VT3214g\n", "VT6173g\n", "VT6173g model not found\n", "./original_spec_files\\715347_invalid.json\n", "715347\n", "GT232C\n", - "GT232C model not found\n", "VT3214g\n", - "VT3214g model not found\n", "VT6173g\n", "VT6173g model not found\n", + "./original_spec_files\\717443_invalid.json\n", + "717443\n", + "GT250C\n", + "code: 200\n", + "VT3214g\n", + "VT3212g\n", "./original_spec_files\\717444_invalid.json\n", "717444\n", "GT250C\n", - "code: 200\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", "./original_spec_files\\717445_invalid.json\n", "717445\n", "GT250C\n", - "code: 200\n", "VT3214g\n", - "code: 200\n", "VT3212g\n", - "code: 200\n", + "./original_spec_files\\717612_invalid.json\n", + "717612\n", + "VT6466g\n", + "VT6466g model not found\n", + "nan\n", + "nan\n", + "./original_spec_files\\717614_invalid.json\n", + "717614\n", + "VT6466g\n", + "VT6466g model not found\n", + "VT4358g\n", + "VT6171g\n", + "VT6171g model not found\n", + "./original_spec_files\\718162_invalid.json\n", + "718162\n", + "VT4358g\n", + "VT6171g\n", + "VT6171g model not found\n", + "nan\n", + "./original_spec_files\\718168_invalid.json\n", + "718168\n", + "VT4358g\n", + "VT6171g\n", + "VT6171g model not found\n", + "nan\n", "./original_spec_files\\719652_invalid.json\n", "719652\n", "VT5317c\n", "VT5317c model not found\n", "VT3214g\n", - "VT3214g model not found\n", "VT6173g\n", "VT6173g model not found\n", "./original_spec_files\\719654_invalid.json\n", @@ -1185,17 +1083,40 @@ "VT5317c\n", "VT5317c model not found\n", "VT3214g\n", - "VT3214g model not found\n", "VT6173g\n", "VT6173g model not found\n", - "{'VT3214g': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3212g': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3216g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3215g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3213g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4360g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4299g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4359g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'v162851': {'material_type': 'Virus', 'name': 'pAAV-CAG-FLEX-tdTomato Addgene 28306-PHPeB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5316C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4358g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5048g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5311C': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4300g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5046g': {'material_type': 'Virus', 'name': 'VT6181g', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5047g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5353g': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5415g': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5315C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'GT254C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5598C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT6181g': {'material_type': 'Virus', 'name': 'VT6181g', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, '221118-11': {'material_type': 'Virus', 'name': 'AAV-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'GT232C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'GT250C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}}\n" + "./original_spec_files\\720164_invalid.json\n", + "720164\n", + "VT4358g\n", + "VT6171g\n", + "VT6171g model not found\n", + "nan\n", + "./original_spec_files\\720165_invalid.json\n", + "720165\n", + "VT4358g\n", + "VT6171g\n", + "VT6171g model not found\n", + "nan\n", + "./original_spec_files\\721056_invalid.json\n", + "721056\n", + "VT4358g\n", + "VT6171g\n", + "VT6171g model not found\n", + "nan\n", + "./original_spec_files\\721059_invalid.json\n", + "721059\n", + "VT4358g\n", + "VT6171g\n", + "VT6171g model not found\n", + "nan\n", + "{'VT3214g': {'material_type': 'Virus', 'name': 'pAAV-Syn-Flex-TREx2-tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3212g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3216g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3215g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT3213g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4360g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4299g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4359g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'v162851': {'material_type': 'Virus', 'name': 'pAAV-CAG-FLEX-tdTomato Addgene 28306-PHPeB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5316C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4358g': {'material_type': 'Virus', 'name': 'pAAV-Syn-Flex-TREx2-tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5048g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5311C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT4300g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5046g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5047g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5353g': {'material_type': 'Virus', 'name': 'pAAV-Syn-Flex-TREx2-tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5415g': {'material_type': 'Virus', 'name': 'pAAV-7x-TRE-3x-eGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5315C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'GT254C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT5598C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'VT6181g': {'material_type': 'Virus', 'name': 'VT6181g', 'tars_identifiers': {'virus_tars_id': None, 'plasmid_tars_alias': None, 'prep_lot_number': 'VT6181g', 'prep_date': '2023-10-06', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, '221118-11': {'material_type': 'Virus', 'name': 'AAV-Syn-iCre', 'tars_identifiers': {'virus_tars_id': 'AiV300043', 'plasmid_tars_alias': None, 'prep_lot_number': '221118-11', 'prep_date': '2022-11-28', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'GT232C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}, 'GT250C': {'material_type': 'Virus', 'name': 'NA', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': None, 'titer_unit': 'gc/mL'}}\n" ] } ], "source": [ "subj_procedures = {}\n", "\n", - "download_files = False\n", + "download_files = True\n", "\n", "files = glob.glob(\"./original_spec_files/*.json\")\n", "\n", @@ -1205,7 +1126,7 @@ "if download_files:\n", " for file in files: \n", " print(file)\n", - " subj_id = file.split(\"\\\\\")[-1].split(\"_\")[0]\n", + " subj_id = file.split(\"\\\\\")[-1].split(\"_\")[0].split(\".\")[0]\n", " print(subj_id)\n", " if int(subj_id) not in materials_sheet[\"Mouse ID\"].tolist():\n", " print(\"not found\")\n", @@ -1217,7 +1138,9 @@ " continue\n", "\n", " for val in [1,2,3]:\n", + " item = None\n", " tars_id = subj_row[f\"Virus{val} ID\"].values[0]\n", + " logging.info(f\"Processing {tars_id} for {subj_id}\")\n", " print(tars_id)\n", "\n", " if pd.isna(tars_id):\n", @@ -1225,6 +1148,8 @@ "\n", " if tars_id not in tars_models.keys():\n", " request = requests.get(f\"http://aind-metadata-service/tars_injection_materials/{tars_id}\")\n", + " else:\n", + " continue\n", "\n", " if request.status_code == 404 or request.status_code == 500:\n", " print(f\"{tars_id} model not found\")\n", @@ -1239,6 +1164,7 @@ " continue\n", "\n", " if item['message'] == 'Valid Model.':\n", + " logging.info(f\"Valid model for {tars_id}: {item['data']}\")\n", " tars_models[tars_id] = item['data']\n", " else:\n", " print(f\"invalid model for {tars_id}\")\n", @@ -1247,6 +1173,7 @@ "print(tars_models)\n", "\n", "for key, value in tars_models.items():\n", + " logging.info(f\"Writing {key} for {value}\")\n", " with open(f'./tars_info/{key}.json', 'w') as outfile:\n", " json.dump(value, outfile)" ] @@ -1261,9 +1188,10 @@ "tars_files = glob.glob(\"./tars_info/*.json\")\n", "tars_models = {}\n", "for file in tars_files:\n", + " logging.info(f\"Reading file {file}\")\n", " with open(file) as json_file:\n", " data = json.load(json_file)\n", - " tars_models[data['tars_identifiers'][\"prep_lot_number\"]] = data\n" + " tars_models[str(data['tars_identifiers'][\"prep_lot_number\"])] = data\n" ] }, { @@ -1291,6 +1219,7 @@ " virus = subj_row[f\"Virus{val}\"].values[0]\n", " logging.info(f\"virus{val}: {virus}\")\n", " if pd.isna(virus):\n", + " logging.info(f\"virus{val} is NA\")\n", " continue\n", "\n", " virus_id = subj_row[f\"Virus{val} ID\" ].values[0] # use this to look up TARS info\n", @@ -1302,7 +1231,10 @@ " if pd.isna(mix_volume):\n", " mix_volume = .1\n", " else:\n", - " mix_volume = float(mix_volume.split(\"u\")[0])\n", + " if isinstance(mix_volume, str):\n", + " mix_volume = float(mix_volume.split(\"u\")[0])\n", + " else:\n", + " mix_volume = float(mix_volume)\n", " mix_volume = mix_volume*.0001\n", " logging.info(f\"titer: {titer}\")\n", " logging.info(f\"mix vol: {mix_volume}\")\n", @@ -1315,19 +1247,19 @@ " logging.info(\"checking titer vs dose/volume\")\n", " logging.info(f\"titer: {titer}, dose: {dose}, volume: {volume}, mix volume: {mix_volume}\")\n", " \n", - " original_titer = float(titer)\n", - " titer = original_titer\n", + " # original_titer = float(titer)\n", + " # titer = original_titer\n", "\n", - " computed_titer = False\n", - " try:\n", - " logging.info(\"trying\")\n", - " if not pd.isna(volume):\n", - " logging.info(\"volume is not NA\")\n", - " volume = float(volume.split(\"u\")[0])\n", - " titer = int(dose/(volume*.001))\n", - " computed_titer = True\n", - " except:\n", - " logging.info(\"volume is not a number\")\n", + " # computed_titer = False\n", + " # try:\n", + " # logging.info(\"trying\")\n", + " # if not pd.isna(volume):\n", + " # logging.info(\"volume is not NA\")\n", + " # volume = float(volume.split(\"u\")[0])\n", + " # titer = int(dose/(volume*.001))\n", + " # computed_titer = True\n", + " # except:\n", + " # logging.info(\"volume is not a number\")\n", " \n", " logging.info(\"out\")\n", " mix_titer = None\n", @@ -1373,7 +1305,10 @@ " # do some checks to see how accurate titer is to dose/volume\n", " \n", " tars = None\n", - " if virus_id in tars_models.keys():\n", + " logging.info(f\"virus_id: {virus_id}\")\n", + " logging.info(f\"tars_models: {tars_models.keys()}\")\n", + " if str(virus_id) in tars_models.keys():\n", + " logging.info(f\"found tars for {virus_id}\")\n", " tars = TarsVirusIdentifiers.model_validate(tars_models[virus_id][\"tars_identifiers\"])\n", " logging.info(f\"tars for {subj_id}: {tars}\")\n", "\n", @@ -1402,362 +1337,289 @@ "name": "stdout", "output_type": "stream", "text": [ - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='576404' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='603033' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609105' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='576404' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='576404' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='603033' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='603033' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='609105' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, 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701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609107' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='609107' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='609281' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='609281' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='613814' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='613814' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='614978' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='614978' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='614980' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='614980' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='615296' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='615296' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='618583' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital 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'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='618584' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='618584' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='620629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629']}], 'notes': None}\n", - "{'describedBy': 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None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648077' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': 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'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='620629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='620629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': 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'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='620631' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648077' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648079' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648079' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648434' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648434' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648435' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648435' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648436' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648436' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648695' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648695' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648696' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648696' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648697' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648697' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648698' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648698' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698']}], 'notes': None}\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n", - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n" - ] - }, - { - "name": "stdout", - "output_type": "stream", - "text": [ - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648699' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648699' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648700' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648700' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648858' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital 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'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648860' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648860' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648861' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648861' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='648862' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='648862' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650008' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='650008' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650009' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='650009' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650010' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='650010' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650011' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='650011' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650819', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='650819' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650819']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651305' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='651305' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651324' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651327' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 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[{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 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'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='651324' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='651327' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='651327' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='651895' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='651897' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='651897' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652440', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652440' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652440', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='652440' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652441' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='652441' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652445' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='652445' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652779' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='652779' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779']}], 'notes': None}\n" + "\n" ] }, { @@ -1766,7 +1628,6 @@ "text": [ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -1813,6 +1674,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -1837,155 +1699,7 @@ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n" - ] - }, - { - "name": "stdout", - "output_type": "stream", - "text": [ - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='652781' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653153' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653158' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653159' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653431' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653432' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653980' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='653981' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='654306' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='654308' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='654727' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='655145' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='655146' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655147', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='655147' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='657676' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658733', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658733' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658734', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658734' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658735' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659142', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='659142' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='659145' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='659146' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", - "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", - "\n", - "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660625' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660627' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627']}], 'notes': None}\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ + " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -2004,6 +1718,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -2031,7 +1746,6 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -2039,10 +1753,10 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -2058,6 +1772,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n" ] }, @@ -2065,229 +1780,347 @@ "name": "stdout", "output_type": "stream", "text": [ - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660630' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660949' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='652781' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='660950' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653153' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661293', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='661293' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653158' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='661300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653159' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '663410', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='663410' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653430' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653431' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653431' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653432' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653432' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653980' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '663412', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='663412' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='653981' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='664761' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='654306' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664762', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='664762' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='654308' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665081' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='654727' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665082' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '655145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='655145' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665083', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665083' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '655146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='655146' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '655147', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='655147' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='665470' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='657676' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667352', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': 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schema_version='0.11.5' subject_id='667352' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658733', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658733']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='658733' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 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'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '658734', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='658734' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='658735' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='658735' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '659142', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='659142' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667354', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667354' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '659145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='659145' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667857' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='659146' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667996' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660625' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660625' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660627' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660627' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660629' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660630' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660630' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660949' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667997', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667997' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='660950' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='667998' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '661293', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='661293' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='668294' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669973' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='661300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='669977' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '663410', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='663410' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670339', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670339' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670344', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670344' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670471', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670471' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670808', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670808' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '663412', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='663412' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670809', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670809' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='664761' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670944', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='670944' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '664762', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='664762' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '671477', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='671477' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='665081' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673157', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673157' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='665082' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673161' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665083', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='665083' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673163', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673163' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='665465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673996' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='673998' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998']}], 'notes': None}\n" + "{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='665470' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667352', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='667352' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667354', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='667354' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='667857' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='667996' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667997', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='667997' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='667998' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='668294' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='668294' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='669973' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='669977' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670339', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='670339' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670344', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='670344' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670471', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='670471' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670808', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='670808' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n" ] }, { @@ -2316,6 +2149,17 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", @@ -2344,6 +2188,9 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", @@ -2356,6 +2203,9 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", @@ -2372,6 +2222,7 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -2411,6 +2262,34 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n" ] }, @@ -2418,270 +2297,324 @@ "name": "stdout", "output_type": "stream", "text": [ - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674184' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670809', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='670809' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674185' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670944', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='670944' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674190' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '671477', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='671477' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673157', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='673157' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674741', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674741' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='673161' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674743', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='674743' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673163', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='673163' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675057', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675057' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='673996' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='673996' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='673998' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='673998' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='674184' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675058', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675058' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 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'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675061', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675061' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='674190' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675374' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='674191' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='675375' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674741', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='674741' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '676007', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='676007' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '676009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='676009' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678112', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='678112' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674743', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='674743' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678116', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='678116' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675057', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital 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'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678794', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='678794' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675058', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='675058' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '681465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='681465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '681469', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='681469' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '684100', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='684100' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675061', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='675061' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '684101', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='684101' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='675374' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '685221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='685221' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='675375' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '685222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='685222' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '676007', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='676007' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '676009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='676009' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '678112', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='678112' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '686951', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='686951' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '678116', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='678116' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '686955', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='686955' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '678794', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='678794' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '697836', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='697836' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '681465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='681465' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '681469', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='681469' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '683790', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-07-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['683790'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='683790' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-07-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['683790'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '697837', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='697837' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['683790'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '683791', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-07-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['683791'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='683791' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-07-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['683791'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '701772', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='701772' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['683791'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '684100', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='684100' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '701773', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='701773' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '684101', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='684101' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703066', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='703066' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703067', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='703067' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703070', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='703070' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703071', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='703071' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704521', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='704521' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '685221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='685221' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704522', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='704522' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '685222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='685222' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704523', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='704523' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '686951', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='686951' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '705161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='705161' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '686955', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='686955' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='706300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '697836', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='697836' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706301', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='706301' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '697837', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='697837' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='706434' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '701772', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital 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'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708365', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708365' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '701773', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='701773' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708368', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708368' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '703066', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='703066' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '703067', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='703067' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '703070', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='703070' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '703071', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='703071' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '704521', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='704521' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368']}], 'notes': None}\n" + "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '704522', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='704522' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '704523', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='704523' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '705161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='705161' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '706300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='706300' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '706301', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='706301' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '706434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='706434' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n" ] }, { @@ -2718,6 +2651,29 @@ " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", @@ -2787,6 +2743,9 @@ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", @@ -2800,6 +2759,7 @@ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", @@ -2831,48 +2791,63 @@ "name": "stdout", "output_type": "stream", "text": [ - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708369', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708369' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708365', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='708365' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708368', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='708368' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708370', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708370' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708369', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='708369' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708373', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708373' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708370', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='708370' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708374' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708373', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='708373' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708375' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='708374' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708376', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='708376' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='708375' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708376', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='708376' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709011']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709011' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709011']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-12-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -2905,27 +2880,27 @@ "\n", "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709203']}], 'notes': None}\n", "{'procedure_type': 'Surgery', 'start_date': '2023-11-28', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.3', 'animal_weight_post': '20.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709220', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709220' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709220', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='709220' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709221' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='709221' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709222' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='709222' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222']}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709393', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709393']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.7', 'animal_weight_post': '20.8', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '56.99999999999999733546474090', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709393' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709393']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '20.7', 'animal_weight_post': '20.8', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '56.99999999999999733546474090', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '5.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['200.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-11-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -2942,24 +2917,28 @@ "\n", "{'procedure_type': 'Surgery', 'start_date': '2023-12-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709394']}], 'notes': None}\n", "{'procedure_type': 'Surgery', 'start_date': '2023-11-09', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.1', 'animal_weight_post': '22.1', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709838', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709838' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709838', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='709838' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709839', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='709839' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709839', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='709839' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '712228', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='712228' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228']}], 'notes': None}\n", - "{'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '712226', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712226'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='712226' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712226'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712226'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '712228', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='712228' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", + "{'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}\n", "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '713600', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713600']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-08', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.3'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='713600' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2023-12-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-01-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713600']}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2023-12-08', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.3'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}] specimen_procedures=[] notes=None\n", "{'procedure_type': 'Surgery', 'start_date': '2023-12-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", @@ -2976,49 +2955,82 @@ "\n", "{'procedure_type': 'Surgery', 'start_date': '2024-01-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['713601']}], 'notes': None}\n", "{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.7', 'animal_weight_post': '21.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.43', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.4'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '715345', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='715345' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '715345', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='715345' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '715347', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='715347' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '715346', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715346'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='715346' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715346'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '717444', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='717444' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715346'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '715347', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='715347' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '717445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='717445' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '717443', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717443'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='717443' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717443'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '719652', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='719652' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717443'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '717444', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='717444' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652']}], 'notes': None}\n", - "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '719654', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654']}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", - "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.11.5' subject_id='719654' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654']}], 'notes': None}] specimen_procedures=[] notes=None\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '717445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='717445' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", "\n", "\n", - "{'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654']}], 'notes': None}\n", - "[]\n" + "{'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '717612', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717612'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='717612' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717612'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717612'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '717614', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717614'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='717614' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717614'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717614'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '718162', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718162'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='718162' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718162'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718162'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '718168', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718168'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='718168' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718168'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718168'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '719652', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='719652' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n" ] }, { @@ -3052,6 +3064,18 @@ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", @@ -3109,6 +3133,95 @@ " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n", + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "{'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '719654', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='719654' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '720164', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['720164'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='720164' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['720164'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['720164'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '720165', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['720165'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='720165' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['720165'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['720165'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '721056', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['721056'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='721056' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['721056'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-03-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['721056'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "{'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '721059', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['721059'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}], 'specimen_procedures': [], 'notes': None}\n", + "describedBy='https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py' schema_version='0.13.3' subject_id='721059' subject_procedures=[{'procedure_type': 'Surgery', 'start_date': '2024-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}, {'procedure_type': 'Surgery', 'start_date': '2024-03-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['721059'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}] specimen_procedures=[] notes=None\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None}\n", + "['Template', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Chat-IRES-Cre;Slc6a3-T2A-FlpO(ND)', 670784, 670784, 676411, 676410, 676407, 676403, 691966, 691965, 694593, 694590, 694589, 694588, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'ePet-Cre', 650008, 650009, 650010, 650011, 667241, 667242, 667244, 669528, 669530, 669533, 673887, 673893, 673894, 673896, 677995, 677993, 677992, 697837, 697836, nan, 'Slc6a4-Cre', 652779, 652781, 669973, 669974, 669977, 673286, 673288, 673289, 684436, 684434, 685592, 685590, 685586, 704473, 704471, 704470, 704469, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'xx', nan, 'Sert-FlpO', 678601, 678600, 678599, 678991, 678988, 678987, 686488, 686485, 686486, 686487, 686484, 686483, 703261, 703260, 703259, 703258, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre', 648434, 648435, 648436, 651305, 684101, 684100, 685222, 685221, 708490, 708482, 708489, 708481, 717615, 717614, 717612, 721328, 717613, 721330, 721331, 721332, 722845, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; Ai166', 651324, 651327, 664953, 664956, 664957, 664958, 669461, 669462, 669790, 669793, 686714, 684924, 684920, 685244, 685242, 685241, 692426, 692425, 692423, 692870, 692869, 692867, 697573, 697572, 697571, 697569, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Dbh-Cre; DAT-Flp', 671476, 671477, 684932, 684931, 684929, 692376, 692371, 692368, 705056, 705052, nan, 'Dbh-Cre; Sert-Flp', 670808, 670809, 670812, 670813, 682904, 682903, 682900, 682852, 693733, 693732, 693729, 701928, 701927, 701926, 701924, 702924, 702920, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Hdc-Cre', 667857, 667858, 667860, 668956, 668957, 668962, 674681, 674682, 674684, 679201, 679200, 679199, nan, 'Hdc-Cre_IM1; Ai166', 668294, 668295, 668296, 668297, 674884, 674886, 681687, 681686, 681690, 681692, 695660, 695660, 695658, 695657, 697890, 697889, 697887, 697886, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Cart-IRES2-Cre-neo', 652440, 652441, 652445, 652446, 653980, 653981, 653983, 653984, 660949, 660950, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Kara notified to stop breeding 2/28/23', nan, nan, nan, nan, nan, nan, nan, 'Calb2-CreERT2;Ai166', 603033, 603034, 603036, 603037, 603039, 603040, 605952, 605955, 608895, 608896, 608900, 608901, 611326, 611328, 611329, 611330, 611333, 611334, 611646, 614952, 614956, 616568, 619050, 619051, 620629, 620630, 620631, 620633, 620639, 620640, 620642, 620643, 626319, 626679, 626681, 627947, 627949, 627950, 634172, 634173, 650817, 650818, 650819, 658733, 658734, 658735, 660625, 660627, 660629, 660630, 668384, 668385, 668386, 668556, 668557, 668558, 668559, 671997, 673993, 673994, 673996, 673998, 674000, 674093, 682218, 682217, 682216, 682215, 682214, 682210, 682205, 687346, 683441, 686040, 686039, nan, 'Slc17a6-IRES-Cre', 603308, 603310, 603311, 609281, 609283, 609285, 609286, 609105, 609106, 609107, 613810, 613813, 613814, 613817, 614978, 614979, 614980, 615296, 615299, 618583, 618584, 618586, 618589, 625096, 637432, 637436, 637439, 638331, 638332, 654302, 654304, 654306, 654308, 654309, 654310, 673157, 673158, 673160, 673161, 673163, 678794, 678797, 689898, 689897, 689896, 689895, 689893, 696800, 696140, 696139, 706300, 706301, 706302, 706434, 706435, 724752, 724753, 625097, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre;Ai223', 685376, 685372, 695307, 695305, 705159, 705160, 705161, 705162, 705163, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Penk1-IRES-Cre', 667154, 667156, 670944, 674740, 674741, 674742, 674743, 674744, 683787, 683788, 683789, 683790, 683791, 683792, 670948, 'Gal-Cre_KI187', 648079, 648077, 653153, 653158, 653159, 653162, 659142, 659144, 659145, 659146, 663394, 663395, 709848, 709849, 709850, 709851, 709852, 720164, 720165, 720166, nan, 'Ntrk1_IRES-Cre', 651895, 651897, 651899, 651900, 651901, 652228, 655145, 655146, 655147, 655148, 662960, 662965, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to stop breeding', nan, nan, nan, 'Necab1-IRES-Cre', 648858, 648860, 648861, 648862, 662770, 662774, 662775, 670934, 670936, 670938, 3163606, 3163608, 662771, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'notify Kara to pause breeding- remember to adjust titer ttA', nan, nan, nan, 'Slc6a5-Cre_KF109', 648695, 648696, 648697, 648698, 648699, 648700, 667352, 667353, 667354, 667355, 664549, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Notified Kara to pause but not eliminate this line until the last mouse is perfused ~ April 15th', nan, nan, nan, nan, nan, 'Slc17a8-iCre', 654727, 657676, 657677, 657679, 661293, 661299, 661300, 663413, 663412, 663410, 663409, 'Informed Kara to stop breeding after last perfusion Is complete', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Crh-IRES-Cre_BL', 664760, 664761, 664762, 665465, 665467, 665469, 665470, 678112, 678116, 686955, 686953, 686952, 686951, 686950, 686948, 686947, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Asked Sara to stop breeding 6/14/23', nan, 'Grp-IRES-Cre_KH288', 665081, 665082, 665083, 667267, 667996, 667997, 667998, 675057, 675058, 675059, 675060, 675061, 677572, 677574, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Pvalb-IRES-Cre', 670471, 676009, 676007, 704520, 704521, 704522, 704523, 721054, 721056, 721059, 734738, 'St18-T2A-Cre-B2', 516429, nan, nan, nan, 'Penk-IRES2-Cre-neo', 670339, 670344, 681465, 681469, nan, nan, nan, nan, nan, nan, 'Slc32a1-IRES-Cre', 701770, 701771, 701772, 701773, 701774, 709220, 709221, 709222, 709838, 709839, nan, 'C57BL6J + CN5146', 707208, 'Rorb-IRES2-Cre', 3163611, nan, nan, 'Ntsr1-Cre_GN220', 709011, 709013, 709014, 709016, 717983, 717984, 717981, 719180, 719179, nan, nan, 'Rbp4-Cre_KL100', 712226, 712228, 718162, 718163, 718166, 718168, 719744, 719747, 719749, '109_11', '109_03', nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL6J + Thomas Jefferson rabies', 397, nan, nan, 'C57BL6J + AAVrg Cre + RO Supernova', 709393, 709394, 709203, 709204, 713600, 713601, 'C57BL6J + eHGT_607h', 708367, 708375, 708376, nan, nan, 'C57BL6J + MGT_E252', 674184, 674190, 675374, 708365, 708370, 708371, 'C57BL6J + MGT_E256', 708364, 708368, 708369, nan, nan, 'C57BL6J + MGT_E255', 674185, 674191, 675375, 708366, 708373, 708374, 'C57BL/6J + MGT_E241', 717442, 717443, 717444, 717445, nan, nan, nan, nan, 'C57BL/6J + MGT_E199', 715344, 715345, 715346, 715347, nan, nan, nan, nan, 'C57BL/6J + MGT_E265', 719651, 719652, 719653, 719654, nan, 737561, 737562, 737563, 737564, 'C57BL/6J + MGT_E253', 720811, 720812, 720813, 720814, nan, 729504, 729505, 729506, 729507, nan, 'C57BL/6J + MGT_E267', 721826, 721828, 721829, 721830, nan, 730901, 730902, 730903, 730904, 'C57BL/6J + Cre in ALM + GFP in Medulla', 703066, 703067, 703070, 703071, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Lbhd2-Cre-ERT2', 236, 237, 238, 239, nan, nan, nan, nan, 'Slc17a7-IRES2-Cre', 730221, nan, 730223, nan, 730228, nan, 730229, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'C57BL/6J + CN_5129', 740012, nan, 740013, nan, 740014, nan, 740015, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 'Syt17-Cre_NO14', 733838, nan, 733840, nan, nan, nan, nan, nan, nan, nan, nan, 'Htr2a-Cre_KM207', 733418, nan, 733420, nan, nan, nan, nan, nan, nan, nan, nan]\n", + "\n", + "\n", + "{'procedure_type': 'Surgery', 'start_date': '2024-03-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['721059'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None}\n", + "[]\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", From 6069224f9917bee4b021391a9a353557ec33c8ab Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Fri, 17 May 2024 15:55:11 -0400 Subject: [PATCH 40/43] Update ingest_exaspim.ipynb --- scripts/Exaspim_ingest/ingest_exaspim.ipynb | 1074 ++++++------------- 1 file changed, 349 insertions(+), 725 deletions(-) diff --git a/scripts/Exaspim_ingest/ingest_exaspim.ipynb b/scripts/Exaspim_ingest/ingest_exaspim.ipynb index a461b3ff..9c790ff8 100644 --- a/scripts/Exaspim_ingest/ingest_exaspim.ipynb +++ b/scripts/Exaspim_ingest/ingest_exaspim.ipynb @@ -161,400 +161,11 @@ "cell_type": "code", "execution_count": 3, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "576404\n", - "code: 200\n", - "609105\n", - "609105 model not found 500\n", - "609107\n", - "609107 model not found 500\n", - "609281\n", - "609281 model 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"code: 406\n", - "676007\n", - "code: 406\n", - "671477\n", - "671477 model not found 500\n", - "670808\n", - "670808 model not found 500\n", - "670809\n", - "670809 model not found 500\n", - "674741\n", - "674741 model not found 500\n", - "659142\n", - "659142 model not found 500\n", - "663410\n", - "663410 model not found 500\n", - "673998\n", - "code: 200\n", - "655147\n", - "655147 model not found 500\n", - "673996\n", - "code: 200\n", - "665083\n", - "665083 model not found 500\n", - "652440\n", - "652440 model not found 500\n", - "397\n", - "675375\n", - "675375 model not found 500\n", - "675374\n", - "675374 model not found 500\n", - "675058\n", - "675058 model not found 500\n", - "109_11\n", - "109_11 model not found 404\n", - "109_03\n", - "109_03 model not found 404\n", - "655146\n", - "655146 model not found 500\n", - "655145\n", - "655145 model not found 500\n", - "697837\n", - "697837 model not found 500\n", - "697836\n", - "697836 model not found 500\n", - "236\n", - "237\n", - "238\n", - "239\n", - "686955\n", - "686955 model not found 500\n", - "667998\n", - "667998 model not found 500\n", - "686951\n", - "686951 model not found 500\n", - "667996\n", - "667996 model not found 500\n", - "701772\n", - "701772 model not found 500\n", - "673163\n", - "673163 model not found 500\n", - "659145\n", - "659145 model not found 500\n", - "701773\n", - "701773 model not found 500\n", - "678794\n", - "678794 model not found 500\n", - "673161\n", - "673161 model not found 500\n", - "678112\n", - "678112 model not found 500\n", - "667997\n", - "667997 model not found 500\n", - "673157\n", - "673157 model not found 500\n", - "708373\n", - "708373 model not found 500\n", - "708370\n", - "708370 model not found 500\n", - "708374\n", - "708374 model not found 500\n", - "708368\n", - "708368 model not found 500\n", - "708369\n", - "708369 model not found 500\n", - "708375\n", - "708375 model not found 500\n", - "708376\n", - "708376 model not found 500\n", - "705161\n", - "705161 model not found 500\n", - "685221\n", - "685221 model not found 500\n", - "685222\n", - "685222 model not found 500\n", - "684101\n", - "684101 model not found 500\n", - "684100\n", - "684100 model not found 500\n", - "708365\n", - "708365 model not found 500\n", - "709393\n", - "709393 model not found 500\n", - "709394\n", - "709394 model not found 500\n", - "709222\n", - "709222 model not found 500\n", - "709221\n", - "709221 model not found 500\n", - "709220\n", - "709220 model not found 500\n", - "706434\n", - "706434 model not found 500\n", - "706300\n", - "706300 model not found 500\n", - "706301\n", - "706301 model not found 500\n", - "703071\n", - "code: 406\n", - "703066\n", - "code: 406\n", - "703070\n", - "code: 406\n", - "703067\n", - "code: 406\n", - "709839\n", - "709839 model not found 500\n", - "709013\n", - "709013 model not found 500\n", - "709838\n", - "709838 model not found 500\n", - "704523\n", - "704523 model not found 500\n", - "713601\n", - "713601 model not found 500\n", - "713600\n", - "713600 model not found 500\n", - "704521\n", - "704521 model not found 500\n", - "709203\n", - "709203 model not found 500\n", - "709016\n", - "709016 model not found 500\n", - "704522\n", - "704522 model not found 500\n", - "715347\n", - "715347 model not found 500\n", - "719652\n", - "719652 model not found 500\n", - "719654\n", - "719654 model not found 500\n", - "715345\n", - "715345 model not found 500\n", - "717445\n", - "717445 model not found 500\n", - "717444\n", - "717444 model not found 500\n", - "712228\n", - "code: 406\n", - "709011\n", - "709011 model not found 500\n", - "709014\n", - "709014 model not found 500\n", - "717443\n", - "717443 model not found 500\n", - "715346\n", - "715346 model not found 500\n", - "712226\n", - "code: 406\n", - "718162\n", - "718162 model not found 500\n", - "718168\n", - "718168 model not found 500\n", - "683791\n", - "683791 model not found 500\n", - "720165\n", - "720165 model not found 500\n", - "717614\n", - "717614 model not found 500\n", - "721056\n", - "721056 model not found 500\n", - "719179\n", - "719179 model not found 500\n", - "721059\n", - "721059 model not found 500\n", - "717984\n", - "717984 model not found 500\n", - "720164\n", - "720164 model not found 500\n", - "683790\n", - "683790 model not found 500\n", - "717612\n", - "717612 model not found 500\n" - ] - } - ], + "outputs": [], "source": [ "subj_procedures = {}\n", "\n", - "download_files = True\n", + "download_files = False\n", "\n", "\n", "if download_files:\n", @@ -567,7 +178,7 @@ " continue\n", "\n", " # INFO: This originally loaded in the procedures files, but is not necessary at this moment since i have them saved. Prior block now loads these files into same structure.\n", - " request = requests.get(f\"http://aind-metadata-service/procedures/{sample_id}\")\n", + " request = requests.get(f\"http://aind-metadata-service-dev/procedures/{sample_id}\")\n", " #TODO: check for invalid/missing models\n", "\n", " if request.status_code == 404 or request.status_code == 500:\n", @@ -670,63 +281,63 @@ "name": "stdout", "output_type": "stream", "text": [ - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '576404', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-07-12', 'experimenter_full_name': '28908', 'iacuc_protocol': '1806', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['576404'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2021-11-10 00:00:00 2021-12-03 00:00:00 576404 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2021-10-01 00:00:00 2021-10-11 00:00:00 576404 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2021-10-25 00:00:00 2021-11-03 00:00:00 576404 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '609105', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609105'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-05-05 00:00:00 2022-06-02 00:00:00 609105 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-01-21 00:00:00 2022-02-02 00:00:00 609105 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-02-03 00:00:00 2022-02-15 00:00:00 609105 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '609107', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609107'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 609107 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 609107 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 609107 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 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None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '609281', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-12-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 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'13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['609281'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 609281 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 609281 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 609281 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 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'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '614978', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614978'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': 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[{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '614980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['614980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 614980 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 614980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 614980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '615296', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['615296'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-07-21 00:00:00 2022-08-18 00:00:00 615296 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-04-12 00:00:00 2022-04-29 00:00:00 615296 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-05-05 00:00:00 2022-05-14 00:00:00 615296 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '603033', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2021-11-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2107', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['603033'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-06-16 00:00:00 2022-07-15 00:00:00 603033 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2021-12-26 00:00:00 2022-01-05 00:00:00 603033 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-01-05 00:00:00 2022-01-14 00:00:00 603033 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '618584', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618584'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-09-23 00:00:00 2022-10-26 00:00:00 618584 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-10 00:00:00 2022-06-23 00:00:00 618584 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-06-27 00:00:00 2022-07-14 00:00:00 618584 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '620631', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620631'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-08 00:00:00 2022-12-07 00:00:00 620631 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-21 00:00:00 2022-06-30 00:00:00 620631 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-07-06 00:00:00 2022-07-12 00:00:00 620631 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '620629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-04-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2104', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['620629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-09 00:00:00 2022-12-01 00:00:00 620629 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-06-21 00:00:00 2022-06-30 00:00:00 620629 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-07-06 00:00:00 2022-07-12 00:00:00 620629 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648860', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648860'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-01 00:00:00 2023-02-27 00:00:00 648860 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648860 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648860 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -734,26 +345,26 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 648860 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648861', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648861'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648861 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648861 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648861 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648858', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648858'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648858 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648858 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648858 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648862', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-26', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648862'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648862 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648862 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648862 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648077', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648077'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-09 00:00:00 2023-03-08 00:00:00 648077 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648077 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648077 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -761,32 +372,32 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 648077 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648079', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648079'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-06 00:00:00 648079 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648079 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648079 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 648079 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648698', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648698'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-06 00:00:00 648698 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648698 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648698 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 648698 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648699', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648699'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648699 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648699 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648700', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648700'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648700 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648700 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 648700 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648696', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648696'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-28 00:00:00 2023-06-03 00:00:00 648696 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648696 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648696 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -794,12 +405,12 @@ "2023-03-21 00:00:00 2023-03-21 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-05 00:00:00 2023-04-05 00:00:00 648696 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648695', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648695'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648695 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648695 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648697', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-09-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-10-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648697'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-28 00:00:00 2023-06-03 00:00:00 648697 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-07 00:00:00 2022-11-17 00:00:00 648697 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-11-22 00:00:00 2022-12-06 00:00:00 648697 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -807,7 +418,7 @@ "2023-03-21 00:00:00 2023-03-21 00:00:00 648697 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-05 00:00:00 2023-04-05 00:00:00 648697 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651324', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651324'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-23 00:00:00 2023-02-20 00:00:00 651324 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 651324 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -816,7 +427,7 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 651324 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 651324 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651327', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-10', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651327'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-01 00:00:00 2023-02-27 00:00:00 651327 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 651327 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -825,22 +436,22 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 651327 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '650008', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650008'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-05 00:00:00 650008 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650008 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650008 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 650008 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '650009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-08 00:00:00 2023-02-04 00:00:00 650009 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2022-12-19 00:00:00 2022-12-19 00:00:00 650009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0003_1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '650010', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650010'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-02-09 00:00:00 2023-03-08 00:00:00 650010 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650010 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650010 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -848,8 +459,8 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 650010 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '650011', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['650011'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-23 00:00:00 2023-02-20 00:00:00 650011 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-11-21 00:00:00 2022-12-05 00:00:00 650011 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-06 00:00:00 2022-12-18 00:00:00 650011 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -857,20 +468,20 @@ "2022-12-19 00:00:00 2022-12-19 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-06 00:00:00 2023-01-06 00:00:00 650011 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652779', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652779'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 652779 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 652779 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-02-13 00:00:00 2023-02-13 00:00:00 652779 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652781', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-24', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-06', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652781'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 652781 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 652781 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-02-13 00:00:00 2023-02-13 00:00:00 652781 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-22 00:00:00 648434 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -878,8 +489,8 @@ "2023-02-13 00:00:00 2023-02-13 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-30 00:00:00 2023-03-30 00:00:00 648434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648435', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648435'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-17 00:00:00 648435 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648435 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648435 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -887,14 +498,14 @@ "2023-02-13 00:00:00 2023-02-13 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-30 00:00:00 2023-03-30 00:00:00 648435 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '648436', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-25', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-30', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['648436'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 648436 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 648436 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-02-13 00:00:00 2023-02-13 00:00:00 648436 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651305', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651305'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 651305 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-15 00:00:00 2023-01-04 00:00:00 651305 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-04 00:00:00 2023-01-16 00:00:00 651305 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -902,7 +513,7 @@ "2023-02-13 00:00:00 2023-02-13 00:00:00 651305 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 651305 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653432', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653432'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653432 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653432 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -910,7 +521,7 @@ "2023-01-30 00:00:00 2023-01-30 00:00:00 653432 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rat anti-mTFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Goat anti-Rat IgG (H+L) AF 647', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 647', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-02-15 00:00:00 2023-02-15 00:00:00 653432 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat anti-Rat IgG (H+L) AF 647', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 647', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653430', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653430'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-03-13 00:00:00 2023-04-17 00:00:00 653430 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653430 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -919,7 +530,7 @@ "2023-01-30 00:00:00 2023-01-30 00:00:00 653430 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-02-15 00:00:00 2023-02-15 00:00:00 653430 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653431', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2002', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653431'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-03-13 00:00:00 2023-04-17 00:00:00 653431 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653431 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -928,8 +539,8 @@ "2023-01-30 00:00:00 2023-01-30 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-02-15 00:00:00 2023-02-15 00:00:00 653431 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653980', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653980'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653980 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653980 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653980 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -937,14 +548,14 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 653980 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '654727', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654727'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 654727 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 654727 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-03-07 00:00:00 2023-03-07 00:00:00 654727 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653981', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653981'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653981 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653981 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653981 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -952,8 +563,8 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 653981 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653159', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653159'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 653159 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653159 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653159 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -961,8 +572,8 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 653159 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653158', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653158'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-21 00:00:00 2023-05-17 00:00:00 653158 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 653158 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-21 00:00:00 2023-01-28 00:00:00 653158 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -970,7 +581,7 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 653158 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-30 00:00:00 2023-03-30 00:00:00 653158 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658734', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '658734', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658734'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 658734 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 658734 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -979,7 +590,7 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 658734 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 658734 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '658735', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['658735'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-04-23 00:00:00 2023-05-25 00:00:00 658735 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-01-13 00:00:00 2023-01-21 00:00:00 658735 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -988,22 +599,22 @@ "2023-03-07 00:00:00 2023-03-07 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-03-25 00:00:00 2023-03-25 00:00:00 658735 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '613814', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['613814'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-26 00:00:00 2023-02-16 00:00:00 613814 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-05 00:00:00 2022-12-14 00:00:00 613814 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-15 00:00:00 2022-12-23 00:00:00 613814 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-21 00:00:00 2023-01-21 00:00:00 613814 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '618583', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-02-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['618583'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-01-26 00:00:00 2023-02-16 00:00:00 618583 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2022-12-05 00:00:00 2022-12-14 00:00:00 618583 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2022-12-15 00:00:00 2022-12-23 00:00:00 618583 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-01-21 00:00:00 2023-01-21 00:00:00 618583 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_1', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '659146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 659146 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 659146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 659146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1011,8 +622,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 659146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '653153', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 300000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300007', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3216g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['653153'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 653153 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 653153 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 653153 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1020,7 +631,7 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 653153 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-19 00:00:00 2023-04-19 00:00:00 653153 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660629', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660629'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-11 00:00:00 2023-08-09 00:00:00 660629 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660629 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1029,7 +640,7 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660629 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 660629 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660630', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660630'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-11 00:00:00 2023-08-09 00:00:00 660630 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660630 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1038,8 +649,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 660630 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '657676', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-01', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['657676'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 657676 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 657676 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 657676 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1047,8 +658,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 657676 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660950', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660950'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 660950 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660950 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660950 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1056,8 +667,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 660950 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651895', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651895'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-15 00:00:00 2023-06-19 00:00:00 651895 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651895 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651895 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1065,8 +676,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-25 00:00:00 2023-04-25 00:00:00 651895 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '654306', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654306'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654306 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654306 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654306 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1074,8 +685,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-19 00:00:00 2023-04-19 00:00:00 654306 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '661300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 661300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 661300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 661300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1083,8 +694,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 661300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660949', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660949'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 660949 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 660949 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 660949 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1092,8 +703,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 660949 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '651897', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-27', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-12-19', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['651897'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-01 00:00:00 2023-08-09 00:00:00 651897 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 651897 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 651897 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1101,8 +712,8 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-06-13 00:00:00 2023-06-13 00:00:00 651897 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '654308', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['654308'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-05-10 00:00:00 2023-06-20 00:00:00 654308 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-03-02 00:00:00 2023-03-14 00:00:00 654308 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-03-14 00:00:00 2023-03-26 00:00:00 654308 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1110,57 +721,57 @@ "2023-04-02 00:00:00 2023-04-02 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-19 00:00:00 2023-04-19 00:00:00 654308 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_2', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665470', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665470'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665470 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665470 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665470 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '664761', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664761'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 664761 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 664761 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 664761 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665082', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665082'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665082 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665082 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665082 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665081', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665081'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 665081 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 665081 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 665081 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652441', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652441'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 652441 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 652441 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-04-27 00:00:00 2023-04-27 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tDT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 652441 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 652445 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 652445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 652445 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660625', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660625'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 660625 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 660625 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1168,7 +779,7 @@ "2023-04-27 00:00:00 2023-04-27 00:00:00 660625 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 660625 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '660627', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['660627'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-06-23 00:00:00 2023-07-21 00:00:00 660627 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-04-03 00:00:00 NaT 660627 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1179,8 +790,8 @@ "2023-04-03 00:00:00 NaT 516429 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-05-31 00:00:00 2023-05-31 00:00:00 516429 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674184', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674184'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674184 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674184 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674184 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1188,8 +799,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674184 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674190', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674190'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674190 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674190 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674190 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1197,8 +808,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674190 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674185', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674185'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674185 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674185 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674185 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1206,8 +817,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674185 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674191', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674191'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-25 00:00:00 2023-08-21 00:00:00 674191 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 674191 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 674191 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1215,7 +826,7 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 674191 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 674191 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '668294', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-04', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['668294'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 668294 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 668294 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1224,8 +835,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 668294 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667857', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-07', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-11', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667857'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 667857 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 667857 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 667857 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1233,8 +844,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 667857 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '669973', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669973'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669973 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669973 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669973 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1242,8 +853,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 669973 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '669977', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-22', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['669977'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-08-02 00:00:00 2023-09-02 00:00:00 669977 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-05-24 00:00:00 2023-06-07 00:00:00 669977 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-06-08 00:00:00 2023-06-18 00:00:00 669977 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1251,8 +862,8 @@ "2023-06-19 00:00:00 2023-06-19 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-07-06 00:00:00 2023-07-06 00:00:00 669977 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674743', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674743', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674743'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-12-11 00:00:00 NaT 674743 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 674743 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 674743 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1260,16 +871,16 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-11-20 00:00:00 2023-11-20 00:00:00 674743 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675061', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675061', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675061'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 675061 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 675061 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-08-09 00:00:00 2023-08-09 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-11-20 00:00:00 2023-11-20 00:00:00 675061 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667354', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667354', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667354'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 667354 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 667354 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 667354 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1277,8 +888,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 667354 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678116', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '678116', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678116'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 678116 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 678116 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 678116 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1286,8 +897,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 678116 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '661293', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '661293', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['661293'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-29 00:00:00 2023-10-26 00:00:00 661293 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-10 00:00:00 2023-07-20 00:00:00 661293 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-24 00:00:00 2023-08-04 00:00:00 661293 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1295,8 +906,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 661293 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '663412', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '663412', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663412'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-10 00:00:00 2023-12-14 00:00:00 663412 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 663412 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 663412 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1304,8 +915,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 663412 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675057', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675057', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675057'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-10 00:00:00 2023-12-14 00:00:00 675057 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 675057 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 675057 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1313,8 +924,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 675057 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '664762', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '664762', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-20', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['664762'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 664762 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 664762 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 664762 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1322,8 +933,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 664762 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667352', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667352', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300001', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4299g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667352'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 667352 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 667352 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 667352 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1331,8 +942,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 667352 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670944', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670944', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670944'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-04 00:00:00 2023-11-02 00:00:00 670944 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-14 00:00:00 2023-07-27 00:00:00 670944 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-07-28 00:00:00 2023-08-08 00:00:00 670944 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1340,8 +951,8 @@ "2023-08-09 00:00:00 2023-08-09 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 670944 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670471', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670471', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670471'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-07', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '18.0', 'animal_weight_post': '18.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-3.3', 'injection_coordinate_depth': ['4.0'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-06 00:00:00 2023-11-08 00:00:00 670471 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670471 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670471 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1349,8 +960,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 670471 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670339', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670339', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670339'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 670339 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670339 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670339 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1358,8 +969,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 670339 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670344', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670344', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670344'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-14', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.7', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.25'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '7.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 670344 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670344 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670344 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1367,8 +978,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Chicken Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Chicken Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_300798'), lot_number='GR361051-16', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 670344 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Chicken IgY (H+L) AF 488', source=JacksonLaboratory(name='Jackson Laboratory', abbreviation='JAX', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='021sy4w91'), rrid=PIDName(name='Donkey anti-Chicken IgY (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2340375'), lot_number='165794', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '681465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '681465', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681465'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '19.1', 'animal_weight_post': '19.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 5', 'procedures': [{'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '8.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 681465 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 681465 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 681465 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1376,8 +987,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 681465 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '681469', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '681469', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['681469'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '17.3', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': '10', 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.7', 'injection_coordinate_ap': '-0.34', 'injection_coordinate_depth': ['3.58'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['50.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 681469 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 681469 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 681469 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1385,8 +996,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 681469 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '676009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '676009', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676009'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-22', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '23.4', 'animal_weight_post': '23.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-09-27 00:00:00 2023-10-26 00:00:00 676009 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 676009 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 676009 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1394,8 +1005,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 676009 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '676007', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.00000000000000532907051820', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '676007', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-19', 'experimenter_full_name': '21228', 'iacuc_protocol': '2205', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['676007'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-26', 'experimenter_full_name': 'NSB-278', 'iacuc_protocol': '2205', 'animal_weight_prior': '24.2', 'animal_weight_post': '24.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '66.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '15.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.75', 'injection_coordinate_ap': '-1.34', 'injection_coordinate_depth': ['4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-02 00:00:00 2023-11-02 00:00:00 676007 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 676007 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 676007 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1403,8 +1014,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-09-07 00:00:00 2023-09-07 00:00:00 676007 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '671477', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 200000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '671477', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 200000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 200000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['671477'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 671477 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 671477 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 671477 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1412,8 +1023,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 671477 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670808', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670808', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670808'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 670808 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670808 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670808 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1421,8 +1032,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 670808 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '670809', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '670809', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-29', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'Ef1a-fDOI-eGFP PHP.eB', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'CAG-FLEX-tdTom PHP.eB', 'tars_identifiers': {'virus_tars_id': 'AiV300162', 'plasmid_tars_alias': None, 'prep_lot_number': 'v162851', 'prep_date': '2023-02-01', 'prep_type': None, 'prep_protocol': None}, 'addgene_id': None, 'titer': 5000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-01', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['670809'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-09 00:00:00 2023-12-14 00:00:00 670809 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-07-20 00:00:00 2023-08-02 00:00:00 670809 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-03 00:00:00 2023-08-14 00:00:00 670809 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1430,8 +1041,8 @@ "2023-08-15 00:00:00 2023-08-15 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None), Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-19 00:00:00 2023-10-19 00:00:00 670809 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None), Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645.0', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '674741', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '674741', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-28', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['674741'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 674741 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 674741 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 674741 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1439,8 +1050,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 674741 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659142', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '659142', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659142'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 659142 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 659142 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 659142 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1448,8 +1059,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 659142 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='#NO MATCH', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='unknown', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '663410', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '663410', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['663410'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 663410 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 663410 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 663410 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1457,7 +1068,7 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 663410 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 673998 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 673998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1466,8 +1077,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 673998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655147', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '655147', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655147'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 655147 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 655147 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 655147 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1475,7 +1086,7 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 655147 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-23', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 673996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 673996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", @@ -1484,8 +1095,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-6', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 673996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '665083', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '665083', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300005', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4360g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-03-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['665083'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-14 00:00:00 2023-12-14 00:00:00 665083 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 665083 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 665083 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1493,8 +1104,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 665083 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '652440', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '652440', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-10-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 30000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300023', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3215g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2022-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['652440'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-17 00:00:00 2023-12-22 00:00:00 652440 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-08-17 00:00:00 2023-08-29 00:00:00 652440 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-08-31 00:00:00 2023-09-12 00:00:00 652440 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1502,8 +1113,8 @@ "2023-09-13 00:00:00 2023-09-13 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-10-24 00:00:00 2023-10-24 00:00:00 652440 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit anti-Goat IgG (H+L) ATTO 565', source=AllenInstituteForNeuralDynamics(name='Allen Institute for Neural Dynamics', abbreviation='AIND', registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='04szwah67'), rrid=None, lot_number='AIAB_0001_4', expiration_date=None, immunolabel_class='Secondary', fluorophore='ATTO 565', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': None, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5311C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 487000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-10 00:00:00 2024-02-13 00:00:00 675375 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675375 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1511,8 +1122,8 @@ "2023-11-15 00:00:00 2023-11-15 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 675375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-31', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 444000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-05', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-10 00:00:00 2024-02-13 00:00:00 675374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1520,8 +1131,8 @@ "2023-11-15 00:00:00 2023-11-15 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-07 00:00:00 2023-12-07 00:00:00 675374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '675058', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '675058', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-25', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-30', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['675058'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-16 00:00:00 2023-10-27 00:00:00 675058 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-01 00:00:00 2023-11-14 00:00:00 675058 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "ORIGINAL SUBJ PROCEDURES: []\n", @@ -1540,16 +1151,16 @@ "2023-12-04 00:00:00 2023-12-04 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 109_03 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '655146', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655146'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 655146 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 655146 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 655146 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '655145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '655145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-11-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-01-11', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['655145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-12 00:00:00 2024-02-15 00:00:00 655145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 655145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 655145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1557,8 +1168,8 @@ "2023-12-04 00:00:00 2023-12-04 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 655145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '697837', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '697837', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697837'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-12 00:00:00 2024-02-15 00:00:00 697837 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 697837 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 697837 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1566,8 +1177,8 @@ "2023-12-04 00:00:00 2023-12-04 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 697837 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '697836', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '697836', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-09-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-10-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['697836'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-12 00:00:00 2024-03-12 00:00:00 697836 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-10-30 00:00:00 2023-11-10 00:00:00 697836 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-11-13 00:00:00 2023-11-22 00:00:00 697836 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1575,8 +1186,8 @@ "2023-12-04 00:00:00 2023-12-04 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 697836 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '686955', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '686955', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686955'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 686955 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 686955 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 686955 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1584,16 +1195,16 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 686955 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667998', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667998'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 667998 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 667998 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2023-12-22 00:00:00 2023-12-22 00:00:00 667998 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Alpaca anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Alpaca anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2827585'), lot_number='90221043AF1', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '686951', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '686951', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-07-05', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-09', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['686951'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 686951 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 686951 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 686951 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1601,8 +1212,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 686951 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667996', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667996'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 667996 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 667996 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 667996 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1610,8 +1221,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 667996 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '701772', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '701772', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701772'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 701772 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 701772 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 701772 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1619,8 +1230,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 701772 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673163', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673163', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673163'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-05 00:00:00 2024-03-06 00:00:00 673163 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 673163 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 673163 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1628,8 +1239,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 673163 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '659145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '659145', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2022-12-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 60000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300021', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3213g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-02-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['659145'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-31 00:00:00 2024-02-26 00:00:00 659145 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-21 00:00:00 2023-12-06 00:00:00 659145 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-07 00:00:00 2022-12-18 00:00:00 659145 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1637,8 +1248,8 @@ "2023-12-22 00:00:00 2023-12-22 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-10 00:00:00 2024-01-10 00:00:00 659145 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '701773', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '701773', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-11-13', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['701773'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 701773 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 701773 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 701773 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1646,8 +1257,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 701773 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678794', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '678794', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300006', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4300g', 'prep_date': '2022-09-15', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678794'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 678794 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 678794 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 678794 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1655,8 +1266,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 678794 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 500000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 673161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 673161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 673161 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1664,8 +1275,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 673161 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '678112', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '678112', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-05-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['678112'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 678112 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 678112 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 678112 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1673,8 +1284,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 678112 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '667997', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '667997', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-03-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['667997'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 667997 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 667997 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 667997 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1682,8 +1293,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 667997 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '673157', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '673157', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-04-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300002', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4359g', 'prep_date': '2022-09-21', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-05-17', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['673157'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-02 00:00:00 2024-03-05 00:00:00 673157 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-11-20 00:00:00 2023-12-06 00:00:00 673157 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-12-06 00:00:00 2023-12-19 00:00:00 673157 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1691,8 +1302,8 @@ "2023-12-21 00:00:00 2023-12-21 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-09 00:00:00 2024-01-09 00:00:00 673157 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2541645', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708373', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708373', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708373'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708373 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708373 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1700,8 +1311,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708373 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708370', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708370', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708370'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708370 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708370 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1709,8 +1320,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708370 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708374', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1791 - MGT_E255', 'tars_identifiers': {'virus_tars_id': 'AiV1791_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT254C', 'prep_date': '2023-08-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708374'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708374 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708374 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1718,8 +1329,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708374 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708368', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708368', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708368'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708368 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708368 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1727,8 +1338,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708368 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708369', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708369', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E256 - AiP1836', 'tars_identifiers': {'virus_tars_id': 'AiV1836_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5315C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708369'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708369 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708369 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1736,8 +1347,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708369 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708375', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708375'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708375 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708375 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1745,8 +1356,8 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708375 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708376', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708376', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'eHGT_607h - CN4762', 'tars_identifiers': {'virus_tars_id': 'AiV14762_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5598C', 'prep_date': '2023-04-27', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708376'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-26 00:00:00 NaT 708376 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 708376 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1754,13 +1365,13 @@ "2024-01-12 00:00:00 2024-01-12 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-01-30 00:00:00 2024-01-30 00:00:00 708376 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '705161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 100000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '705161', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 100000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 100000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['705161'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-12 00:00:00 2024-02-11 00:00:00 705161 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-08 00:00:00 2023-12-21 00:00:00 705161 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2023-01-02 00:00:00 2024-01-12 00:00:00 705161 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '685221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '685221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 685221 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 685221 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 685221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1768,8 +1379,8 @@ "2024-01-25 00:00:00 2024-01-25 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-12 00:00:00 2024-02-12 00:00:00 685221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '685222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '685222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-23', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-tdTomato', 'tars_identifiers': {'virus_tars_id': 'AiV300008', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5048g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['685222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-11 00:00:00 NaT 685222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 685222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 685222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1777,8 +1388,8 @@ "2024-01-25 00:00:00 2024-01-25 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-12 00:00:00 2024-02-12 00:00:00 685222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '684101', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '684101', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684101'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-11 00:00:00 NaT 684101 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 684101 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 684101 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1786,8 +1397,8 @@ "2024-01-25 00:00:00 2024-01-25 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-12 00:00:00 2024-02-12 00:00:00 684101 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '684100', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '684100', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-20', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 6000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-08-02', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['684100'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 684100 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 684100 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 684100 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1795,8 +1406,8 @@ "2024-01-25 00:00:00 2024-01-25 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-12 00:00:00 2024-02-12 00:00:00 684100 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '708365', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '708365', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-10-27', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AiP1837 - MGT_E252', 'tars_identifiers': {'virus_tars_id': 'AiV1837_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5316C', 'prep_date': '2023-03-08', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300010', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5353g', 'prep_date': '2023-03-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-7x-TRE-3x-EGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300011', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5415g', 'prep_date': '2023-03-14', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-01', 'experimenter_full_name': '30509', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['708365'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-01 00:00:00 2024-03-27 00:00:00 708365 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2023-12-12 00:00:00 2023-12-21 00:00:00 708365 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-04 00:00:00 2024-01-18 00:00:00 708365 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1822,8 +1433,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 709394 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709222', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709222'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-26 00:00:00 NaT 709222 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709222 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709222 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1831,8 +1442,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 709222 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709221', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709221'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-21 00:00:00 NaT 709221 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709221 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709221 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1840,8 +1451,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 709221 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709220', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709220', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-29', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-03', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709220'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-26 00:00:00 NaT 709220 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 709220 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 709220 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1849,8 +1460,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 709220 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Goat IgG (H+L) AF 568', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Goat IgG (H+L) AF 568', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2534104'), lot_number='2304269', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 568', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '706434', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706434'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-26 00:00:00 NaT 706434 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706434 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706434 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1858,8 +1469,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 706434 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '706300', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706300'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-15 00:00:00 NaT 706300 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706300 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706300 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1867,8 +1478,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 706300 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '706301', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '706301', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-15', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['706301'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-21 00:00:00 NaT 706301 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 706301 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 706301 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1876,41 +1487,24 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 706301 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703071', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '703071', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703071'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '17.5', 'animal_weight_post': '17.3', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '120.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703071 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703071 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-05 00:00:00 2024-02-05 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-02-22 00:00:00 2024-02-22 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ - "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", - " return self.__pydantic_serializer__.to_json(\n" - ] - }, - { - "name": "stdout", - "output_type": "stream", - "text": [ - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703066', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "2024-02-22 00:00:00 2024-02-22 00:00:00 703071 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '703066', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703066'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-18', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.1', 'animal_weight_post': '21.2', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 3', 'procedures': [{'injection_materials': [], 'recovery_time': '4.482', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': None, 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': None, 'duration_unit': 'minute', 'level': None}, 'workstation_id': None, 'procedures': [{'injection_materials': [], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703066 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703066 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-02-05 00:00:00 2024-02-05 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 703066 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703070', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.00000000000000266453525910', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '703070', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703070'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-19', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '15.9', 'animal_weight_post': '15.9', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '78.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-21 00:00:00 NaT 703070 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703070 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703070 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1918,8 +1512,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 703070 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '703067', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '703067', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-11', 'experimenter_full_name': '30424', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['703067'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-09-29', 'experimenter_full_name': 'NSB-5356', 'iacuc_protocol': '2109', 'animal_weight_prior': '22.4', 'animal_weight_post': '22.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 4', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-1.5', 'injection_coordinate_ap': '2.5', 'injection_coordinate_depth': ['-0.7'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['40.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.6', 'injection_coordinate_ap': '-5.6', 'injection_coordinate_depth': ['-4.5'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['300.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-15 00:00:00 NaT 703067 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-05 00:00:00 2024-01-18 00:00:00 703067 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-01-22 00:00:00 2024-02-01 00:00:00 703067 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1927,8 +1521,8 @@ "2024-02-05 00:00:00 2024-02-05 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-02-22 00:00:00 2024-02-22 00:00:00 703067 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2330673', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709839', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709839', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709839'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709839 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709839 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", @@ -1944,16 +1538,33 @@ "2024-02-23 00:00:00 2024-02-23 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-11 00:00:00 2024-03-11 00:00:00 709013 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '709838', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '709838', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-12-04', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 5000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300004', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5047g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['709838'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 709838 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 709838 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-01 00:00:00 2024-03-01 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "2024-03-18 00:00:00 2024-03-18 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704523', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "2024-03-18 00:00:00 2024-03-18 00:00:00 709838 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n" + ] + }, + { + "name": "stderr", + "output_type": "stream", + "text": [ + "c:\\Users\\mae.moninghoff\\AppData\\Local\\miniconda3\\envs\\ainds\\Lib\\site-packages\\pydantic\\main.py:352: UserWarning: Pydantic serializer warnings:\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " Expected `Union[Surgery, TrainingProtocol, WaterRestriction, definition-ref]` but got `dict` - serialized value may not be as expected\n", + " return self.__pydantic_serializer__.to_json(\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '704523', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704523'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-04 00:00:00 NaT 704523 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704523 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704523 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -1978,8 +1589,8 @@ "2024-02-23 00:00:00 2024-02-23 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-03-18 00:00:00 2024-03-18 00:00:00 713600 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704521', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '704521', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704521'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704521 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704521 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", @@ -2003,8 +1614,8 @@ "2024-03-01 00:00:00 2024-03-01 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", "2024-03-18 00:00:00 2024-03-18 00:00:00 709016 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('40.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '704522', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '704522', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-11-06', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-07', 'experimenter_full_name': '31079', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['704522'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-04 00:00:00 NaT 704522 SpecimenProcedureType.GELATION Gelation None ['dx.doi.org/10.17504/protocols.io.n92ldpwjxl5b/v1'] None\n", "2024-01-30 00:00:00 2024-02-12 00:00:00 704522 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-02-13 00:00:00 2024-02-22 00:00:00 704522 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", @@ -2012,44 +1623,44 @@ "2024-03-01 00:00:00 2024-03-01 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303395'), lot_number='1037873-7', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "[Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", "2024-03-11 00:00:00 2024-03-11 00:00:00 704522 SpecimenProcedureType.IMMUNOLABELING Secondary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Donkey anti-Rabbit IgG (H+L) AF 488', source=Thermofisher(name='Thermo Fisher', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='03x1ewr52'), rrid=PIDName(name='Donkey anti-Rabbit IgG (H+L) AF 488', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_2535792'), lot_number='2668665', expiration_date=None, immunolabel_class='Secondary', fluorophore='Alexa Fluor 488', mass=Decimal('20.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '715347', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '715347', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715347'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 715347 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 715347 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 715347 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '719652', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '719652', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719652'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 719652 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 719652 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 719652 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '719654', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '719654', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-10', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E265', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-14', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['719654'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 719654 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 719654 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 719654 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '715345', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '715345', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715345'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 715345 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 715345 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 715345 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Goat Anti-tdT', source=Other(name='Other', abbreviation=None, registry=None, registry_identifier=None), rrid=None, lot_number='0081030221', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '717445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '717445', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717445'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 717445 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 717445 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 717445 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '717444', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '717444', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717444'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 717444 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 717444 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", "2024-03-22 00:00:00 2024-03-22 00:00:00 717444 SpecimenProcedureType.IMMUNOLABELING Primary Antibody Immunolabeling None ['dx.doi.org/10.17504/protocols.io.ewov1okwylr2/v1'] [Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", - "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.11.5', 'subject_id': '712228', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", - "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '712228', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712228'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '18.6', 'animal_weight_post': '18.6', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '45.00', 'duration_unit': 'minute', 'level': '1.75'}, 'workstation_id': 'SWS 6', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': None, 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-02-27 00:00:00 2024-03-07 00:00:00 712228 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-03-08 00:00:00 2024-03-19 00:00:00 712228 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", "[Antibody(name='Rabbit Anti-GFP', source=Abcam(name='Abcam', abbreviation=None, registry=ResearchOrganizationRegistry(name='Research Organization Registry', abbreviation='ROR'), registry_identifier='02e1wjw63'), rrid=PIDName(name='Rabbit Anti-GFP', abbreviation=None, registry=ResearchResourceIdentifiers(name='Research Resource Identifiers', abbreviation='RRID'), registry_identifier='AB_303396'), lot_number='GR3431263-1', expiration_date=None, immunolabel_class='Primary', fluorophore=None, mass=Decimal('10.0'), mass_unit=, notes=None)]\n", @@ -2063,42 +1674,55 @@ "ORIGINAL SUBJ PROCEDURES: []\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 709014 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 709014 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '717443', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717443'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-02', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E241 / AiP2015 / GT250C', 'tars_identifiers': {'virus_tars_id': 'AiV2015_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT250C', 'prep_date': '2023-07-25', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300022', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3212g', 'prep_date': '2022-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-07', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717443'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 717443 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 717443 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '715346', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715346'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-08', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'MGT_E199 / AiP1996 / GT232C', 'tars_identifiers': {'virus_tars_id': 'AiV1996_PHPeB', 'plasmid_tars_alias': None, 'prep_lot_number': 'GT232C', 'prep_date': '2023-07-21', 'prep_type': 'Crude', 'prep_protocol': 'PHPeB-SOP#VC004'}, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'PhP.EB-Syn-Flex-TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-tDTomato', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['715346'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 715346 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 715346 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '712226', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712226'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['712226'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-12-21', 'experimenter_full_name': 'NSB-90', 'iacuc_protocol': '2109', 'animal_weight_prior': '21.5', 'animal_weight_post': '21.4', 'weight_unit': 'gram', 'anaesthesia': {'type': 'isoflurane', 'duration': '60.0', 'duration_unit': 'minute', 'level': '1.5'}, 'workstation_id': 'SWS 2', 'procedures': [{'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '-0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Left', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}, {'injection_materials': [], 'recovery_time': '10.0', 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'injection_coordinate_ml': '0.4', 'injection_coordinate_ap': '-1.6', 'injection_coordinate_depth': ['3.3'], 'injection_coordinate_unit': 'millimeter', 'injection_coordinate_reference': 'Bregma', 'bregma_to_lambda_distance': None, 'bregma_to_lambda_unit': 'millimeter', 'injection_angle': '0.0', 'injection_angle_unit': 'degrees', 'targeted_structure': None, 'injection_hemisphere': 'Right', 'procedure_type': 'Nanoject injection', 'injection_volume': ['100.0'], 'injection_volume_unit': 'nanoliter', 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 712226 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 712226 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '718162', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718162'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718162'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 718162 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 718162 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '718168', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718168'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-31', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-06', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['718168'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-03-13 00:00:00 2024-03-29 00:00:00 718168 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "2024-04-01 00:00:00 NaT 718168 SpecimenProcedureType.DELIPIDATION SBiP Delipidation None ['dx.doi.org/10.17504/protocols.io.n2bvj81mwgk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '683791', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-07-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['683791'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2023-06-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300024', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT3214g', 'prep_date': '2023-02-04', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': {'virus_tars_id': 'AiV300003', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT5046g', 'prep_date': '2023-02-07', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 1800000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2023-07-21', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['683791'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-03 00:00:00 NaT 683791 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '720165', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['720165'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-02-12', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-18', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['720165'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-03 00:00:00 NaT 720165 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '717614', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-01-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB-TRE-DIO-MORF-IRES-tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717614'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB-TRE-DIO-MORF-IRES-tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 50000000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 10000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_TREx7-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717614'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-03 00:00:00 NaT 717614 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 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'SOP#VC003'}, 'addgene_id': None, 'titer': 50000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['721056'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 50000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['721056'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-03 00:00:00 NaT 721056 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", "ORIGINAL SUBJ PROCEDURES: []\n", "2024-04-03 00:00:00 NaT 719179 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "ORIGINAL SUBJ PROCEDURES: []\n", + "OG FILE: {'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py', 'schema_version': '0.13.3', 'subject_id': '721059', 'subject_procedures': [{'procedure_type': 'Surgery', 'start_date': '2024-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB_Syn-Flex TRE-2tTA', 'tars_identifiers': {'virus_tars_id': 'AiV300000', 'plasmid_tars_alias': None, 'prep_lot_number': 'VT4358g', 'prep_date': '2022-09-23', 'prep_type': 'Purified', 'prep_protocol': 'SOP#VC003'}, 'addgene_id': None, 'titer': 50000000000, 'titer_unit': 'gc/mL'}, {'material_type': 'Virus', 'name': 'AAV-PHP-eB_7x-TRE-3xGFP', 'tars_identifiers': None, 'addgene_id': None, 'titer': 18000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-22', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['721059'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-02-16', 'experimenter_full_name': '13040', 'iacuc_protocol': '2109', 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None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB-TRE-DIO-MORF-IRES-tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 100000000000000, 'titer_unit': 'gc/mL'}]}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717612'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}], 'specimen_procedures': [], 'notes': None}\n", + "ORIGINAL SUBJ PROCEDURES: [{'procedure_type': 'Surgery', 'start_date': '2024-01-26', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'recovery_time': None, 'recovery_time_unit': 'minute', 'injection_duration': None, 'injection_duration_unit': 'minute', 'instrument_id': None, 'procedure_type': 'Retro-orbital injection', 'injection_volume': None, 'injection_volume_unit': 'microliter', 'injection_eye': None, 'injection_materials': [{'material_type': 'Virus', 'name': 'AAV-PHP-eB-TRE-DIO-MORF-IRES-tTA', 'tars_identifiers': None, 'addgene_id': None, 'titer': 100000000000000, 'titer_unit': 'gc/mL'}], 'protocol_id': 'unknown'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}, {'procedure_type': 'Surgery', 'start_date': '2024-03-08', 'experimenter_full_name': '30333', 'iacuc_protocol': '2109', 'animal_weight_prior': None, 'animal_weight_post': None, 'weight_unit': 'gram', 'anaesthesia': None, 'workstation_id': None, 'procedures': [{'procedure_type': 'Perfusion', 'output_specimen_ids': ['717612'], 'protocol_id': 'dx.doi.org/10.17504/protocols.io.bg5vjy66'}], 'notes': None, 'protocol_id': 'dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1'}]\n", "2024-04-03 00:00:00 NaT 717612 SpecimenProcedureType.DELIPIDATION DCM Delipidation None ['dx.doi.org/10.17504/protocols.io.36wgqj1kxvk5/v1'] None\n", - "{'Sicgen', 'Abcam', 'Thermo Fisher', 'Invitrogen', 'Jackson Immuno'}\n" + "{'Thermo Fisher', 'Sicgen', 'Invitrogen', 'Jackson Immuno', 'Abcam'}\n" ] } ], From 0a21a8fcba18ce19545aac3553643088b9a10341 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Wed, 29 May 2024 19:25:07 -0400 Subject: [PATCH 41/43] new updates --- .../576404_procedures.json | 2 +- .../603033_procedures.json | 2 +- .../609105_procedures.json | 22 +-- .../609107_procedures.json | 22 +-- .../609281_procedures.json | 22 +-- .../613814_procedures.json | 22 +-- .../614978_procedures.json | 22 +-- .../614980_procedures.json | 22 +-- .../615296_procedures.json | 22 +-- .../618583_procedures.json | 22 +-- .../618584_procedures.json | 22 +-- .../620629_procedures.json | 2 +- .../620631_procedures.json | 2 +- .../648077_procedures.json | 31 ++-- .../648079_procedures.json | 31 ++-- .../648434_procedures.json | 40 +++-- .../648435_procedures.json | 40 +++-- .../648436_procedures.json | 40 +++-- .../648695_procedures.json | 40 +++-- .../648696_procedures.json | 40 +++-- .../648697_procedures.json | 40 +++-- .../648698_procedures.json | 40 +++-- .../648699_procedures.json | 40 +++-- .../648700_procedures.json | 40 +++-- .../648858_procedures.json | 40 +++-- .../648860_procedures.json | 40 +++-- .../648861_procedures.json | 40 +++-- .../648862_procedures.json | 40 +++-- .../650008_procedures.json | 40 +++-- .../650009_procedures.json | 40 +++-- .../650010_procedures.json | 40 +++-- 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.../660629_procedures.json | 2 +- .../660630_procedures.json | 2 +- .../660949_procedures.json | 31 ++-- .../660950_procedures.json | 31 ++-- .../661300_procedures.json | 31 ++-- .../664761_procedures.json | 31 ++-- .../665081_procedures.json | 31 ++-- .../665082_procedures.json | 31 ++-- .../665465_procedures.json | 31 ++-- .../665470_procedures.json | 31 ++-- .../667857_procedures.json | 31 ++-- .../668294_procedures.json | 2 +- .../669973_procedures.json | 31 ++-- .../669977_procedures.json | 31 ++-- .../674184_procedures.json | 49 +++-- .../674185_procedures.json | 40 +++-- .../674190_procedures.json | 49 +++-- .../674191_procedures.json | 40 +++-- .../original_spec_files/576404_invalid.json | 2 +- .../original_spec_files/603033_invalid.json | 2 +- .../original_spec_files/609105_invalid.json | 2 +- .../original_spec_files/609107_invalid.json | 2 +- .../original_spec_files/609281_invalid.json | 2 +- .../original_spec_files/613814_invalid.json | 2 +- 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diff --git a/scripts/Exaspim_ingest/original_plus_materials/576404_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/576404_procedures.json index b13e5db9..dcecd33c 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/576404_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/576404_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "576404", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/603033_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/603033_procedures.json index ae475bbd..94924310 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/603033_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/603033_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "603033", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/609105_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/609105_procedures.json index 6feae684..a657b8e1 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/609105_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/609105_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "609105", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,16 +41,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/609107_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/609107_procedures.json index 5310ed56..a04248ce 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/609107_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/609107_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "609107", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,16 +41,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/609281_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/609281_procedures.json index 9e9318cb..4cf06cc4 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/609281_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/609281_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "609281", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,16 +41,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/613814_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/613814_procedures.json index 3a4eb29c..5f306465 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/613814_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/613814_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "613814", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,16 +41,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/614978_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/614978_procedures.json index 25deb134..3f7506f0 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/614978_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/614978_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "614978", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,16 +41,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/614980_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/614980_procedures.json index 32790eb1..68a0fb55 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/614980_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/614980_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "614980", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,16 +41,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/615296_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/615296_procedures.json index 3fdc3c5e..1c18a0c8 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/615296_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/615296_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "615296", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,16 +41,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/618583_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/618583_procedures.json index 9d55730c..1b917583 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/618583_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/618583_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "618583", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,16 +41,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/618584_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/618584_procedures.json index 3fd03e40..f587fef7 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/618584_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/618584_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "618584", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,16 +41,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/620629_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/620629_procedures.json index 85c01319..86a65276 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/620629_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/620629_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "620629", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/620631_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/620631_procedures.json index 36d9a05d..802d7d23 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/620631_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/620631_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "620631", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/648077_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648077_procedures.json index 5d4201ce..486c1c86 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648077_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648077_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648077", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648079_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648079_procedures.json index ae40c101..0e898cce 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648079_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648079_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648079", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648434_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648434_procedures.json index 4fbf9cf9..10250e12 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648434_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648434_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648434", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648435_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648435_procedures.json index e1e8ec63..ca24214d 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648435_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648435_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648435", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648436_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648436_procedures.json index 4e7d6e01..0c02dd7b 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648436_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648436_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648436", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648695_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648695_procedures.json index 9f1e2a64..7ef2c33a 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648695_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648695_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648695", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648696_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648696_procedures.json index 2b08a5f8..e373200d 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648696_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648696_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648696", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648697_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648697_procedures.json index a198bcaa..7d4c13b3 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648697_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648697_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648697", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648698_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648698_procedures.json index 7f1e844b..15feba84 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648698_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648698_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648698", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648699_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648699_procedures.json index be703b0c..e15b596c 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648699_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648699_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648699", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648700_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648700_procedures.json index b0d85b57..beefc1c3 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648700_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648700_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648700", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648858_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648858_procedures.json index 213eb269..1ac4f696 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648858_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648858_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648858", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648860_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648860_procedures.json index 07b032b8..4a939c94 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648860_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648860_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648860", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648861_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648861_procedures.json index eb2642fc..0bf32bf8 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648861_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648861_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648861", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/648862_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/648862_procedures.json index 463e563b..83b1b3cc 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/648862_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/648862_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "648862", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/650008_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/650008_procedures.json index a2dc58b5..7414aa64 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/650008_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/650008_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "650008", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/650009_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/650009_procedures.json index 735cd190..fb741b54 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/650009_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/650009_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "650009", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/650010_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/650010_procedures.json index fbb6f7b3..3a444f92 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/650010_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/650010_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "650010", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/650011_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/650011_procedures.json index 99cdf711..9bb34e70 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/650011_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/650011_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "650011", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/651305_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/651305_procedures.json index e72da93a..5f7bb547 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/651305_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/651305_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "651305", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/651324_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/651324_procedures.json index 8b0f69e7..6b245e4c 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/651324_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/651324_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "651324", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/651327_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/651327_procedures.json index 3fbd6001..69479cdd 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/651327_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/651327_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "651327", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/651895_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/651895_procedures.json index a097dae7..dd286483 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/651895_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/651895_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "651895", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/651897_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/651897_procedures.json index 3c09cda6..1162f254 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/651897_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/651897_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "651897", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/652441_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/652441_procedures.json index 932265a4..af1b4145 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/652441_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/652441_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "652441", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/652445_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/652445_procedures.json index 44092b65..e5a8dd64 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/652445_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/652445_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "652445", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/652779_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/652779_procedures.json index 94056db5..6f455629 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/652779_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/652779_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "652779", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/652781_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/652781_procedures.json index 54fb435e..e5dee8c1 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/652781_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/652781_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "652781", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/653153_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/653153_procedures.json index 51f1c7a5..475d35a1 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/653153_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/653153_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "653153", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/653158_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/653158_procedures.json index 96610623..83adc083 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/653158_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/653158_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "653158", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/653159_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/653159_procedures.json index 33f70a78..8efe2c0b 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/653159_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/653159_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "653159", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/653430_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/653430_procedures.json index bbfa299e..fbe8f344 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/653430_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/653430_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "653430", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/653431_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/653431_procedures.json index c56c179b..9d9abb2a 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/653431_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/653431_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "653431", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/653432_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/653432_procedures.json index b6b74d67..86ee9e87 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/653432_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/653432_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "653432", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/653980_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/653980_procedures.json index 322460e7..fdff4fd6 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/653980_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/653980_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "653980", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/653981_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/653981_procedures.json index 09ec95c4..a67f2bd0 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/653981_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/653981_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "653981", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/654306_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/654306_procedures.json index f84c5a96..8c744d5c 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/654306_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/654306_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "654306", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/654308_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/654308_procedures.json index 2d37e950..c86da4d7 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/654308_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/654308_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "654308", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/654727_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/654727_procedures.json index 8a0d971b..b0019741 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/654727_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/654727_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "654727", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -27,21 +43,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/657676_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/657676_procedures.json index e9208e00..ee231162 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/657676_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/657676_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "657676", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/658734_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/658734_procedures.json index 71982791..45ac1018 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/658734_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/658734_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "658734", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/658735_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/658735_procedures.json index aa441775..9f0a9154 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/658735_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/658735_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "658735", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/659146_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/659146_procedures.json index 5d2021d7..73bb6285 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/659146_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/659146_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "659146", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 60000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/660625_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/660625_procedures.json index 299924b9..aaca7b9a 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/660625_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/660625_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "660625", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/660627_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/660627_procedures.json index 3e7ecce2..1839d7fa 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/660627_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/660627_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "660627", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/660629_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/660629_procedures.json index b1f6058c..03fab667 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/660629_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/660629_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "660629", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/660630_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/660630_procedures.json index 7211c290..32107eee 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/660630_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/660630_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "660630", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/660949_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/660949_procedures.json index d47f8561..a538d3a7 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/660949_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/660949_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "660949", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/660950_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/660950_procedures.json index 34929ed1..eb7615db 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/660950_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/660950_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "660950", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/661300_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/661300_procedures.json index 87aec01f..521b8ff6 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/661300_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/661300_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "661300", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/664761_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/664761_procedures.json index 007d07ac..47e4aff9 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/664761_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/664761_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "664761", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/665081_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/665081_procedures.json index 51d51d56..44fa84a4 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/665081_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/665081_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "665081", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 60000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/665082_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/665082_procedures.json index 69fac394..b17cbbcd 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/665082_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/665082_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "665082", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 60000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/665465_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/665465_procedures.json index 40ec5aa9..fb05bea5 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/665465_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/665465_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "665465", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/665470_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/665470_procedures.json index 1a78e33a..7373c5f5 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/665470_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/665470_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "665470", "subject_procedures": [ { @@ -37,11 +37,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -61,16 +77,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/667857_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/667857_procedures.json index 6df4c560..6ca6a467 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/667857_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/667857_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "667857", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 60000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/668294_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/668294_procedures.json index d1aabf9b..a619572e 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/668294_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/668294_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "668294", "subject_procedures": [ { diff --git a/scripts/Exaspim_ingest/original_plus_materials/669973_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/669973_procedures.json index 4bd0d515..1a2de8ff 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/669973_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/669973_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "669973", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/669977_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/669977_procedures.json index 2e13faf6..e9d790a1 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/669977_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/669977_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "669977", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1000000000, "titer_unit": "gc/mL" @@ -39,16 +55,7 @@ "titer": 1800000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/674184_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/674184_procedures.json index 0bd12495..81034a1d 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/674184_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/674184_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "674184", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AiP1837 - MGT_E252", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV1837_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5316C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, "addgene_id": null, "titer": 444000000000000, "titer_unit": "gc/mL" @@ -27,7 +43,14 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 10000000000, "titer_unit": "gc/mL" @@ -35,21 +58,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/674185_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/674185_procedures.json index 35cd72e5..cd479bfb 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/674185_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/674185_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "674185", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -34,7 +43,14 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 10000000000, "titer_unit": "gc/mL" @@ -42,21 +58,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/674190_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/674190_procedures.json index 394dd254..1c474f76 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/674190_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/674190_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "674190", "subject_procedures": [ { @@ -15,11 +15,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AiP1837 - MGT_E252", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV1837_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5316C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, "addgene_id": null, "titer": 444000000000000, "titer_unit": "gc/mL" @@ -27,7 +43,14 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 10000000000, "titer_unit": "gc/mL" @@ -35,21 +58,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_plus_materials/674191_procedures.json b/scripts/Exaspim_ingest/original_plus_materials/674191_procedures.json index 177bd872..c84ac600 100644 --- a/scripts/Exaspim_ingest/original_plus_materials/674191_procedures.json +++ b/scripts/Exaspim_ingest/original_plus_materials/674191_procedures.json @@ -1,6 +1,6 @@ { "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.11.5", + "schema_version": "0.13.3", "subject_id": "674191", "subject_procedures": [ { @@ -15,6 +15,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -34,7 +43,14 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 10000000000, "titer_unit": "gc/mL" @@ -42,21 +58,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } - ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null + ] } ], "notes": null, diff --git a/scripts/Exaspim_ingest/original_spec_files/576404_invalid.json b/scripts/Exaspim_ingest/original_spec_files/576404_invalid.json index 75c67993..e27f23e3 100644 --- a/scripts/Exaspim_ingest/original_spec_files/576404_invalid.json +++ b/scripts/Exaspim_ingest/original_spec_files/576404_invalid.json @@ -1 +1 @@ -{"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", "schema_version": "0.11.5", "subject_id": "576404", "subject_procedures": [{"procedure_type": "Surgery", "start_date": "2021-07-12", "experimenter_full_name": "28908", "iacuc_protocol": "1806", "animal_weight_prior": null, "animal_weight_post": null, "weight_unit": "gram", "anaesthesia": null, "workstation_id": 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index ac258e88..4b2bad11 100644 --- a/scripts/Exaspim_ingest/output/109_11_procedures.json +++ b/scripts/Exaspim_ingest/output/109_11_procedures.json @@ -143,5 +143,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/516429_procedures.json b/scripts/Exaspim_ingest/output/516429_procedures.json index 912c97a4..76ac1faa 100644 --- a/scripts/Exaspim_ingest/output/516429_procedures.json +++ b/scripts/Exaspim_ingest/output/516429_procedures.json @@ -71,5 +71,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/576404_procedures.json b/scripts/Exaspim_ingest/output/576404_procedures.json index e08d3c74..979496ec 100644 --- a/scripts/Exaspim_ingest/output/576404_procedures.json +++ b/scripts/Exaspim_ingest/output/576404_procedures.json @@ -76,5 +76,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/603033_procedures.json b/scripts/Exaspim_ingest/output/603033_procedures.json index 31ae6eb5..c540bc06 100644 --- a/scripts/Exaspim_ingest/output/603033_procedures.json +++ b/scripts/Exaspim_ingest/output/603033_procedures.json @@ -76,5 +76,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/609105_procedures.json b/scripts/Exaspim_ingest/output/609105_procedures.json index 67d46528..52981d27 100644 --- a/scripts/Exaspim_ingest/output/609105_procedures.json +++ b/scripts/Exaspim_ingest/output/609105_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -31,15 +40,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -121,5 +121,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/609107_procedures.json b/scripts/Exaspim_ingest/output/609107_procedures.json index 6be392d0..d621fd0a 100644 --- a/scripts/Exaspim_ingest/output/609107_procedures.json +++ b/scripts/Exaspim_ingest/output/609107_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -31,15 +40,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -121,5 +121,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/609281_procedures.json b/scripts/Exaspim_ingest/output/609281_procedures.json index ddb65b6c..8e84b210 100644 --- a/scripts/Exaspim_ingest/output/609281_procedures.json +++ b/scripts/Exaspim_ingest/output/609281_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -31,15 +40,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -121,5 +121,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/613814_procedures.json b/scripts/Exaspim_ingest/output/613814_procedures.json index 4a7db00b..e87a5fee 100644 --- a/scripts/Exaspim_ingest/output/613814_procedures.json +++ b/scripts/Exaspim_ingest/output/613814_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -31,15 +40,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -158,5 +158,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/614978_procedures.json b/scripts/Exaspim_ingest/output/614978_procedures.json index b9a0d4f0..2670e4a7 100644 --- a/scripts/Exaspim_ingest/output/614978_procedures.json +++ b/scripts/Exaspim_ingest/output/614978_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -31,15 +40,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -121,5 +121,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/614980_procedures.json b/scripts/Exaspim_ingest/output/614980_procedures.json index bdb9445b..549b624e 100644 --- a/scripts/Exaspim_ingest/output/614980_procedures.json +++ b/scripts/Exaspim_ingest/output/614980_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -31,15 +40,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -121,5 +121,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/615296_procedures.json b/scripts/Exaspim_ingest/output/615296_procedures.json index 645107bd..c935e13b 100644 --- a/scripts/Exaspim_ingest/output/615296_procedures.json +++ b/scripts/Exaspim_ingest/output/615296_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -31,15 +40,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -121,5 +121,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/618583_procedures.json b/scripts/Exaspim_ingest/output/618583_procedures.json index 00553916..85af4d43 100644 --- a/scripts/Exaspim_ingest/output/618583_procedures.json +++ b/scripts/Exaspim_ingest/output/618583_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -31,15 +40,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -158,5 +158,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/618584_procedures.json b/scripts/Exaspim_ingest/output/618584_procedures.json index 4fe78b34..02733529 100644 --- a/scripts/Exaspim_ingest/output/618584_procedures.json +++ b/scripts/Exaspim_ingest/output/618584_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -31,15 +40,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -121,5 +121,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/620629_procedures.json b/scripts/Exaspim_ingest/output/620629_procedures.json index ef95a15d..c73c4020 100644 --- a/scripts/Exaspim_ingest/output/620629_procedures.json +++ b/scripts/Exaspim_ingest/output/620629_procedures.json @@ -76,5 +76,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/620631_procedures.json b/scripts/Exaspim_ingest/output/620631_procedures.json index 322b3aee..58869316 100644 --- a/scripts/Exaspim_ingest/output/620631_procedures.json +++ b/scripts/Exaspim_ingest/output/620631_procedures.json @@ -76,5 +76,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648077_procedures.json b/scripts/Exaspim_ingest/output/648077_procedures.json index 83b66827..967fdec1 100644 --- a/scripts/Exaspim_ingest/output/648077_procedures.json +++ b/scripts/Exaspim_ingest/output/648077_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648079_procedures.json b/scripts/Exaspim_ingest/output/648079_procedures.json index 787cbbc1..af1a66ae 100644 --- a/scripts/Exaspim_ingest/output/648079_procedures.json +++ b/scripts/Exaspim_ingest/output/648079_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -162,5 +169,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648434_procedures.json b/scripts/Exaspim_ingest/output/648434_procedures.json index ed2cf29e..6b3b47aa 100644 --- a/scripts/Exaspim_ingest/output/648434_procedures.json +++ b/scripts/Exaspim_ingest/output/648434_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648435_procedures.json b/scripts/Exaspim_ingest/output/648435_procedures.json index b195de71..2daa97e4 100644 --- a/scripts/Exaspim_ingest/output/648435_procedures.json +++ b/scripts/Exaspim_ingest/output/648435_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648436_procedures.json b/scripts/Exaspim_ingest/output/648436_procedures.json index b30d9b51..e32fc1aa 100644 --- a/scripts/Exaspim_ingest/output/648436_procedures.json +++ b/scripts/Exaspim_ingest/output/648436_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -139,5 +153,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648695_procedures.json b/scripts/Exaspim_ingest/output/648695_procedures.json index 3ec9c07e..76c52685 100644 --- a/scripts/Exaspim_ingest/output/648695_procedures.json +++ b/scripts/Exaspim_ingest/output/648695_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -105,5 +119,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648696_procedures.json b/scripts/Exaspim_ingest/output/648696_procedures.json index 5461b51d..a38c2b3b 100644 --- a/scripts/Exaspim_ingest/output/648696_procedures.json +++ b/scripts/Exaspim_ingest/output/648696_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648697_procedures.json b/scripts/Exaspim_ingest/output/648697_procedures.json index c8eabb0d..6d591b30 100644 --- a/scripts/Exaspim_ingest/output/648697_procedures.json +++ b/scripts/Exaspim_ingest/output/648697_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648698_procedures.json b/scripts/Exaspim_ingest/output/648698_procedures.json index d79880f7..0bc5d060 100644 --- a/scripts/Exaspim_ingest/output/648698_procedures.json +++ b/scripts/Exaspim_ingest/output/648698_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -158,5 +172,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648699_procedures.json b/scripts/Exaspim_ingest/output/648699_procedures.json index 60a76039..6ea8750c 100644 --- a/scripts/Exaspim_ingest/output/648699_procedures.json +++ b/scripts/Exaspim_ingest/output/648699_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -105,5 +119,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648700_procedures.json b/scripts/Exaspim_ingest/output/648700_procedures.json index 412fe696..724c3e87 100644 --- a/scripts/Exaspim_ingest/output/648700_procedures.json +++ b/scripts/Exaspim_ingest/output/648700_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -139,5 +153,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648858_procedures.json b/scripts/Exaspim_ingest/output/648858_procedures.json index 6b975601..38274721 100644 --- a/scripts/Exaspim_ingest/output/648858_procedures.json +++ b/scripts/Exaspim_ingest/output/648858_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -139,5 +153,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648860_procedures.json b/scripts/Exaspim_ingest/output/648860_procedures.json index 3cd91258..098d066d 100644 --- a/scripts/Exaspim_ingest/output/648860_procedures.json +++ b/scripts/Exaspim_ingest/output/648860_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648861_procedures.json b/scripts/Exaspim_ingest/output/648861_procedures.json index d42f531f..3979d452 100644 --- a/scripts/Exaspim_ingest/output/648861_procedures.json +++ b/scripts/Exaspim_ingest/output/648861_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -139,5 +153,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/648862_procedures.json b/scripts/Exaspim_ingest/output/648862_procedures.json index c022bfa6..e55eafd3 100644 --- a/scripts/Exaspim_ingest/output/648862_procedures.json +++ b/scripts/Exaspim_ingest/output/648862_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -139,5 +153,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/650008_procedures.json b/scripts/Exaspim_ingest/output/650008_procedures.json index 54f53208..8ffbf7dd 100644 --- a/scripts/Exaspim_ingest/output/650008_procedures.json +++ b/scripts/Exaspim_ingest/output/650008_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -158,5 +172,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/650009_procedures.json b/scripts/Exaspim_ingest/output/650009_procedures.json index 5a44fd0e..4e383755 100644 --- a/scripts/Exaspim_ingest/output/650009_procedures.json +++ b/scripts/Exaspim_ingest/output/650009_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -158,5 +172,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/650010_procedures.json b/scripts/Exaspim_ingest/output/650010_procedures.json index bdb97b00..3b1c505d 100644 --- a/scripts/Exaspim_ingest/output/650010_procedures.json +++ b/scripts/Exaspim_ingest/output/650010_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/650011_procedures.json b/scripts/Exaspim_ingest/output/650011_procedures.json index 52e47d4c..286a22df 100644 --- a/scripts/Exaspim_ingest/output/650011_procedures.json +++ b/scripts/Exaspim_ingest/output/650011_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/651305_procedures.json b/scripts/Exaspim_ingest/output/651305_procedures.json index ffe0b28f..a3df6c99 100644 --- a/scripts/Exaspim_ingest/output/651305_procedures.json +++ b/scripts/Exaspim_ingest/output/651305_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/651324_procedures.json b/scripts/Exaspim_ingest/output/651324_procedures.json index 7ddf73ef..84912f29 100644 --- a/scripts/Exaspim_ingest/output/651324_procedures.json +++ b/scripts/Exaspim_ingest/output/651324_procedures.json @@ -144,5 +144,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/651327_procedures.json b/scripts/Exaspim_ingest/output/651327_procedures.json index b287d4f6..2112b824 100644 --- a/scripts/Exaspim_ingest/output/651327_procedures.json +++ b/scripts/Exaspim_ingest/output/651327_procedures.json @@ -144,5 +144,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/651895_procedures.json b/scripts/Exaspim_ingest/output/651895_procedures.json index 9d911174..b83876be 100644 --- a/scripts/Exaspim_ingest/output/651895_procedures.json +++ b/scripts/Exaspim_ingest/output/651895_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/651897_procedures.json b/scripts/Exaspim_ingest/output/651897_procedures.json index bb76b361..75bcc23c 100644 --- a/scripts/Exaspim_ingest/output/651897_procedures.json +++ b/scripts/Exaspim_ingest/output/651897_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/652440_procedures.json b/scripts/Exaspim_ingest/output/652440_procedures.json index 42ee018b..c83627f9 100644 --- a/scripts/Exaspim_ingest/output/652440_procedures.json +++ b/scripts/Exaspim_ingest/output/652440_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "652440", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2022-10-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 30000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2022-11-02", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "652440" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -124,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/652441_procedures.json b/scripts/Exaspim_ingest/output/652441_procedures.json index d3f01b60..a5d663dc 100644 --- a/scripts/Exaspim_ingest/output/652441_procedures.json +++ b/scripts/Exaspim_ingest/output/652441_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -176,5 +190,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/652445_procedures.json b/scripts/Exaspim_ingest/output/652445_procedures.json index 13bc86fb..b49e18f0 100644 --- a/scripts/Exaspim_ingest/output/652445_procedures.json +++ b/scripts/Exaspim_ingest/output/652445_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -142,5 +156,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/652779_procedures.json b/scripts/Exaspim_ingest/output/652779_procedures.json index ac3f8e67..b0b2a630 100644 --- a/scripts/Exaspim_ingest/output/652779_procedures.json +++ b/scripts/Exaspim_ingest/output/652779_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -139,5 +153,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/652781_procedures.json b/scripts/Exaspim_ingest/output/652781_procedures.json index 21d60ff4..db0d2ff4 100644 --- a/scripts/Exaspim_ingest/output/652781_procedures.json +++ b/scripts/Exaspim_ingest/output/652781_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -139,5 +153,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/653153_procedures.json b/scripts/Exaspim_ingest/output/653153_procedures.json index e93cc139..aff4c9d2 100644 --- a/scripts/Exaspim_ingest/output/653153_procedures.json +++ b/scripts/Exaspim_ingest/output/653153_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/653158_procedures.json b/scripts/Exaspim_ingest/output/653158_procedures.json index 9fdabee2..cd14c456 100644 --- a/scripts/Exaspim_ingest/output/653158_procedures.json +++ b/scripts/Exaspim_ingest/output/653158_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/653159_procedures.json b/scripts/Exaspim_ingest/output/653159_procedures.json index 10a11b90..76ea0010 100644 --- a/scripts/Exaspim_ingest/output/653159_procedures.json +++ b/scripts/Exaspim_ingest/output/653159_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 300000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300007", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3216g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -192,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/653430_procedures.json b/scripts/Exaspim_ingest/output/653430_procedures.json index da6dd75e..e1052e3a 100644 --- a/scripts/Exaspim_ingest/output/653430_procedures.json +++ b/scripts/Exaspim_ingest/output/653430_procedures.json @@ -178,5 +178,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/653431_procedures.json b/scripts/Exaspim_ingest/output/653431_procedures.json index 788195dc..160353e3 100644 --- a/scripts/Exaspim_ingest/output/653431_procedures.json +++ b/scripts/Exaspim_ingest/output/653431_procedures.json @@ -178,5 +178,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/653432_procedures.json b/scripts/Exaspim_ingest/output/653432_procedures.json index 6f66963f..98ed6028 100644 --- a/scripts/Exaspim_ingest/output/653432_procedures.json +++ b/scripts/Exaspim_ingest/output/653432_procedures.json @@ -196,5 +196,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/653980_procedures.json b/scripts/Exaspim_ingest/output/653980_procedures.json index 723b9fcb..a8426959 100644 --- a/scripts/Exaspim_ingest/output/653980_procedures.json +++ b/scripts/Exaspim_ingest/output/653980_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/653981_procedures.json b/scripts/Exaspim_ingest/output/653981_procedures.json index 876b1a0e..dd2c5b8d 100644 --- a/scripts/Exaspim_ingest/output/653981_procedures.json +++ b/scripts/Exaspim_ingest/output/653981_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 30000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/654306_procedures.json b/scripts/Exaspim_ingest/output/654306_procedures.json index 83317570..fedd190d 100644 --- a/scripts/Exaspim_ingest/output/654306_procedures.json +++ b/scripts/Exaspim_ingest/output/654306_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -199,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/654308_procedures.json b/scripts/Exaspim_ingest/output/654308_procedures.json index 4a2b1e36..ac2593e4 100644 --- a/scripts/Exaspim_ingest/output/654308_procedures.json +++ b/scripts/Exaspim_ingest/output/654308_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -199,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/654727_procedures.json b/scripts/Exaspim_ingest/output/654727_procedures.json index f0840934..79ebad32 100644 --- a/scripts/Exaspim_ingest/output/654727_procedures.json +++ b/scripts/Exaspim_ingest/output/654727_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -25,21 +41,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300023", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3215g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1800000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -139,5 +153,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/655145_procedures.json b/scripts/Exaspim_ingest/output/655145_procedures.json index 6838c04f..29193e53 100644 --- a/scripts/Exaspim_ingest/output/655145_procedures.json +++ b/scripts/Exaspim_ingest/output/655145_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "655145", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2022-11-22", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300021", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3213g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-01-11", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "655145" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/655146_procedures.json b/scripts/Exaspim_ingest/output/655146_procedures.json index 7a01f2d0..90334dde 100644 --- a/scripts/Exaspim_ingest/output/655146_procedures.json +++ b/scripts/Exaspim_ingest/output/655146_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "655146", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2022-11-22", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300021", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3213g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-01-11", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "655146" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -127,5 +209,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/655147_procedures.json b/scripts/Exaspim_ingest/output/655147_procedures.json index 37e730dd..946c74bf 100644 --- a/scripts/Exaspim_ingest/output/655147_procedures.json +++ b/scripts/Exaspim_ingest/output/655147_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "655147", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2022-11-22", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300021", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3213g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-01-11", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "655147" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/657676_procedures.json b/scripts/Exaspim_ingest/output/657676_procedures.json index 5d4ba712..f2fd448e 100644 --- a/scripts/Exaspim_ingest/output/657676_procedures.json +++ b/scripts/Exaspim_ingest/output/657676_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/658734_procedures.json b/scripts/Exaspim_ingest/output/658734_procedures.json index 3c77aea9..ccc8f946 100644 --- a/scripts/Exaspim_ingest/output/658734_procedures.json +++ b/scripts/Exaspim_ingest/output/658734_procedures.json @@ -144,5 +144,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/658735_procedures.json b/scripts/Exaspim_ingest/output/658735_procedures.json index 80252183..2deb9bff 100644 --- a/scripts/Exaspim_ingest/output/658735_procedures.json +++ b/scripts/Exaspim_ingest/output/658735_procedures.json @@ -144,5 +144,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/659142_procedures.json b/scripts/Exaspim_ingest/output/659142_procedures.json index 881ff581..1ebca36d 100644 --- a/scripts/Exaspim_ingest/output/659142_procedures.json +++ b/scripts/Exaspim_ingest/output/659142_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "659142", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2022-12-22", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 60000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300021", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3213g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-02-13", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "659142" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +214,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/659145_procedures.json b/scripts/Exaspim_ingest/output/659145_procedures.json index 48bb239f..7eb5e0d5 100644 --- a/scripts/Exaspim_ingest/output/659145_procedures.json +++ b/scripts/Exaspim_ingest/output/659145_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "659145", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2022-12-22", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 60000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300021", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3213g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-02-13", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "659145" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/659146_procedures.json b/scripts/Exaspim_ingest/output/659146_procedures.json index af9ae6ea..bddda3e7 100644 --- a/scripts/Exaspim_ingest/output/659146_procedures.json +++ b/scripts/Exaspim_ingest/output/659146_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 60000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/660625_procedures.json b/scripts/Exaspim_ingest/output/660625_procedures.json index f7d2d056..195d08ed 100644 --- a/scripts/Exaspim_ingest/output/660625_procedures.json +++ b/scripts/Exaspim_ingest/output/660625_procedures.json @@ -128,5 +128,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/660627_procedures.json b/scripts/Exaspim_ingest/output/660627_procedures.json index 8e1af09b..53dc917d 100644 --- a/scripts/Exaspim_ingest/output/660627_procedures.json +++ b/scripts/Exaspim_ingest/output/660627_procedures.json @@ -94,5 +94,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/660629_procedures.json b/scripts/Exaspim_ingest/output/660629_procedures.json index eec5adae..805cbeb0 100644 --- a/scripts/Exaspim_ingest/output/660629_procedures.json +++ b/scripts/Exaspim_ingest/output/660629_procedures.json @@ -144,5 +144,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/660630_procedures.json b/scripts/Exaspim_ingest/output/660630_procedures.json index 204acf94..333a8bd3 100644 --- a/scripts/Exaspim_ingest/output/660630_procedures.json +++ b/scripts/Exaspim_ingest/output/660630_procedures.json @@ -144,5 +144,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/660949_procedures.json b/scripts/Exaspim_ingest/output/660949_procedures.json index 34f3be91..dcb4907c 100644 --- a/scripts/Exaspim_ingest/output/660949_procedures.json +++ b/scripts/Exaspim_ingest/output/660949_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/660950_procedures.json b/scripts/Exaspim_ingest/output/660950_procedures.json index cfa66ba0..626708cd 100644 --- a/scripts/Exaspim_ingest/output/660950_procedures.json +++ b/scripts/Exaspim_ingest/output/660950_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/661293_procedures.json b/scripts/Exaspim_ingest/output/661293_procedures.json index ae821c86..64ce9114 100644 --- a/scripts/Exaspim_ingest/output/661293_procedures.json +++ b/scripts/Exaspim_ingest/output/661293_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "661293", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-01-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300021", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3213g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-02-17", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "661293" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/661300_procedures.json b/scripts/Exaspim_ingest/output/661300_procedures.json index 2a69a1e3..d4a19ca3 100644 --- a/scripts/Exaspim_ingest/output/661300_procedures.json +++ b/scripts/Exaspim_ingest/output/661300_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -196,5 +203,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/663410_procedures.json b/scripts/Exaspim_ingest/output/663410_procedures.json index 3a9564f0..d5768580 100644 --- a/scripts/Exaspim_ingest/output/663410_procedures.json +++ b/scripts/Exaspim_ingest/output/663410_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "663410", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-02-03", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300005", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4360g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-03-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "663410" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -124,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/663412_procedures.json b/scripts/Exaspim_ingest/output/663412_procedures.json index 1d5d8ba2..49541c4b 100644 --- a/scripts/Exaspim_ingest/output/663412_procedures.json +++ b/scripts/Exaspim_ingest/output/663412_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "663412", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-02-03", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300005", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4360g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-03-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "663412" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +214,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/664761_procedures.json b/scripts/Exaspim_ingest/output/664761_procedures.json index 31b3b26d..b416cf91 100644 --- a/scripts/Exaspim_ingest/output/664761_procedures.json +++ b/scripts/Exaspim_ingest/output/664761_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -180,5 +187,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/664762_procedures.json b/scripts/Exaspim_ingest/output/664762_procedures.json index 6e5ad11a..ee1d742e 100644 --- a/scripts/Exaspim_ingest/output/664762_procedures.json +++ b/scripts/Exaspim_ingest/output/664762_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "664762", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-02-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300021", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3213g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-03-20", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "664762" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/665081_procedures.json b/scripts/Exaspim_ingest/output/665081_procedures.json index ef765b37..cab99664 100644 --- a/scripts/Exaspim_ingest/output/665081_procedures.json +++ b/scripts/Exaspim_ingest/output/665081_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 60000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -183,5 +190,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/665082_procedures.json b/scripts/Exaspim_ingest/output/665082_procedures.json index 3d808550..16009a21 100644 --- a/scripts/Exaspim_ingest/output/665082_procedures.json +++ b/scripts/Exaspim_ingest/output/665082_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 60000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -149,5 +156,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/665083_procedures.json b/scripts/Exaspim_ingest/output/665083_procedures.json index 2f8db3ef..5703fa8f 100644 --- a/scripts/Exaspim_ingest/output/665083_procedures.json +++ b/scripts/Exaspim_ingest/output/665083_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "665083", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-02-14", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 60000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300005", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4360g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-03-21", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "665083" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -124,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/665465_procedures.json b/scripts/Exaspim_ingest/output/665465_procedures.json index ba7c3682..6512294a 100644 --- a/scripts/Exaspim_ingest/output/665465_procedures.json +++ b/scripts/Exaspim_ingest/output/665465_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -149,5 +156,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/665470_procedures.json b/scripts/Exaspim_ingest/output/665470_procedures.json index 605dac0c..cb604f2b 100644 --- a/scripts/Exaspim_ingest/output/665470_procedures.json +++ b/scripts/Exaspim_ingest/output/665470_procedures.json @@ -35,11 +35,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 6000000000, "titer_unit": "gc/mL" @@ -60,15 +76,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -180,5 +187,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/667352_procedures.json b/scripts/Exaspim_ingest/output/667352_procedures.json index fa6a3a77..ca2c781b 100644 --- a/scripts/Exaspim_ingest/output/667352_procedures.json +++ b/scripts/Exaspim_ingest/output/667352_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "667352", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-03", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300001", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4299g", + "prep_date": "2022-09-15", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-04-07", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "667352" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/667354_procedures.json b/scripts/Exaspim_ingest/output/667354_procedures.json index cf650ff0..e4778da4 100644 --- a/scripts/Exaspim_ingest/output/667354_procedures.json +++ b/scripts/Exaspim_ingest/output/667354_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "667354", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-03", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300001", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4299g", + "prep_date": "2022-09-15", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-04-07", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "667354" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/667857_procedures.json b/scripts/Exaspim_ingest/output/667857_procedures.json index b798b554..d46f9468 100644 --- a/scripts/Exaspim_ingest/output/667857_procedures.json +++ b/scripts/Exaspim_ingest/output/667857_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 60000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -218,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/667996_procedures.json b/scripts/Exaspim_ingest/output/667996_procedures.json index 26025a97..4b627470 100644 --- a/scripts/Exaspim_ingest/output/667996_procedures.json +++ b/scripts/Exaspim_ingest/output/667996_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "667996", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-04-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "667996" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +218,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/667997_procedures.json b/scripts/Exaspim_ingest/output/667997_procedures.json index 9af4639c..e65ea9c8 100644 --- a/scripts/Exaspim_ingest/output/667997_procedures.json +++ b/scripts/Exaspim_ingest/output/667997_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "667997", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-04-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "667997" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +218,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/667998_procedures.json b/scripts/Exaspim_ingest/output/667998_procedures.json index e551614c..636e7eca 100644 --- a/scripts/Exaspim_ingest/output/667998_procedures.json +++ b/scripts/Exaspim_ingest/output/667998_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "667998", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-04-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "667998" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -127,5 +202,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/668294_procedures.json b/scripts/Exaspim_ingest/output/668294_procedures.json index b6ccfef2..d61cee56 100644 --- a/scripts/Exaspim_ingest/output/668294_procedures.json +++ b/scripts/Exaspim_ingest/output/668294_procedures.json @@ -166,5 +166,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/669973_procedures.json b/scripts/Exaspim_ingest/output/669973_procedures.json index 4cddc168..3eff607d 100644 --- a/scripts/Exaspim_ingest/output/669973_procedures.json +++ b/scripts/Exaspim_ingest/output/669973_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -218,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/669977_procedures.json b/scripts/Exaspim_ingest/output/669977_procedures.json index 29679d59..2282e611 100644 --- a/scripts/Exaspim_ingest/output/669977_procedures.json +++ b/scripts/Exaspim_ingest/output/669977_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 1000000000, "titer_unit": "gc/mL" @@ -38,15 +54,6 @@ "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -218,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/670339_procedures.json b/scripts/Exaspim_ingest/output/670339_procedures.json index 7e8df585..59adc167 100644 --- a/scripts/Exaspim_ingest/output/670339_procedures.json +++ b/scripts/Exaspim_ingest/output/670339_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "670339", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-07-19", + "experimenter_full_name": "21228", + "iacuc_protocol": "2205", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "670339" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-04-14", + "experimenter_full_name": "NSB-278", + "iacuc_protocol": "2205", + "animal_weight_prior": "21.5", + "animal_weight_post": "21.3", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "78.0", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 2", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "15.0", + "recovery_time_unit": "minute", + "injection_duration": "10", + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "1.7", + "injection_coordinate_ap": "-0.34", + "injection_coordinate_depth": [ + "3.58" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "15.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.7", + "injection_coordinate_ap": "-0.34", + "injection_coordinate_depth": [ + "3.58" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/670344_procedures.json b/scripts/Exaspim_ingest/output/670344_procedures.json index 8131ce66..efc98983 100644 --- a/scripts/Exaspim_ingest/output/670344_procedures.json +++ b/scripts/Exaspim_ingest/output/670344_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "670344", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-07-19", + "experimenter_full_name": "21228", + "iacuc_protocol": "2205", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "670344" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-04-14", + "experimenter_full_name": "NSB-278", + "iacuc_protocol": "2205", + "animal_weight_prior": "17.5", + "animal_weight_post": "17.7", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60.0", + "duration_unit": "minute", + "level": "1.25" + }, + "workstation_id": "SWS 5", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "7.0", + "recovery_time_unit": "minute", + "injection_duration": "10", + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "1.7", + "injection_coordinate_ap": "-0.34", + "injection_coordinate_depth": [ + "3.58" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "7.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.7", + "injection_coordinate_ap": "-0.34", + "injection_coordinate_depth": [ + "3.58" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": null, + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/670471_procedures.json b/scripts/Exaspim_ingest/output/670471_procedures.json index e23759c8..33835b62 100644 --- a/scripts/Exaspim_ingest/output/670471_procedures.json +++ b/scripts/Exaspim_ingest/output/670471_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "670471", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-07-19", + "experimenter_full_name": "21228", + "iacuc_protocol": "2205", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "670471" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-04-07", + "experimenter_full_name": "NSB-278", + "iacuc_protocol": "2205", + "animal_weight_prior": "18.0", + "animal_weight_post": "18.2", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60.0", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 5", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "8.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "1.7", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.0" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "8.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.7", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.0" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": null, + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/670808_procedures.json b/scripts/Exaspim_ingest/output/670808_procedures.json index db0edf1c..c1cece91 100644 --- a/scripts/Exaspim_ingest/output/670808_procedures.json +++ b/scripts/Exaspim_ingest/output/670808_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "670808", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-29", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "Ef1a-fDOI-eGFP PHP.eB", + "tars_identifiers": null, + "addgene_id": null, + "titer": 5000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "CAG-FLEX-tdTom PHP.eB", + "tars_identifiers": { + "virus_tars_id": "AiV300162", + "plasmid_tars_alias": null, + "prep_lot_number": "v162851", + "prep_date": "2023-02-01", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 5000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-01", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "670808" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -188,5 +263,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/670809_procedures.json b/scripts/Exaspim_ingest/output/670809_procedures.json index 921714b5..5e20a95f 100644 --- a/scripts/Exaspim_ingest/output/670809_procedures.json +++ b/scripts/Exaspim_ingest/output/670809_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "670809", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-29", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "Ef1a-fDOI-eGFP PHP.eB", + "tars_identifiers": null, + "addgene_id": null, + "titer": 5000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "CAG-FLEX-tdTom PHP.eB", + "tars_identifiers": { + "virus_tars_id": "AiV300162", + "plasmid_tars_alias": null, + "prep_lot_number": "v162851", + "prep_date": "2023-02-01", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 5000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-01", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "670809" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -188,5 +263,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/670944_procedures.json b/scripts/Exaspim_ingest/output/670944_procedures.json index 698dea4f..560bad36 100644 --- a/scripts/Exaspim_ingest/output/670944_procedures.json +++ b/scripts/Exaspim_ingest/output/670944_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "670944", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-29", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-02", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "670944" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +218,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/671477_procedures.json b/scripts/Exaspim_ingest/output/671477_procedures.json index 6ab397fb..38c0f75b 100644 --- a/scripts/Exaspim_ingest/output/671477_procedures.json +++ b/scripts/Exaspim_ingest/output/671477_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "671477", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-31", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "Ef1a-fDOI-eGFP PHP.eB", + "tars_identifiers": null, + "addgene_id": null, + "titer": 5000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "CAG-FLEX-tdTom PHP.eB", + "tars_identifiers": { + "virus_tars_id": "AiV300162", + "plasmid_tars_alias": null, + "prep_lot_number": "v162851", + "prep_date": "2023-02-01", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 200000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-05", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "671477" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -188,5 +263,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/673157_procedures.json b/scripts/Exaspim_ingest/output/673157_procedures.json index 5c9e1eaa..64d26f74 100644 --- a/scripts/Exaspim_ingest/output/673157_procedures.json +++ b/scripts/Exaspim_ingest/output/673157_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "673157", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-04-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300002", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4359g", + "prep_date": "2022-09-21", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-17", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "673157" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/673161_procedures.json b/scripts/Exaspim_ingest/output/673161_procedures.json index 2bccd74e..1a11305e 100644 --- a/scripts/Exaspim_ingest/output/673161_procedures.json +++ b/scripts/Exaspim_ingest/output/673161_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "673161", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-04-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 500000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300002", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4359g", + "prep_date": "2022-09-21", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-17", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "673161" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/673163_procedures.json b/scripts/Exaspim_ingest/output/673163_procedures.json index 28bbc647..c6e7dee2 100644 --- a/scripts/Exaspim_ingest/output/673163_procedures.json +++ b/scripts/Exaspim_ingest/output/673163_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "673163", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-04-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 500000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300002", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4359g", + "prep_date": "2022-09-21", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-17", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "673163" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/673996_procedures.json b/scripts/Exaspim_ingest/output/673996_procedures.json index 56bf3faa..eaffabef 100644 --- a/scripts/Exaspim_ingest/output/673996_procedures.json +++ b/scripts/Exaspim_ingest/output/673996_procedures.json @@ -1,6 +1,29 @@ { "subject_id": "673996", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-05-23", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "673996" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +166,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/673998_procedures.json b/scripts/Exaspim_ingest/output/673998_procedures.json index b1280584..ffa2b741 100644 --- a/scripts/Exaspim_ingest/output/673998_procedures.json +++ b/scripts/Exaspim_ingest/output/673998_procedures.json @@ -1,6 +1,29 @@ { "subject_id": "673998", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-05-23", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "673998" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +166,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/674184_procedures.json b/scripts/Exaspim_ingest/output/674184_procedures.json index 312a9d25..3bb6e09e 100644 --- a/scripts/Exaspim_ingest/output/674184_procedures.json +++ b/scripts/Exaspim_ingest/output/674184_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AiP1837 - MGT_E252", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV1837_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5316C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, "addgene_id": null, "titer": 444000000000000, "titer_unit": "gc/mL" @@ -25,7 +41,14 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 10000000000, "titer_unit": "gc/mL" @@ -33,21 +56,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -200,5 +221,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/674185_procedures.json b/scripts/Exaspim_ingest/output/674185_procedures.json index 50a97f79..c1d197ef 100644 --- a/scripts/Exaspim_ingest/output/674185_procedures.json +++ b/scripts/Exaspim_ingest/output/674185_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,7 +41,14 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 10000000000, "titer_unit": "gc/mL" @@ -40,21 +56,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -207,5 +221,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/674190_procedures.json b/scripts/Exaspim_ingest/output/674190_procedures.json index efbdd358..a53ccefe 100644 --- a/scripts/Exaspim_ingest/output/674190_procedures.json +++ b/scripts/Exaspim_ingest/output/674190_procedures.json @@ -13,11 +13,27 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", "name": "AiP1837 - MGT_E252", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV1837_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5316C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, "addgene_id": null, "titer": 444000000000000, "titer_unit": "gc/mL" @@ -25,7 +41,14 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 10000000000, "titer_unit": "gc/mL" @@ -33,21 +56,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -200,5 +221,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/674191_procedures.json b/scripts/Exaspim_ingest/output/674191_procedures.json index 6fda1616..bcf504ad 100644 --- a/scripts/Exaspim_ingest/output/674191_procedures.json +++ b/scripts/Exaspim_ingest/output/674191_procedures.json @@ -13,6 +13,15 @@ "workstation_id": null, "procedures": [ { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, "injection_materials": [ { "material_type": "Virus", @@ -32,7 +41,14 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 10000000000, "titer_unit": "gc/mL" @@ -40,21 +56,19 @@ { "material_type": "Virus", "name": "AAV-PHP-eB_7x-TRE-tDTomato", - "tars_identifiers": null, + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, "addgene_id": null, "titer": 18000000000000, "titer_unit": "gc/mL" } ], - "recovery_time": null, - "recovery_time_unit": "minute", - "injection_duration": null, - "injection_duration_unit": "minute", - "instrument_id": null, - "procedure_type": "Retro-orbital injection", - "injection_volume": null, - "injection_volume_unit": "microliter", - "injection_eye": null, "protocol_id": "unknown" } ], @@ -207,5 +221,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/674741_procedures.json b/scripts/Exaspim_ingest/output/674741_procedures.json index a9d523e6..913ae739 100644 --- a/scripts/Exaspim_ingest/output/674741_procedures.json +++ b/scripts/Exaspim_ingest/output/674741_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "674741", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-04-28", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300006", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4300g", + "prep_date": "2022-09-15", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-06-02", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "674741" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -124,5 +206,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/674743_procedures.json b/scripts/Exaspim_ingest/output/674743_procedures.json index cb48db4c..685d5571 100644 --- a/scripts/Exaspim_ingest/output/674743_procedures.json +++ b/scripts/Exaspim_ingest/output/674743_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "674743", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-04-28", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300006", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4300g", + "prep_date": "2022-09-15", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-06-02", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "674743" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +214,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/675057_procedures.json b/scripts/Exaspim_ingest/output/675057_procedures.json index 22f615f2..4034bc3e 100644 --- a/scripts/Exaspim_ingest/output/675057_procedures.json +++ b/scripts/Exaspim_ingest/output/675057_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "675057", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-04-25", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 60000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300006", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4300g", + "prep_date": "2022-09-15", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-30", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "675057" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +214,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/675058_procedures.json b/scripts/Exaspim_ingest/output/675058_procedures.json index 5c9a10de..9db840cd 100644 --- a/scripts/Exaspim_ingest/output/675058_procedures.json +++ b/scripts/Exaspim_ingest/output/675058_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "675058", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-04-25", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 60000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300006", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4300g", + "prep_date": "2022-09-15", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-30", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "675058" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -37,5 +119,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/675061_procedures.json b/scripts/Exaspim_ingest/output/675061_procedures.json index b3bf1ff5..bad6f144 100644 --- a/scripts/Exaspim_ingest/output/675061_procedures.json +++ b/scripts/Exaspim_ingest/output/675061_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "675061", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-04-25", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300006", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4300g", + "prep_date": "2022-09-15", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-30", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "675061" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -116,5 +198,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/675374_procedures.json b/scripts/Exaspim_ingest/output/675374_procedures.json index f7d43371..10ec1b6d 100644 --- a/scripts/Exaspim_ingest/output/675374_procedures.json +++ b/scripts/Exaspim_ingest/output/675374_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "675374", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-31", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AiP1837 - MGT_E252", + "tars_identifiers": { + "virus_tars_id": "AiV1837_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5316C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 444000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-05", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "675374" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +229,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/675375_procedures.json b/scripts/Exaspim_ingest/output/675375_procedures.json index bc53d470..52fcf364 100644 --- a/scripts/Exaspim_ingest/output/675375_procedures.json +++ b/scripts/Exaspim_ingest/output/675375_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "675375", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-03-31", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AiP1791 - MGT_E255", + "tars_identifiers": { + "virus_tars_id": "AiV1791_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5311C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 487000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-05", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "675375" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +229,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/676007_procedures.json b/scripts/Exaspim_ingest/output/676007_procedures.json index 700050c1..505d3c44 100644 --- a/scripts/Exaspim_ingest/output/676007_procedures.json +++ b/scripts/Exaspim_ingest/output/676007_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "676007", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-07-19", + "experimenter_full_name": "21228", + "iacuc_protocol": "2205", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "676007" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-26", + "experimenter_full_name": "NSB-278", + "iacuc_protocol": "2205", + "animal_weight_prior": "24.2", + "animal_weight_post": "24.2", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "66.0", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 2", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "15.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "1.75", + "injection_coordinate_ap": "-1.34", + "injection_coordinate_depth": [ + "4.5" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "15.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.75", + "injection_coordinate_ap": "-1.34", + "injection_coordinate_depth": [ + "4.5" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/676009_procedures.json b/scripts/Exaspim_ingest/output/676009_procedures.json index 9747e12f..56ba9e48 100644 --- a/scripts/Exaspim_ingest/output/676009_procedures.json +++ b/scripts/Exaspim_ingest/output/676009_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "676009", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-07-19", + "experimenter_full_name": "21228", + "iacuc_protocol": "2205", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "676009" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-05-22", + "experimenter_full_name": "NSB-278", + "iacuc_protocol": "2205", + "animal_weight_prior": "23.4", + "animal_weight_post": "23.4", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60.0", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 4", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "1.75", + "injection_coordinate_ap": "-1.34", + "injection_coordinate_depth": [ + "4.5" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.75", + "injection_coordinate_ap": "-1.34", + "injection_coordinate_depth": [ + "4.5" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/678112_procedures.json b/scripts/Exaspim_ingest/output/678112_procedures.json index a497dcce..d7223cbf 100644 --- a/scripts/Exaspim_ingest/output/678112_procedures.json +++ b/scripts/Exaspim_ingest/output/678112_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "678112", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-05-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300002", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4359g", + "prep_date": "2022-09-21", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-06-16", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "678112" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/678116_procedures.json b/scripts/Exaspim_ingest/output/678116_procedures.json index 360eddd6..eec5b4d9 100644 --- a/scripts/Exaspim_ingest/output/678116_procedures.json +++ b/scripts/Exaspim_ingest/output/678116_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "678116", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-05-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300002", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4359g", + "prep_date": "2022-09-21", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-06-16", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "678116" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/678794_procedures.json b/scripts/Exaspim_ingest/output/678794_procedures.json index 30e3bce7..b6ecdbf6 100644 --- a/scripts/Exaspim_ingest/output/678794_procedures.json +++ b/scripts/Exaspim_ingest/output/678794_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "678794", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-05-17", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300006", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4300g", + "prep_date": "2022-09-15", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-06-21", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "678794" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +214,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/681465_procedures.json b/scripts/Exaspim_ingest/output/681465_procedures.json index c1f49d73..a430920e 100644 --- a/scripts/Exaspim_ingest/output/681465_procedures.json +++ b/scripts/Exaspim_ingest/output/681465_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "681465", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-07-19", + "experimenter_full_name": "21228", + "iacuc_protocol": "2205", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "681465" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-06-02", + "experimenter_full_name": "NSB-278", + "iacuc_protocol": "2205", + "animal_weight_prior": "19.1", + "animal_weight_post": "19.3", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "45.00", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 5", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "8.0", + "recovery_time_unit": "minute", + "injection_duration": "10", + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "1.7", + "injection_coordinate_ap": "-0.34", + "injection_coordinate_depth": [ + "3.58" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "8.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.7", + "injection_coordinate_ap": "-0.34", + "injection_coordinate_depth": [ + "3.58" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/681469_procedures.json b/scripts/Exaspim_ingest/output/681469_procedures.json index 9e7d56a6..035d56b7 100644 --- a/scripts/Exaspim_ingest/output/681469_procedures.json +++ b/scripts/Exaspim_ingest/output/681469_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "681469", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-07-19", + "experimenter_full_name": "21228", + "iacuc_protocol": "2205", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "681469" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-06-02", + "experimenter_full_name": "NSB-278", + "iacuc_protocol": "2205", + "animal_weight_prior": "17.3", + "animal_weight_post": "17.3", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60.0", + "duration_unit": "minute", + "level": "1.75" + }, + "workstation_id": "SWS 2", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": "10", + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "1.7", + "injection_coordinate_ap": "-0.34", + "injection_coordinate_depth": [ + "3.58" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.7", + "injection_coordinate_ap": "-0.34", + "injection_coordinate_depth": [ + "3.58" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "50.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/683790_procedures.json b/scripts/Exaspim_ingest/output/683790_procedures.json index 7a849286..5aeaab5c 100644 --- a/scripts/Exaspim_ingest/output/683790_procedures.json +++ b/scripts/Exaspim_ingest/output/683790_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "683790", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-06-16", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300003", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5046g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-07-21", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "683790" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -21,5 +103,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/683791_procedures.json b/scripts/Exaspim_ingest/output/683791_procedures.json index 8140b77b..6d47b69b 100644 --- a/scripts/Exaspim_ingest/output/683791_procedures.json +++ b/scripts/Exaspim_ingest/output/683791_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "683791", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-06-16", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300003", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5046g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-07-21", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "683791" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -21,5 +103,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/684100_procedures.json b/scripts/Exaspim_ingest/output/684100_procedures.json index 5e206232..72eab83d 100644 --- a/scripts/Exaspim_ingest/output/684100_procedures.json +++ b/scripts/Exaspim_ingest/output/684100_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "684100", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-06-20", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300003", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5046g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-08-02", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "684100" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/684101_procedures.json b/scripts/Exaspim_ingest/output/684101_procedures.json index 92a8fd2c..34266e0e 100644 --- a/scripts/Exaspim_ingest/output/684101_procedures.json +++ b/scripts/Exaspim_ingest/output/684101_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "684101", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-06-20", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300003", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5046g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-08-02", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "684101" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/685221_procedures.json b/scripts/Exaspim_ingest/output/685221_procedures.json index 5b06e144..b59d53f4 100644 --- a/scripts/Exaspim_ingest/output/685221_procedures.json +++ b/scripts/Exaspim_ingest/output/685221_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "685221", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-06-23", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-tdTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-08-08", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "685221" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +214,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/685222_procedures.json b/scripts/Exaspim_ingest/output/685222_procedures.json index 43d6ecdb..17ea8503 100644 --- a/scripts/Exaspim_ingest/output/685222_procedures.json +++ b/scripts/Exaspim_ingest/output/685222_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "685222", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-06-23", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 6000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-tdTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-08-08", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "685222" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +214,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/686951_procedures.json b/scripts/Exaspim_ingest/output/686951_procedures.json index 8cf8bc33..875463d7 100644 --- a/scripts/Exaspim_ingest/output/686951_procedures.json +++ b/scripts/Exaspim_ingest/output/686951_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "686951", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-07-05", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-08-09", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "686951" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +214,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/686955_procedures.json b/scripts/Exaspim_ingest/output/686955_procedures.json index 33d947cb..bdb02159 100644 --- a/scripts/Exaspim_ingest/output/686955_procedures.json +++ b/scripts/Exaspim_ingest/output/686955_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "686955", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-07-05", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": { + "virus_tars_id": "AiV300008", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5048g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-08-09", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "686955" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +214,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/697836_procedures.json b/scripts/Exaspim_ingest/output/697836_procedures.json index b0e18855..51025db7 100644 --- a/scripts/Exaspim_ingest/output/697836_procedures.json +++ b/scripts/Exaspim_ingest/output/697836_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "697836", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-09-14", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300004", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5047g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-10-18", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "697836" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/697837_procedures.json b/scripts/Exaspim_ingest/output/697837_procedures.json index 058e027e..7aaceea7 100644 --- a/scripts/Exaspim_ingest/output/697837_procedures.json +++ b/scripts/Exaspim_ingest/output/697837_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "697837", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-09-14", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300004", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5047g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-10-18", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "697837" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/701772_procedures.json b/scripts/Exaspim_ingest/output/701772_procedures.json index 6d2085c0..41bbaa86 100644 --- a/scripts/Exaspim_ingest/output/701772_procedures.json +++ b/scripts/Exaspim_ingest/output/701772_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "701772", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-11-13", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "701772" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/701773_procedures.json b/scripts/Exaspim_ingest/output/701773_procedures.json index 2d4077d0..fb5861f0 100644 --- a/scripts/Exaspim_ingest/output/701773_procedures.json +++ b/scripts/Exaspim_ingest/output/701773_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "701773", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-11-13", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "701773" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/703066_procedures.json b/scripts/Exaspim_ingest/output/703066_procedures.json index 04393eab..15d10443 100644 --- a/scripts/Exaspim_ingest/output/703066_procedures.json +++ b/scripts/Exaspim_ingest/output/703066_procedures.json @@ -1,6 +1,123 @@ { "subject_id": "703066", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-11", + "experimenter_full_name": "30424", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "703066" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-09-18", + "experimenter_full_name": "NSB-5356", + "iacuc_protocol": "2109", + "animal_weight_prior": "21.1", + "animal_weight_post": "21.2", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60.0", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 3", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "4.482", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.5", + "injection_coordinate_ap": "2.5", + "injection_coordinate_depth": [ + "-0.7" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "40.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": null, + "experimenter_full_name": "NSB-5356", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": null, + "duration_unit": "minute", + "level": null + }, + "workstation_id": null, + "procedures": [ + { + "injection_materials": [], + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.6", + "injection_coordinate_ap": "-5.6", + "injection_coordinate_depth": [ + "-4.5" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "300.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -127,5 +244,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/703067_procedures.json b/scripts/Exaspim_ingest/output/703067_procedures.json index 2f8d8e14..9df7b69b 100644 --- a/scripts/Exaspim_ingest/output/703067_procedures.json +++ b/scripts/Exaspim_ingest/output/703067_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "703067", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-11", + "experimenter_full_name": "30424", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "703067" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-09-29", + "experimenter_full_name": "NSB-5356", + "iacuc_protocol": "2109", + "animal_weight_prior": "22.4", + "animal_weight_post": "22.4", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60.0", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 4", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.5", + "injection_coordinate_ap": "2.5", + "injection_coordinate_depth": [ + "-0.7" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "40.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.6", + "injection_coordinate_ap": "-5.6", + "injection_coordinate_depth": [ + "-4.5" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "300.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/703070_procedures.json b/scripts/Exaspim_ingest/output/703070_procedures.json index 6ebf37a8..26895db2 100644 --- a/scripts/Exaspim_ingest/output/703070_procedures.json +++ b/scripts/Exaspim_ingest/output/703070_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "703070", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-11", + "experimenter_full_name": "30424", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "703070" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-09-19", + "experimenter_full_name": "NSB-5356", + "iacuc_protocol": "2109", + "animal_weight_prior": "15.9", + "animal_weight_post": "15.9", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "78.0", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 4", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.5", + "injection_coordinate_ap": "2.5", + "injection_coordinate_depth": [ + "-0.7" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "40.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.6", + "injection_coordinate_ap": "-5.6", + "injection_coordinate_depth": [ + "-4.5" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "300.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/703071_procedures.json b/scripts/Exaspim_ingest/output/703071_procedures.json index 9ed7673b..29e118cf 100644 --- a/scripts/Exaspim_ingest/output/703071_procedures.json +++ b/scripts/Exaspim_ingest/output/703071_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "703071", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-11", + "experimenter_full_name": "30424", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "703071" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-09-19", + "experimenter_full_name": "NSB-5356", + "iacuc_protocol": "2109", + "animal_weight_prior": "17.5", + "animal_weight_post": "17.3", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "120.0", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 3", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-1.5", + "injection_coordinate_ap": "2.5", + "injection_coordinate_depth": [ + "-0.7" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "40.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.6", + "injection_coordinate_ap": "-5.6", + "injection_coordinate_depth": [ + "-4.5" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "300.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -127,5 +224,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/704521_procedures.json b/scripts/Exaspim_ingest/output/704521_procedures.json index c367eaf5..c6430b13 100644 --- a/scripts/Exaspim_ingest/output/704521_procedures.json +++ b/scripts/Exaspim_ingest/output/704521_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "704521", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-06", + "experimenter_full_name": "31079", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-07", + "experimenter_full_name": "31079", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "704521" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -127,5 +209,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/704522_procedures.json b/scripts/Exaspim_ingest/output/704522_procedures.json index cfd87c91..64e43f77 100644 --- a/scripts/Exaspim_ingest/output/704522_procedures.json +++ b/scripts/Exaspim_ingest/output/704522_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "704522", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-06", + "experimenter_full_name": "31079", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-07", + "experimenter_full_name": "31079", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "704522" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/704523_procedures.json b/scripts/Exaspim_ingest/output/704523_procedures.json index 4128fcce..d2c7c727 100644 --- a/scripts/Exaspim_ingest/output/704523_procedures.json +++ b/scripts/Exaspim_ingest/output/704523_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "704523", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-06", + "experimenter_full_name": "31079", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-07", + "experimenter_full_name": "31079", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "704523" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/705161_procedures.json b/scripts/Exaspim_ingest/output/705161_procedures.json index 9f0a8612..dd3c522c 100644 --- a/scripts/Exaspim_ingest/output/705161_procedures.json +++ b/scripts/Exaspim_ingest/output/705161_procedures.json @@ -1,6 +1,73 @@ { "subject_id": "705161", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-02", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 100000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-07", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "705161" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -53,5 +120,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/706300_procedures.json b/scripts/Exaspim_ingest/output/706300_procedures.json index 1a320321..e2387452 100644 --- a/scripts/Exaspim_ingest/output/706300_procedures.json +++ b/scripts/Exaspim_ingest/output/706300_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "706300", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-15", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "706300" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/706301_procedures.json b/scripts/Exaspim_ingest/output/706301_procedures.json index bf683f4e..3224f2aa 100644 --- a/scripts/Exaspim_ingest/output/706301_procedures.json +++ b/scripts/Exaspim_ingest/output/706301_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "706301", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-15", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "706301" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/706434_procedures.json b/scripts/Exaspim_ingest/output/706434_procedures.json index fab3ce30..1e3ee735 100644 --- a/scripts/Exaspim_ingest/output/706434_procedures.json +++ b/scripts/Exaspim_ingest/output/706434_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "706434", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-15", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "706434" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +225,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/708365_procedures.json b/scripts/Exaspim_ingest/output/708365_procedures.json index eb7110b1..5f1dcb08 100644 --- a/scripts/Exaspim_ingest/output/708365_procedures.json +++ b/scripts/Exaspim_ingest/output/708365_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "708365", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-27", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AiP1837 - MGT_E252", + "tars_identifiers": { + "virus_tars_id": "AiV1837_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5316C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300010", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5353g", + "prep_date": "2023-03-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-7x-TRE-3x-EGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300011", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5415g", + "prep_date": "2023-03-14", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "708365" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/708368_procedures.json b/scripts/Exaspim_ingest/output/708368_procedures.json index 70707496..8c909550 100644 --- a/scripts/Exaspim_ingest/output/708368_procedures.json +++ b/scripts/Exaspim_ingest/output/708368_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "708368", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-27", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E256 - AiP1836", + "tars_identifiers": { + "virus_tars_id": "AiV1836_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5315C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300010", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5353g", + "prep_date": "2023-03-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-7x-TRE-3x-EGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300011", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5415g", + "prep_date": "2023-03-14", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "708368" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/708369_procedures.json b/scripts/Exaspim_ingest/output/708369_procedures.json index 8cd16887..6fd984f3 100644 --- a/scripts/Exaspim_ingest/output/708369_procedures.json +++ b/scripts/Exaspim_ingest/output/708369_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "708369", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-27", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E256 - AiP1836", + "tars_identifiers": { + "virus_tars_id": "AiV1836_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5315C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300010", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5353g", + "prep_date": "2023-03-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-7x-TRE-3x-EGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300011", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5415g", + "prep_date": "2023-03-14", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "708369" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/708370_procedures.json b/scripts/Exaspim_ingest/output/708370_procedures.json index 5a78004d..d8a498db 100644 --- a/scripts/Exaspim_ingest/output/708370_procedures.json +++ b/scripts/Exaspim_ingest/output/708370_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "708370", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-27", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AiP1837 - MGT_E252", + "tars_identifiers": { + "virus_tars_id": "AiV1837_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5316C", + "prep_date": "2023-03-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300010", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5353g", + "prep_date": "2023-03-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-7x-TRE-3x-EGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300011", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5415g", + "prep_date": "2023-03-14", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "708370" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/708373_procedures.json b/scripts/Exaspim_ingest/output/708373_procedures.json index f05d0ec7..e0c10b4b 100644 --- a/scripts/Exaspim_ingest/output/708373_procedures.json +++ b/scripts/Exaspim_ingest/output/708373_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "708373", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-27", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AiP1791 - MGT_E255", + "tars_identifiers": { + "virus_tars_id": "AiV1791_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "GT254C", + "prep_date": "2023-08-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300010", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5353g", + "prep_date": "2023-03-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-7x-TRE-3x-EGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300011", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5415g", + "prep_date": "2023-03-14", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "708373" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/708374_procedures.json b/scripts/Exaspim_ingest/output/708374_procedures.json index 8daaf1bd..9588816e 100644 --- a/scripts/Exaspim_ingest/output/708374_procedures.json +++ b/scripts/Exaspim_ingest/output/708374_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "708374", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-27", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AiP1791 - MGT_E255", + "tars_identifiers": { + "virus_tars_id": "AiV1791_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "GT254C", + "prep_date": "2023-08-08", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300010", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5353g", + "prep_date": "2023-03-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-7x-TRE-3x-EGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300011", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5415g", + "prep_date": "2023-03-14", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "708374" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/708375_procedures.json b/scripts/Exaspim_ingest/output/708375_procedures.json index 06922223..c49199e6 100644 --- a/scripts/Exaspim_ingest/output/708375_procedures.json +++ b/scripts/Exaspim_ingest/output/708375_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "708375", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-27", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300010", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5353g", + "prep_date": "2023-03-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "eHGT_607h - CN4762", + "tars_identifiers": { + "virus_tars_id": "AiV14762_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5598C", + "prep_date": "2023-04-27", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-7x-TRE-3x-EGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300011", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5415g", + "prep_date": "2023-03-14", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "708375" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +240,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/708376_procedures.json b/scripts/Exaspim_ingest/output/708376_procedures.json index b9113269..130acebc 100644 --- a/scripts/Exaspim_ingest/output/708376_procedures.json +++ b/scripts/Exaspim_ingest/output/708376_procedures.json @@ -1,6 +1,96 @@ { "subject_id": "708376", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-10-27", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300010", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5353g", + "prep_date": "2023-03-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "eHGT_607h - CN4762", + "tars_identifiers": { + "virus_tars_id": "AiV14762_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5598C", + "prep_date": "2023-04-27", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-7x-TRE-3x-EGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "30509", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "708376" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +233,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709011_procedures.json b/scripts/Exaspim_ingest/output/709011_procedures.json index d7718a8e..c16dfa79 100644 --- a/scripts/Exaspim_ingest/output/709011_procedures.json +++ b/scripts/Exaspim_ingest/output/709011_procedures.json @@ -1,6 +1,135 @@ { "subject_id": "709011", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-06", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "injection_materials": [ + { + "material_type": "Virus", + "name": "rgAAV-Syn-FLEX-2xTRE-tTA", + "tars_identifiers": { + "virus_tars_id": null, + "plasmid_tars_alias": null, + "prep_lot_number": "VT6181g", + "prep_date": "2023-10-06", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 47500000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300003", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5046g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709011" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "21.1", + "animal_weight_post": "21.1", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 5", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "7.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.43", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.4" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -82,5 +211,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709013_procedures.json b/scripts/Exaspim_ingest/output/709013_procedures.json index f29d38ee..57c6114a 100644 --- a/scripts/Exaspim_ingest/output/709013_procedures.json +++ b/scripts/Exaspim_ingest/output/709013_procedures.json @@ -1,6 +1,135 @@ { "subject_id": "709013", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-06", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "injection_materials": [ + { + "material_type": "Virus", + "name": "rgAAV-Syn-FLEX-2xTRE-tTA", + "tars_identifiers": { + "virus_tars_id": null, + "plasmid_tars_alias": null, + "prep_lot_number": "VT6181g", + "prep_date": "2023-10-06", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 47500000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300003", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5046g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709013" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-01", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "20.0", + "animal_weight_post": "20.1", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 5", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "6.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.43", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.4" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +272,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709014_procedures.json b/scripts/Exaspim_ingest/output/709014_procedures.json index f3f03b8a..ca7d5731 100644 --- a/scripts/Exaspim_ingest/output/709014_procedures.json +++ b/scripts/Exaspim_ingest/output/709014_procedures.json @@ -37,5 +37,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709016_procedures.json b/scripts/Exaspim_ingest/output/709016_procedures.json index 14652c2f..bdde19fa 100644 --- a/scripts/Exaspim_ingest/output/709016_procedures.json +++ b/scripts/Exaspim_ingest/output/709016_procedures.json @@ -1,6 +1,135 @@ { "subject_id": "709016", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-04", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "injection_materials": [ + { + "material_type": "Virus", + "name": "rgAAV-Syn-FLEX-2xTRE-tTA", + "tars_identifiers": { + "virus_tars_id": null, + "plasmid_tars_alias": null, + "prep_lot_number": "VT6181g", + "prep_date": "2023-10-06", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 47500000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300003", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5046g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 1800000000000, + "titer_unit": "gc/mL" + } + ], + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709016" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-11-28", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "15.4", + "animal_weight_post": "15.4", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 4", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.43", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.4" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -127,5 +256,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709203_procedures.json b/scripts/Exaspim_ingest/output/709203_procedures.json index 11a7d659..05699761 100644 --- a/scripts/Exaspim_ingest/output/709203_procedures.json +++ b/scripts/Exaspim_ingest/output/709203_procedures.json @@ -1,6 +1,170 @@ { "subject_id": "709203", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-04", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-TRE-DIO-GFP-IRES-tTA Supernova", + "tars_identifiers": null, + "addgene_id": null, + "titer": 10000000000000, + "titer_unit": "gc/mL" + } + ], + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709203" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-11-28", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "20.3", + "animal_weight_post": "20.2", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60", + "duration_unit": "minute", + "level": "1.75" + }, + "workstation_id": "SWS 6", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-0.4", + "injection_coordinate_ap": "-1.6", + "injection_coordinate_depth": [ + "3.3" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.43", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.4" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +307,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709220_procedures.json b/scripts/Exaspim_ingest/output/709220_procedures.json index 56dee3db..bbae4cdd 100644 --- a/scripts/Exaspim_ingest/output/709220_procedures.json +++ b/scripts/Exaspim_ingest/output/709220_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "709220", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-29", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 5000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-03", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709220" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +207,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709221_procedures.json b/scripts/Exaspim_ingest/output/709221_procedures.json index 93308821..646b253e 100644 --- a/scripts/Exaspim_ingest/output/709221_procedures.json +++ b/scripts/Exaspim_ingest/output/709221_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "709221", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-29", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 5000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-03", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709221" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +207,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709222_procedures.json b/scripts/Exaspim_ingest/output/709222_procedures.json index abedee9e..68552751 100644 --- a/scripts/Exaspim_ingest/output/709222_procedures.json +++ b/scripts/Exaspim_ingest/output/709222_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "709222", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-29", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 5000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-03", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709222" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -132,5 +207,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709393_procedures.json b/scripts/Exaspim_ingest/output/709393_procedures.json index 5f92ae70..fe96bc5c 100644 --- a/scripts/Exaspim_ingest/output/709393_procedures.json +++ b/scripts/Exaspim_ingest/output/709393_procedures.json @@ -1,6 +1,170 @@ { "subject_id": "709393", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-14", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-TRE-DIO-GFP-IRES-tTA Supernova", + "tars_identifiers": null, + "addgene_id": null, + "titer": 10000000000000, + "titer_unit": "gc/mL" + } + ], + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709393" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-11-09", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "20.7", + "animal_weight_post": "20.8", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "56.99999999999999733546474090", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 5", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "5.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-0.4", + "injection_coordinate_ap": "-1.6", + "injection_coordinate_depth": [ + "3.3" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "200.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + }, + { + "injection_materials": [], + "recovery_time": "5.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.43", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.4" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "200.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +307,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709394_procedures.json b/scripts/Exaspim_ingest/output/709394_procedures.json index a8eb380b..5d8565f3 100644 --- a/scripts/Exaspim_ingest/output/709394_procedures.json +++ b/scripts/Exaspim_ingest/output/709394_procedures.json @@ -1,6 +1,170 @@ { "subject_id": "709394", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-11-14", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-TRE-DIO-GFP-IRES-tTA Supernova", + "tars_identifiers": null, + "addgene_id": null, + "titer": 10000000000000, + "titer_unit": "gc/mL" + } + ], + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709394" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-11-09", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "22.1", + "animal_weight_post": "22.1", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 3", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-0.4", + "injection_coordinate_ap": "-1.6", + "injection_coordinate_depth": [ + "3.3" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.43", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.4" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +307,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709838_procedures.json b/scripts/Exaspim_ingest/output/709838_procedures.json index 15a16734..767686d0 100644 --- a/scripts/Exaspim_ingest/output/709838_procedures.json +++ b/scripts/Exaspim_ingest/output/709838_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "709838", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-04", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 5000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300004", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5047g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709838" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -127,5 +209,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/709839_procedures.json b/scripts/Exaspim_ingest/output/709839_procedures.json index 0a2d95aa..12df181c 100644 --- a/scripts/Exaspim_ingest/output/709839_procedures.json +++ b/scripts/Exaspim_ingest/output/709839_procedures.json @@ -1,6 +1,88 @@ { "subject_id": "709839", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-04", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 5000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300004", + "plasmid_tars_alias": null, + "prep_lot_number": "VT5047g", + "prep_date": "2023-02-07", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "709839" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -127,5 +209,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/712226_procedures.json b/scripts/Exaspim_ingest/output/712226_procedures.json index 4d217eec..f208b1e2 100644 --- a/scripts/Exaspim_ingest/output/712226_procedures.json +++ b/scripts/Exaspim_ingest/output/712226_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "712226", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-31", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "712226" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-21", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "21.5", + "animal_weight_post": "21.4", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60.0", + "duration_unit": "minute", + "level": "1.5" + }, + "workstation_id": "SWS 2", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-0.4", + "injection_coordinate_ap": "-1.6", + "injection_coordinate_depth": [ + "3.3" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.4", + "injection_coordinate_ap": "-1.6", + "injection_coordinate_depth": [ + "3.3" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -37,5 +134,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/712228_procedures.json b/scripts/Exaspim_ingest/output/712228_procedures.json index 0241e38f..4acdf1d1 100644 --- a/scripts/Exaspim_ingest/output/712228_procedures.json +++ b/scripts/Exaspim_ingest/output/712228_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "712228", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-31", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "712228" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-21", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "18.6", + "animal_weight_post": "18.6", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "45.00", + "duration_unit": "minute", + "level": "1.75" + }, + "workstation_id": "SWS 6", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-0.4", + "injection_coordinate_ap": "-1.6", + "injection_coordinate_depth": [ + "3.3" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.4", + "injection_coordinate_ap": "-1.6", + "injection_coordinate_depth": [ + "3.3" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": null, + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "dx.doi.org/10.17504/protocols.io.bp2l6nr7kgqe/v4" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -82,5 +179,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/713600_procedures.json b/scripts/Exaspim_ingest/output/713600_procedures.json index 0c1cffc5..619a5456 100644 --- a/scripts/Exaspim_ingest/output/713600_procedures.json +++ b/scripts/Exaspim_ingest/output/713600_procedures.json @@ -1,6 +1,170 @@ { "subject_id": "713600", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-13", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-TRE-DIO-GFP-IRES-tTA Supernova", + "tars_identifiers": null, + "addgene_id": null, + "titer": 10000000000000, + "titer_unit": "gc/mL" + } + ], + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-17", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "713600" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-08", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "21.5", + "animal_weight_post": "21.6", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60", + "duration_unit": "minute", + "level": "1.3" + }, + "workstation_id": "SWS 2", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "15.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-0.4", + "injection_coordinate_ap": "-1.6", + "injection_coordinate_depth": [ + "3.3" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + }, + { + "injection_materials": [], + "recovery_time": "15.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.43", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.4" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -127,5 +291,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/713601_procedures.json b/scripts/Exaspim_ingest/output/713601_procedures.json index 1147ece7..f0ee2383 100644 --- a/scripts/Exaspim_ingest/output/713601_procedures.json +++ b/scripts/Exaspim_ingest/output/713601_procedures.json @@ -1,6 +1,170 @@ { "subject_id": "713601", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2023-12-11", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAVrg-Syn-iCre", + "tars_identifiers": { + "virus_tars_id": "AiV300043", + "plasmid_tars_alias": null, + "prep_lot_number": "221118-11", + "prep_date": "2022-11-28", + "prep_type": null, + "prep_protocol": null + }, + "addgene_id": null, + "titer": 75000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-TRE-DIO-GFP-IRES-tTA Supernova", + "tars_identifiers": null, + "addgene_id": null, + "titer": 10000000000000, + "titer_unit": "gc/mL" + } + ], + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-01-16", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "713601" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2023-12-04", + "experimenter_full_name": "NSB-90", + "iacuc_protocol": "2109", + "animal_weight_prior": "21.7", + "animal_weight_post": "21.7", + "weight_unit": "gram", + "anaesthesia": { + "type": "isoflurane", + "duration": "60", + "duration_unit": "minute", + "level": "1.75" + }, + "workstation_id": "SWS 6", + "procedures": [ + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "-0.4", + "injection_coordinate_ap": "-1.6", + "injection_coordinate_depth": [ + "3.3" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Left", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + }, + { + "injection_materials": [], + "recovery_time": "10.0", + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "injection_coordinate_ml": "0.43", + "injection_coordinate_ap": "-3.3", + "injection_coordinate_depth": [ + "4.4" + ], + "injection_coordinate_unit": "millimeter", + "injection_coordinate_reference": "Bregma", + "bregma_to_lambda_distance": null, + "bregma_to_lambda_unit": "millimeter", + "injection_angle": "0.0", + "injection_angle_unit": "degrees", + "targeted_structure": null, + "injection_hemisphere": "Right", + "procedure_type": "Nanoject injection", + "injection_volume": [ + "100.0" + ], + "injection_volume_unit": "nanoliter", + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Gelation", @@ -143,5 +307,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/715345_procedures.json b/scripts/Exaspim_ingest/output/715345_procedures.json index 0566067a..63cf3fbf 100644 --- a/scripts/Exaspim_ingest/output/715345_procedures.json +++ b/scripts/Exaspim_ingest/output/715345_procedures.json @@ -1,6 +1,96 @@ { "subject_id": "715345", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E199 / AiP1996 / GT232C", + "tars_identifiers": { + "virus_tars_id": "AiV1996_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "GT232C", + "prep_date": "2023-07-21", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-02-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "715345" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -71,5 +161,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/715346_procedures.json b/scripts/Exaspim_ingest/output/715346_procedures.json index 1baed227..c2c3b088 100644 --- a/scripts/Exaspim_ingest/output/715346_procedures.json +++ b/scripts/Exaspim_ingest/output/715346_procedures.json @@ -1,6 +1,96 @@ { "subject_id": "715346", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E199 / AiP1996 / GT232C", + "tars_identifiers": { + "virus_tars_id": "AiV1996_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "GT232C", + "prep_date": "2023-07-21", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-02-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "715346" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -37,5 +127,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/715347_procedures.json b/scripts/Exaspim_ingest/output/715347_procedures.json index d0d702e0..480f8c2f 100644 --- a/scripts/Exaspim_ingest/output/715347_procedures.json +++ b/scripts/Exaspim_ingest/output/715347_procedures.json @@ -1,6 +1,96 @@ { "subject_id": "715347", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-08", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E199 / AiP1996 / GT232C", + "tars_identifiers": { + "virus_tars_id": "AiV1996_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "GT232C", + "prep_date": "2023-07-21", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-02-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "715347" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -71,5 +161,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/717443_procedures.json b/scripts/Exaspim_ingest/output/717443_procedures.json index b441eb0d..7c291667 100644 --- a/scripts/Exaspim_ingest/output/717443_procedures.json +++ b/scripts/Exaspim_ingest/output/717443_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "717443", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-02", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E241 / AiP2015 / GT250C", + "tars_identifiers": { + "virus_tars_id": "AiV2015_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "GT250C", + "prep_date": "2023-07-25", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-02-07", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "717443" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -37,5 +134,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/717444_procedures.json b/scripts/Exaspim_ingest/output/717444_procedures.json index 382858a4..f2343c7b 100644 --- a/scripts/Exaspim_ingest/output/717444_procedures.json +++ b/scripts/Exaspim_ingest/output/717444_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "717444", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-02", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E241 / AiP2015 / GT250C", + "tars_identifiers": { + "virus_tars_id": "AiV2015_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "GT250C", + "prep_date": "2023-07-25", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-02-07", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "717444" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -82,5 +179,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/717445_procedures.json b/scripts/Exaspim_ingest/output/717445_procedures.json index 83ee0111..03698173 100644 --- a/scripts/Exaspim_ingest/output/717445_procedures.json +++ b/scripts/Exaspim_ingest/output/717445_procedures.json @@ -1,6 +1,103 @@ { "subject_id": "717445", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-02", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E241 / AiP2015 / GT250C", + "tars_identifiers": { + "virus_tars_id": "AiV2015_PHPeB", + "plasmid_tars_alias": null, + "prep_lot_number": "GT250C", + "prep_date": "2023-07-25", + "prep_type": "Crude", + "prep_protocol": "PHPeB-SOP#VC004" + }, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": { + "virus_tars_id": "AiV300022", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3212g", + "prep_date": "2022-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-02-07", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "717445" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -82,5 +179,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/717612_procedures.json b/scripts/Exaspim_ingest/output/717612_procedures.json index 569e792c..d9221273 100644 --- a/scripts/Exaspim_ingest/output/717612_procedures.json +++ b/scripts/Exaspim_ingest/output/717612_procedures.json @@ -1,6 +1,66 @@ { "subject_id": "717612", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-26", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB-TRE-DIO-MORF-IRES-tTA", + "tars_identifiers": null, + "addgene_id": null, + "titer": 100000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-03-08", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "717612" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -21,5 +81,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/717614_procedures.json b/scripts/Exaspim_ingest/output/717614_procedures.json index ce1ec4c5..690a81ae 100644 --- a/scripts/Exaspim_ingest/output/717614_procedures.json +++ b/scripts/Exaspim_ingest/output/717614_procedures.json @@ -1,6 +1,89 @@ { "subject_id": "717614", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-26", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB-TRE-DIO-MORF-IRES-tTA", + "tars_identifiers": null, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_TREx7-3xGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-03-08", + "experimenter_full_name": "30333", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "717614" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -21,5 +104,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/717984_procedures.json b/scripts/Exaspim_ingest/output/717984_procedures.json index 630fb018..6f156338 100644 --- a/scripts/Exaspim_ingest/output/717984_procedures.json +++ b/scripts/Exaspim_ingest/output/717984_procedures.json @@ -21,5 +21,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/718162_procedures.json b/scripts/Exaspim_ingest/output/718162_procedures.json index f0e98472..af734b33 100644 --- a/scripts/Exaspim_ingest/output/718162_procedures.json +++ b/scripts/Exaspim_ingest/output/718162_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "718162", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-31", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-03-06", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "718162" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -37,5 +112,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/718168_procedures.json b/scripts/Exaspim_ingest/output/718168_procedures.json index 89499080..7de72638 100644 --- a/scripts/Exaspim_ingest/output/718168_procedures.json +++ b/scripts/Exaspim_ingest/output/718168_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "718168", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-31", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-03-06", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "718168" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -37,5 +112,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/719179_procedures.json b/scripts/Exaspim_ingest/output/719179_procedures.json index f46ee37f..ca88689f 100644 --- a/scripts/Exaspim_ingest/output/719179_procedures.json +++ b/scripts/Exaspim_ingest/output/719179_procedures.json @@ -21,5 +21,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/719652_procedures.json b/scripts/Exaspim_ingest/output/719652_procedures.json index d15e31ff..79c538c9 100644 --- a/scripts/Exaspim_ingest/output/719652_procedures.json +++ b/scripts/Exaspim_ingest/output/719652_procedures.json @@ -1,6 +1,89 @@ { "subject_id": "719652", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E265", + "tars_identifiers": null, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-02-14", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "719652" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -71,5 +154,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/719654_procedures.json b/scripts/Exaspim_ingest/output/719654_procedures.json index 7f0cfdd2..d85a28af 100644 --- a/scripts/Exaspim_ingest/output/719654_procedures.json +++ b/scripts/Exaspim_ingest/output/719654_procedures.json @@ -1,6 +1,89 @@ { "subject_id": "719654", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-01-10", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "MGT_E265", + "tars_identifiers": null, + "addgene_id": null, + "titer": 50000000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "PhP.EB-Syn-Flex-TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300024", + "plasmid_tars_alias": null, + "prep_lot_number": "VT3214g", + "prep_date": "2023-02-04", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-tDTomato", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-02-14", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "719654" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -71,5 +154,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/720164_procedures.json b/scripts/Exaspim_ingest/output/720164_procedures.json index 3ff159f9..1c394726 100644 --- a/scripts/Exaspim_ingest/output/720164_procedures.json +++ b/scripts/Exaspim_ingest/output/720164_procedures.json @@ -1,6 +1,73 @@ { "subject_id": "720164", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-02-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-03-18", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "720164" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -21,5 +88,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/720165_procedures.json b/scripts/Exaspim_ingest/output/720165_procedures.json index 4768ddce..aebbbea3 100644 --- a/scripts/Exaspim_ingest/output/720165_procedures.json +++ b/scripts/Exaspim_ingest/output/720165_procedures.json @@ -1,6 +1,73 @@ { "subject_id": "720165", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-02-12", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 10000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-03-18", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "720165" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -21,5 +88,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/721056_procedures.json b/scripts/Exaspim_ingest/output/721056_procedures.json index f51c8cc7..d4f32149 100644 --- a/scripts/Exaspim_ingest/output/721056_procedures.json +++ b/scripts/Exaspim_ingest/output/721056_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "721056", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-02-16", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 50000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-03-22", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "721056" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -21,5 +96,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file diff --git a/scripts/Exaspim_ingest/output/721059_procedures.json b/scripts/Exaspim_ingest/output/721059_procedures.json index 21edadd1..ad3cb17d 100644 --- a/scripts/Exaspim_ingest/output/721059_procedures.json +++ b/scripts/Exaspim_ingest/output/721059_procedures.json @@ -1,6 +1,81 @@ { "subject_id": "721059", - "subject_procedures": [], + "subject_procedures": [ + { + "procedure_type": "Surgery", + "start_date": "2024-02-16", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "recovery_time": null, + "recovery_time_unit": "minute", + "injection_duration": null, + "injection_duration_unit": "minute", + "instrument_id": null, + "procedure_type": "Retro-orbital injection", + "injection_volume": null, + "injection_volume_unit": "microliter", + "injection_eye": null, + "injection_materials": [ + { + "material_type": "Virus", + "name": "AAV-PHP-eB_Syn-Flex TRE-2tTA", + "tars_identifiers": { + "virus_tars_id": "AiV300000", + "plasmid_tars_alias": null, + "prep_lot_number": "VT4358g", + "prep_date": "2022-09-23", + "prep_type": "Purified", + "prep_protocol": "SOP#VC003" + }, + "addgene_id": null, + "titer": 50000000000, + "titer_unit": "gc/mL" + }, + { + "material_type": "Virus", + "name": "AAV-PHP-eB_7x-TRE-3xGFP", + "tars_identifiers": null, + "addgene_id": null, + "titer": 18000000000000, + "titer_unit": "gc/mL" + } + ], + "protocol_id": "unknown" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + }, + { + "procedure_type": "Surgery", + "start_date": "2024-03-22", + "experimenter_full_name": "13040", + "iacuc_protocol": "2109", + "animal_weight_prior": null, + "animal_weight_post": null, + "weight_unit": "gram", + "anaesthesia": null, + "workstation_id": null, + "procedures": [ + { + "procedure_type": "Perfusion", + "output_specimen_ids": [ + "721059" + ], + "protocol_id": "dx.doi.org/10.17504/protocols.io.bg5vjy66" + } + ], + "notes": null, + "protocol_id": "dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v1" + } + ], "specimen_procedures": [ { "procedure_type": "Delipidation", @@ -21,5 +96,5 @@ ], "notes": "test build model", "describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py", - "schema_version": "0.13.7" + "schema_version": "0.13.8" } \ No newline at end of file From 98b1292ffce16649dfd5dda2ef4686ec05e9e5c5 Mon Sep 17 00:00:00 2001 From: Mae Moninghoff Date: Thu, 30 May 2024 16:16:24 -0400 Subject: [PATCH 42/43] fixing materials ingest --- .../Exaspim_ingest/ExM Sample Tracking.xlsx | Bin 80545 -> 69007 bytes scripts/Exaspim_ingest/ingest_exaspim.ipynb | 1443 +------------ .../ingest_exaspim_materials.ipynb | 1821 +++++------------ .../609105_procedures.json | 8 - .../609107_procedures.json | 8 - .../609281_procedures.json | 8 - .../613814_procedures.json | 8 - .../614978_procedures.json | 8 - .../614980_procedures.json | 8 - .../615296_procedures.json | 8 - .../618583_procedures.json | 8 - .../618584_procedures.json | 8 - .../648077_procedures.json | 15 - .../648079_procedures.json | 15 - .../648434_procedures.json | 15 - .../648435_procedures.json | 15 - .../648436_procedures.json | 15 - .../648695_procedures.json | 15 - .../648696_procedures.json | 15 - .../648697_procedures.json | 15 - .../648698_procedures.json | 15 - .../648699_procedures.json | 15 - .../648700_procedures.json | 15 - .../648858_procedures.json | 15 - .../648860_procedures.json | 15 - .../648861_procedures.json | 15 - .../648862_procedures.json | 15 - .../650008_procedures.json | 15 - .../650009_procedures.json | 15 - .../650010_procedures.json | 15 - .../650011_procedures.json | 15 - .../651305_procedures.json | 15 - .../651895_procedures.json | 15 - .../651897_procedures.json | 15 - .../652441_procedures.json | 15 - .../652445_procedures.json | 15 - .../652779_procedures.json | 15 - .../652781_procedures.json | 15 - .../653153_procedures.json | 15 - .../653158_procedures.json | 15 - .../653159_procedures.json | 15 - .../653980_procedures.json | 15 - .../653981_procedures.json | 15 - .../654306_procedures.json | 15 - .../654308_procedures.json | 15 - .../654727_procedures.json | 15 - .../657676_procedures.json | 15 - .../659146_procedures.json | 15 - .../660949_procedures.json | 15 - .../660950_procedures.json | 15 - .../661300_procedures.json | 15 - .../664761_procedures.json | 15 - .../665081_procedures.json | 15 - 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